Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G389200.1 | Wheat | cytosol | 77.13 | 97.18 |
| TraesCS3A01G356400.1 | Wheat | cytosol | 76.68 | 96.61 |
| HORVU3Hr1G086720.1 | Barley | cytosol | 56.95 | 92.03 |
| TraesCS3D01G350400.1 | Wheat | cytosol | 72.65 | 91.53 |
| Os01t0838800-02 | Rice | cytosol | 65.02 | 81.92 |
| GSMUA_Achr9P01690_001 | Banana | cytosol | 62.33 | 78.09 |
| HORVU3Hr1G086800.1 | Barley | cytosol, plastid | 28.7 | 57.66 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G086750.1 | EnsemblPlantsGene:HORVU3Hr1G086750 | Gene3D:3.30.450.60 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf | PANTHER:PTHR11043 |
| PANTHER:PTHR11043:SF17 | PFAM:PF01217 | SUPFAM:SSF64356 | UniParc:UPI000B47BF76 | UniProt:A0A287M3F9 | MapMan:22.3.1.4.4 |
Description
No Description!
Coordinates
chrchr3H:-:618833370..618836531
Molecular Weight (calculated)
24040.9 Da
IEP (calculated)
5.353
GRAVY (calculated)
0.074
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: VVIIDLRPGR RPPLACARTA AAGQSLRHAV ARPAPGARES VLPPLDMAPC PSVKNILVLD AEGKRVAVKY YADDWPSASS KMAFEKSLFV KTQKTSARAE
101: ADVVMFDGYI VVYKFIQDLH FFVTGGDEEN ELILASVLQG FSDAVGVLLR NNVDKRTALE NLDLIFLCLD EVVDGGIVLE TDGNAIAEKV SGHGLEGAGS
201: FTEQTISQAL ATAREHFARS LLK
101: ADVVMFDGYI VVYKFIQDLH FFVTGGDEEN ELILASVLQG FSDAVGVLLR NNVDKRTALE NLDLIFLCLD EVVDGGIVLE TDGNAIAEKV SGHGLEGAGS
201: FTEQTISQAL ATAREHFARS LLK
001: MAGTNDSCPL VKNILLLDSE GKRVAVKYYS DDWATNASKL AFEKYVFSKT SKTNARTEAE ITLLESNIVV YKFAQDLHFF VTGGENENEL VLSSVLQGFF
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
101: DAVALLLRNN VEKMEALENL DLIFLCLDEM VDQGMVLETD ANVIAGKVAM QSAEASGSLS EQTLTQALAT AREHLARSLL T
Arabidopsis Description
Coatomer subunit zeta-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1F4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.