Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038378_P001 | Maize | cytosol, extracellular | 87.05 | 95.45 |
| Os05t0461000-01 | Rice | cytosol | 78.76 | 85.88 |
| TraesCS1A01G286000.1 | Wheat | cytosol | 76.17 | 83.05 |
| TraesCS1D01G285100.1 | Wheat | cytosol | 76.17 | 79.89 |
| TraesCS1B01G295500.1 | Wheat | cytosol | 75.65 | 79.35 |
| GSMUA_Achr9P01690_001 | Banana | cytosol | 71.5 | 77.53 |
| KXG22166 | Sorghum | cytosol | 88.6 | 63.33 |
| Zm00001d020783_P005 | Maize | mitochondrion | 63.21 | 60.1 |
Protein Annotations
| EnsemblPlants:Zm00001d010537_P001 | EnsemblPlants:Zm00001d010537_T001 | EnsemblPlantsGene:Zm00001d010537 | EntrezGene:100274110 | Gene3D:3.30.450.60 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su |
| InterPro:Longin-like_dom_sf | PANTHER:PTHR11043 | PANTHER:PTHR11043:SF5 | PFAM:PF01217 | ProteinID:AQK94274.1 | SEG:seg |
| SUPFAM:SSF64356 | UniParc:UPI0008423773 | UniProt:A0A1D6FRR0 | MapMan:22.3.1.4.4 | : | : |
Description
Coatomer subunit zeta-1
Coordinates
chr8:-:119697753..119699902
Molecular Weight (calculated)
21180.3 Da
IEP (calculated)
4.363
GRAVY (calculated)
0.013
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: METFPSVKNI LLLDSEGKRV AVKYYSDGWP TLSAKLAFEK SVFAKTQKAN AGTDGNLHLI SLNTEELFST DAEIVMFDGQ IVVYKFIQDL HFFVTGGEEE
101: NELILASVLQ GFSDAVERLL KNMVDKRTAL ENLDLILLCL DEIVDGGIVL ETEGREIAEK VSGHGSEGAS SAEQTLVNAL TQAREHLAKS LLM
101: NELILASVLQ GFSDAVERLL KNMVDKRTAL ENLDLILLCL DEIVDGGIVL ETEGREIAEK VSGHGSEGAS SAEQTLVNAL TQAREHLAKS LLM
001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.