Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G285100.1 | Wheat | cytosol | 98.91 | 98.91 |
| TraesCS1A01G286000.1 | Wheat | cytosol | 94.57 | 98.31 |
| Os05t0461000-01 | Rice | cytosol | 87.5 | 90.96 |
| Zm00001d038378_P001 | Maize | cytosol, extracellular | 80.43 | 84.09 |
| TraesCS3B01G389200.1 | Wheat | cytosol | 76.09 | 79.1 |
| GSMUA_Achr9P01690_001 | Banana | cytosol | 75.0 | 77.53 |
| Zm00001d010537_P001 | Maize | cytosol | 79.35 | 75.65 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 65.22 | 65.93 |
| KXG22166 | Sorghum | cytosol | 82.07 | 55.93 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G295500.1 | EnsemblPlantsGene:TraesCS1B01G295500 | Gene3D:3.30.450.60 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf | PANTHER:PTHR11043 |
| PANTHER:PTHR11043:SF5 | PFAM:PF01217 | SEG:seg | SUPFAM:SSF64356 | MapMan:22.3.1.4.4 | : |
Description
No Description!
Coordinates
chr1B:-:513483369..513485801
Molecular Weight (calculated)
20104.1 Da
IEP (calculated)
4.418
GRAVY (calculated)
0.194
Length
184 amino acids
Sequence
(BLAST)
(BLAST)
001: MRHSSSSLET CPSVKNILLL DSEGKRVAVK YYTDDWPVLS AKLAFEKSVF VKTQKASSGA EAEIVMFDGQ IVVYKFIQDL HFFVTGGDED NELILASVLQ
101: GFADAIDIIL RNNVDKRTAL ENLDLILLCL DEIVDGGIVL ETEGSVIAEK VLAHGAEGTT SIAEQTIVQA LTTAREHFAK SLLM
101: GFADAIDIIL RNNVDKRTAL ENLDLILLCL DEIVDGGIVL ETEGSVIAEK VLAHGAEGTT SIAEQTIVQA LTTAREHFAK SLLM
001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.