Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0461000-01 | Rice | cytosol | 80.9 | 81.36 |
| Zm00001d038378_P001 | Maize | cytosol, extracellular | 78.65 | 79.55 |
| TraesCS3B01G389200.1 | Wheat | cytosol | 78.65 | 79.1 |
| TraesCS3A01G356400.1 | Wheat | cytosol | 78.09 | 78.53 |
| TraesCS1A01G286000.1 | Wheat | cytosol | 77.53 | 77.97 |
| TraesCS1D01G285100.1 | Wheat | cytosol | 78.09 | 75.54 |
| TraesCS3D01G350400.1 | Wheat | cytosol | 74.72 | 75.14 |
| TraesCS1B01G295500.1 | Wheat | cytosol | 77.53 | 75.0 |
| HORVU3Hr1G086720.1 | Barley | cytosol | 57.87 | 74.64 |
| Os01t0838800-02 | Rice | cytosol | 74.16 | 74.58 |
| Zm00001d010537_P001 | Maize | cytosol | 77.53 | 71.5 |
| GSMUA_Achr7P15270_001 | Banana | cytosol, mitochondrion | 87.64 | 68.42 |
| HORVU3Hr1G086750.1 | Barley | mitochondrion | 78.09 | 62.33 |
| KXG22166 | Sorghum | cytosol | 79.21 | 52.22 |
| HORVU3Hr1G086800.1 | Barley | cytosol, plastid | 24.16 | 38.74 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P01690_001 | EnsemblPlants:GSMUA_Achr9T01690_001 | EnsemblPlantsGene:GSMUA_Achr9G01690_001 | Gene3D:3.30.450.60 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf |
| PANTHER:PTHR11043 | PANTHER:PTHR11043:SF5 | PFAM:PF01217 | SEG:seg | SUPFAM:SSF64356 | UniParc:UPI0002959E31 |
| UniProt:M0TWM6 | MapMan:22.3.1.4.4 | : | : | : | : |
Description
Coatomer subunit zeta-1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G01690_001]
Coordinates
chr9:+:1316764..1322716
Molecular Weight (calculated)
19595.6 Da
IEP (calculated)
4.528
GRAVY (calculated)
0.128
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDSCPSIKN ILLLDSEGKR VAVKYYSDDW PTLSAKLAFE KSVFTKTQKT NARTEAEIVM FDGYIVVYKF IQDLHFFVTG GDDENELILA TVLQGFFDAV
101: GLLLRNNVDK RTALENLDLI LLCLDEIIDG GIILETEASI IAGKVATHGL DGAASLSEQT ITQALATARE HLARSLLK
101: GLLLRNNVDK RTALENLDLI LLCLDEIIDG GIILETEASI IAGKVATHGL DGAASLSEQT ITQALATARE HLARSLLK
001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.