Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44731 | Canola | cytosol | 100.0 | 100.0 |
| CDX73995 | Canola | cytosol | 96.13 | 94.57 |
| CDY22204 | Canola | cytosol | 95.58 | 94.02 |
| CDY41313 | Canola | cytosol | 95.58 | 94.02 |
| CDX75151 | Canola | cytosol | 90.61 | 90.61 |
| CDY36196 | Canola | cytosol | 90.06 | 90.06 |
| PGSC0003DMT400006628 | Potato | cytosol | 75.69 | 74.46 |
| VIT_09s0002g01710.t01 | Wine grape | cytosol | 75.14 | 74.32 |
| Solyc03g121800.2.1 | Tomato | plastid | 75.14 | 73.91 |
| KRH44115 | Soybean | cytosol | 72.93 | 73.33 |
| KRH23291 | Soybean | endoplasmic reticulum | 72.93 | 72.93 |
| CDY07940 | Canola | cytosol | 95.58 | 72.38 |
| PGSC0003DMT400083870 | Potato | cytosol | 72.38 | 71.58 |
| Solyc12g044910.1.1 | Tomato | cytosol | 72.38 | 71.58 |
| KXG35813 | Sorghum | cytosol | 70.72 | 70.33 |
| Os02t0317400-01 | Rice | cytosol | 70.72 | 70.33 |
| TraesCS5D01G173000.1 | Wheat | cytosol | 69.61 | 69.23 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 69.06 | 68.68 |
| AT3G09800.6 | Thale cress | cytosol | 93.37 | 65.25 |
| Zm00001d020783_P005 | Maize | mitochondrion | 71.82 | 64.04 |
| KRH47095 | Soybean | endoplasmic reticulum | 65.19 | 62.77 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 69.06 | 55.56 |
| CDY44831 | Canola | cytosol, mitochondrion | 67.4 | 52.14 |
| CDY12879 | Canola | mitochondrion | 68.51 | 52.1 |
| Os09t0251450-00 | Rice | extracellular | 18.78 | 41.46 |
Protein Annotations
| EnsemblPlants:CDY41585 | EnsemblPlantsGene:GSBRNA2T00073231001 | Gene3D:3.30.450.60 | GO:A0A078I4C5 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf |
| PANTHER:PTHR11043 | PANTHER:PTHR11043:SF8 | PFAM:PF01217 | ProteinID:CDY41585 | ProteinID:CDY41585.1 | ProteinID:CDY44731.1 |
| SUPFAM:SSF64356 | UniParc:UPI0004EB3D50 | UniProt:A0A078I4C5 | MapMan:22.3.1.4.4 | : | : |
Description
BnaC05g43220DBnaA05g28750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4C5]
Coordinates
chrLK032501:+:81835..83961
Molecular Weight (calculated)
19927.7 Da
IEP (calculated)
4.319
GRAVY (calculated)
0.015
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGTHDSCPL VKNILLLDSE GKRVAVKYYS DDWATNAAKL SFEKYVFSKT SKTNARTEAE ITLLDSNIIV YKFAQDLHFF VTGGDDENEL VLSSVLQGFF
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGVVLETD PNVIAGKVAM QSTEASGSLS EQTLTQALAT AREHLARSLL T
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGVVLETD PNVIAGKVAM QSTEASGSLS EQTLTQALAT AREHLARSLL T
001: MAGTNDSCPL VKNILLLDSE GKRVAVKYYS DDWATNASKL AFEKYVFSKT SKTNARTEAE ITLLESNIVV YKFAQDLHFF VTGGENENEL VLSSVLQGFF
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
Arabidopsis Description
Coatomer subunit zeta-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.