Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plasma membrane 1
- plastid 2
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071170.2.1 | Tomato | plastid | 77.0 | 87.01 |
| KRH11718 | Soybean | endoplasmic reticulum | 77.0 | 86.03 |
| KRH36712 | Soybean | endoplasmic reticulum | 77.0 | 86.03 |
| PGSC0003DMT400007924 | Potato | cytosol | 76.0 | 85.88 |
| VIT_09s0002g01710.t01 | Wine grape | cytosol | 75.0 | 81.97 |
| AT1G60970.1 | Thale cress | cytosol | 72.0 | 81.36 |
| Bra027107.1-P | Field mustard | cytosol | 71.0 | 80.23 |
| Os02t0317400-01 | Rice | cytosol | 69.0 | 75.82 |
| KXG35813 | Sorghum | cytosol | 68.5 | 75.27 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 68.0 | 74.73 |
| TraesCS5D01G173000.1 | Wheat | cytosol | 67.5 | 74.18 |
| Zm00001d020783_P005 | Maize | mitochondrion | 70.0 | 68.97 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 68.0 | 60.44 |
| CDY12879 | Canola | mitochondrion | 71.5 | 60.08 |
| CDY44831 | Canola | cytosol, mitochondrion | 69.5 | 59.4 |
| Os09t0251450-00 | Rice | extracellular | 19.0 | 46.34 |
Protein Annotations
| EntrezGene:100260697 | wikigene:100260697 | MapMan:22.3.1.4.4 | Gene3D:3.30.450.60 | InterPro:AP_mu_sigma_su | ProteinID:CBI30821 |
| ProteinID:CBI30821.3 | UniProt:D7TJZ9 | EMBL:FN595992 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | EntrezGene:LOC100260697 | wikigene:LOC100260697 | InterPro:Longin-like_dom_sf |
| PFAM:PF01217 | PANTHER:PTHR11043 | PANTHER:PTHR11043:SF8 | SUPFAM:SSF64356 | TIGR:TC56662 | UniParc:UPI0001BE39AF |
| ArrayExpress:VIT_10s0003g02760 | EnsemblPlantsGene:VIT_10s0003g02760 | EnsemblPlants:VIT_10s0003g02760.t01 | RefSeq:XP_002273766 | RefSeq:XP_002273766.1 | SEG:seg |
Description
No Description!
Coordinates
chr10:-:4846800..4851534
Molecular Weight (calculated)
22028.4 Da
IEP (calculated)
4.934
GRAVY (calculated)
-0.064
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MIWGKVKIAH GISRTNFPAK PSNMESCPSV KNILLLDSEG KRVAVKYYCD DWPTNNAKET FEKSVFSKTQ KTNARTEAEI AMFENNIVVY KFVQDLHFFV
101: TGGEDENELI LATVLQGFFD AVGLLLRGNV DKKEALENLD LILLCLDEII DGGIVLETDA NVIAGKVASH SLDSGAPLSE QTISQALATA REHLARSLLK
101: TGGEDENELI LATVLQGFFD AVGLLLRGNV DKKEALENLD LILLCLDEII DGGIVLETDA NVIAGKVASH SLDSGAPLSE QTISQALATA REHLARSLLK
001: MELPPKVKNI LLLDSEGKRV AVKYYSDDWP TNSAQEAFEK SVFTKTQKTN ARTEVEVTAL ENNIVVYKFV QDLHFFVTGG EEENELILAS VLEGLFDAVT
101: LLLRSNVDKR EALDNLDLIF LSFDEIIDGG IVLETDANVI AGKAGINSTD PNAPLSEQTI SQALATAREH LTRSLMK
101: LLLRSNVDKR EALDNLDLIF LSFDEIIDGG IVLETDANVI AGKAGINSTD PNAPLSEQTI SQALATAREH LTRSLMK
Arabidopsis Description
Coatomer subunit zeta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q940S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.