CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038378_P001	Maize	cytosol, extracellular	64.07	98.3
Zm00001d010537_P001	Maize	cytosol	63.33	88.6
Os05t0461000-01	Rice	cytosol	57.04	87.01
TraesCS1A01G286000.1	Wheat	cytosol	55.93	85.31
TraesCS1D01G285100.1	Wheat	cytosol	56.67	83.15
TraesCS1B01G295500.1	Wheat	cytosol	55.93	82.07
GSMUA_Achr9P01690_001	Banana	cytosol	52.22	79.21
KXG35813	Sorghum	cytosol	45.56	67.58

Protein Annotations

EnsemblPlants:KXG22166	EnsemblPlantsGene:SORBI_3009G164500	Gene3D:3.30.450.60	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	InterPro:AP_mu_sigma_su	InterPro:Longin-like_dom_sf	PANTHER:PTHR11043
PANTHER:PTHR11043:SF5	PFAM:PF01217	ProteinID:KXG22166	ProteinID:KXG22166.1	SEG:seg	SUPFAM:SSF64356
UniParc:UPI00081AC3C5	UniProt:A0A1B6P937	MapMan:22.3.1.4.4	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:52074075..52076967

Molecular Weight (calculated)

29947.9 Da

IEP (calculated)

7.408

GRAVY (calculated)

-0.273

Length

270 amino acids

Sequence
(BLAST)

001: MNEIVETRPK AETGRRPSMA NTRRDSVGRT CKPNVDWATA TCHCHRGTTY RLRFCFVSSA RRLRLPHLAL RYCRGCPESR PPSSAPRPSS SPPAMETCPS
101: VKNILLLDSE GKRVAVKYYS DDWPTLSAKL AFEKSVFAKT QKANAGTEAE IVMFDGQIVV YKFIQDLHFF VTGGEEENEL ILASVLQGFS DAVERLLKNM
201: VDKRTALENL DLILLCLDEI VDGGIVLETE GREIAEKVSG HGLEGASSAE QTLVNALTQA REHFAKSLLM

Best Arabidopsis Sequence Match ( AT3G09800.6 )
(BLAST)

001: MFLNGHGQMN RISINYKNRS DEIKHSDPDK QCDTETAKGA LSHSEAISSV STILRFSHLN PPIHYFFSDL LFRYISSLTT MSPDSCPLVK KILLLDSEGK
101: RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA VALLLRSNVE KMEALENLDL
201: IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT

Arabidopsis Description

SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.