Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G389200.1 | Wheat | cytosol | 49.55 | 31.07 |
| TraesCS3D01G350400.1 | Wheat | cytosol | 48.65 | 30.51 |
| TraesCS3A01G356400.1 | Wheat | cytosol | 47.75 | 29.94 |
| HORVU3Hr1G086750.1 | Barley | mitochondrion | 57.66 | 28.7 |
| Os01t0838800-02 | Rice | cytosol | 44.14 | 27.68 |
| GSMUA_Achr9P01690_001 | Banana | cytosol | 38.74 | 24.16 |
| HORVU3Hr1G086720.1 | Barley | cytosol | 7.21 | 5.8 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G086800.1 | EnsemblPlantsGene:HORVU3Hr1G086800 | Gene3D:3.30.450.60 | PANTHER:PTHR11043 | PANTHER:PTHR11043:SF17 | SEG:seg |
| UniParc:UPI000B481082 | UniProt:A0A287M3I0 | MapMan:22.3.1.4.4 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:619010795..619011590
Molecular Weight (calculated)
12515.0 Da
IEP (calculated)
11.165
GRAVY (calculated)
-0.565
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: PSLGLRSHSS SRPIPPARRR SSRPRRPRIR PPPLDMAPCP SVKNILVLDA EGKRVAVKYY ADDWPSASSK MAFEKSLFVK TQKTSARAEG EFAFLKDEES
101: VPFFTVSALR W
101: VPFFTVSALR W
001: MAGTNDSCPL VKNILLLDSE GKRVAVKYYS DDWATNASKL AFEKYVFSKT SKTNARTEAE ITLLESNIVV YKFAQDLHFF VTGGENENEL VLSSVLQGFF
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
Arabidopsis Description
Coatomer subunit zeta-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.