Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G389200.1 | Wheat | cytosol | 81.36 | 81.36 |
| TraesCS3A01G356400.1 | Wheat | cytosol | 80.79 | 80.79 |
| TraesCS3D01G350400.1 | Wheat | cytosol | 79.1 | 79.1 |
| HORVU3Hr1G086720.1 | Barley | cytosol | 58.76 | 75.36 |
| GSMUA_Achr9P01690_001 | Banana | cytosol | 74.58 | 74.16 |
| Os05t0461000-01 | Rice | cytosol | 74.01 | 74.01 |
| Os02t0317400-01 | Rice | cytosol | 68.93 | 67.03 |
| HORVU3Hr1G086750.1 | Barley | mitochondrion | 81.92 | 65.02 |
| HORVU3Hr1G086800.1 | Barley | cytosol, plastid | 27.68 | 44.14 |
| Os09t0251450-00 | Rice | extracellular | 19.77 | 42.68 |
Protein Annotations
| MapMan:22.3.1.4.4 | Gene3D:3.30.450.60 | EntrezGene:4327378 | EMBL:AK066366 | EMBL:AK073775 | InterPro:AP_mu_sigma_su |
| ProteinID:BAD81696.1 | ProteinID:BAF06662.2 | ProteinID:BAS75136.1 | ProteinID:BAS75137.1 | GO:GO:0000139 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030663 | GO:GO:0031410 | InterPro:Longin-like_dom_sf |
| EnsemblPlantsGene:Os01g0838800 | EnsemblPlants:Os01t0838800-02 | PFAM:PF01217 | PANTHER:PTHR11043 | PANTHER:PTHR11043:SF17 | UniProt:Q5NA06 |
| SUPFAM:SSF64356 | UniParc:UPI000049E84D | RefSeq:XP_015622411.1 | : | : | : |
Description
Similar to cDNA clone:J033065F01, full insert sequence (Fragment). (Os01t0838800-01);Clathrin adaptor, sigma subunit/coatomer, zeta subunit domain containing protein. (Os01t0838800-02)
Coordinates
chr1:+:35981654..35984124
Molecular Weight (calculated)
19679.4 Da
IEP (calculated)
4.784
GRAVY (calculated)
-0.032
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MESCPSVKNI LVLDSEGKRV AVKYYSDDWP SLSSKQAFEK SVFAKTQKTS ARTEAEIVMF DSYFVVYKFI QDLHFFVTGG DEENELILAS VLQGFSEAID
101: YLLRNKVHRR AALENLDLIF LCLDEVVDGG IVLETDAKAI LEKVSGHGLE GSGSLTEQKL SSALATAREH FARSIFS
101: YLLRNKVHRR AALENLDLIF LCLDEVVDGG IVLETDAKAI LEKVSGHGLE GSGSLTEQKL SSALATAREH FARSIFS
001: MAGTNDSCPL VKNILLLDSE GKRVAVKYYS DDWATNASKL AFEKYVFSKT SKTNARTEAE ITLLESNIVV YKFAQDLHFF VTGGENENEL VLSSVLQGFF
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
Arabidopsis Description
Coatomer subunit zeta-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.