Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G389200.1 | Wheat | cytosol | 98.31 | 98.31 |
| TraesCS3D01G350400.1 | Wheat | cytosol | 92.66 | 92.66 |
| HORVU3Hr1G086720.1 | Barley | cytosol | 70.62 | 90.58 |
| Os01t0838800-02 | Rice | cytosol | 80.79 | 80.79 |
| TraesCS1A01G286000.1 | Wheat | cytosol | 78.53 | 78.53 |
| GSMUA_Achr9P01690_001 | Banana | cytosol | 78.53 | 78.09 |
| HORVU3Hr1G086750.1 | Barley | mitochondrion | 96.61 | 76.68 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 71.75 | 56.44 |
| HORVU3Hr1G086800.1 | Barley | cytosol, plastid | 29.94 | 47.75 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G356400.1 | EnsemblPlantsGene:TraesCS3A01G356400 | Gene3D:3.30.450.60 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf | PANTHER:PTHR11043 |
| PANTHER:PTHR11043:SF17 | PFAM:PF01217 | SUPFAM:SSF64356 | MapMan:22.3.1.4.4 | : | : |
Description
No Description!
Coordinates
chr3A:+:603925838..603928428
Molecular Weight (calculated)
19249.0 Da
IEP (calculated)
4.536
GRAVY (calculated)
0.125
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSCPSVKNI LVLDAEGKRV AVKYYADDWP SAASKLAFEK SLFVKTQKTS ARAEADVVMF DGYIIVYKFI QDLHFFVTGG DEENELILAS VLQGFSDAVG
101: VLLRNNVDKR TALENLDLIF LCLDEVVDGG IVLETDGNVI AEKVSGHGLE GAGSFTEQTI SQALATAREH FARSLLK
101: VLLRNNVDKR TALENLDLIF LCLDEVVDGG IVLETDGNVI AEKVSGHGLE GAGSFTEQTI SQALATAREH FARSLLK
001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.