Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73995 | Canola | cytosol | 76.57 | 99.46 |
| CDY22204 | Canola | cytosol | 74.06 | 96.2 |
| CDY41313 | Canola | cytosol | 74.06 | 96.2 |
| CDY41585 | Canola | cytosol | 72.38 | 95.58 |
| CDY44731 | Canola | cytosol | 72.38 | 95.58 |
| CDX75151 | Canola | cytosol | 66.95 | 88.4 |
| CDY36196 | Canola | cytosol | 66.53 | 87.85 |
| PGSC0003DMT400006628 | Potato | cytosol | 57.32 | 74.46 |
| Solyc03g121800.2.1 | Tomato | plastid | 56.9 | 73.91 |
| KRH44115 | Soybean | cytosol | 54.81 | 72.78 |
| VIT_09s0002g01710.t01 | Wine grape | cytosol | 55.65 | 72.68 |
| KRH23291 | Soybean | endoplasmic reticulum | 53.97 | 71.27 |
| PGSC0003DMT400083870 | Potato | cytosol | 54.39 | 71.04 |
| Solyc12g044910.1.1 | Tomato | cytosol | 54.39 | 71.04 |
| KXG35813 | Sorghum | cytosol | 52.72 | 69.23 |
| TraesCS5D01G173000.1 | Wheat | cytosol | 52.3 | 68.68 |
| Os02t0317400-01 | Rice | cytosol | 52.3 | 68.68 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 51.88 | 68.13 |
| AT3G09800.6 | Thale cress | cytosol | 72.8 | 67.18 |
| Zm00001d020783_P005 | Maize | mitochondrion | 53.97 | 63.55 |
| KRH47095 | Soybean | endoplasmic reticulum | 48.95 | 62.23 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 51.88 | 55.11 |
| CDY44831 | Canola | cytosol, mitochondrion | 51.88 | 52.99 |
| CDY12879 | Canola | mitochondrion | 52.72 | 52.94 |
| Os09t0251450-00 | Rice | extracellular | 14.23 | 41.46 |
Protein Annotations
| EnsemblPlants:CDY07940 | EnsemblPlantsGene:GSBRNA2T00125144001 | Gene3D:3.30.450.60 | GO:A0A078F0H5 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf |
| PANTHER:PTHR11043 | PANTHER:PTHR11043:SF8 | PFAM:PF01217 | ProteinID:CDY07940 | ProteinID:CDY07940.1 | SUPFAM:SSF64356 |
| UniParc:UPI0004EF382B | UniProt:A0A078F0H5 | MapMan:22.3.1.4.4 | : | : | : |
Description
BnaC03g35830DBnaC03g35830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F0H5]
Coordinates
chrLK031982:-:209369..211544
Molecular Weight (calculated)
26487.6 Da
IEP (calculated)
4.427
GRAVY (calculated)
0.011
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSMSVWGDD HRWIPQLGYC LDDDAMWICS DCLLSFITPF RGKAAGTESM TINSTMSGFH GTHDSCPLVK NILLLDSEGK RVAVKYYSDD WPTHAAKLTF
101: EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELVL SSVLQGFFDA VALLLRNNVE KMDALENLDL IFLCLDEMVD QGVVLETDPN
201: VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELVL SSVLQGFFDA VALLLRNNVE KMDALENLDL IFLCLDEMVD QGVVLETDPN
201: VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.