Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g071170.2.1 | Tomato | plastid | 98.31 | 98.31 |
| KRH11718 | Soybean | endoplasmic reticulum | 81.92 | 81.01 |
| KRH36712 | Soybean | endoplasmic reticulum | 81.92 | 81.01 |
| KXG35813 | Sorghum | cytosol | 78.53 | 76.37 |
| AT1G60970.1 | Thale cress | cytosol | 76.27 | 76.27 |
| VIT_10s0003g02760.t01 | Wine grape | cytosol | 85.88 | 76.0 |
| Os02t0317400-01 | Rice | cytosol | 77.97 | 75.82 |
| Bra027107.1-P | Field mustard | cytosol | 75.71 | 75.71 |
| PGSC0003DMT400006628 | Potato | cytosol | 77.97 | 75.0 |
| PGSC0003DMT400083870 | Potato | cytosol | 76.84 | 74.32 |
| TraesCS5D01G173000.1 | Wheat | cytosol | 73.45 | 71.43 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 73.45 | 71.43 |
| Zm00001d020783_P005 | Maize | mitochondrion | 77.97 | 67.98 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 74.01 | 58.22 |
| CDY12879 | Canola | mitochondrion | 75.71 | 56.3 |
| CDY44831 | Canola | cytosol, mitochondrion | 73.45 | 55.56 |
| Os09t0251450-00 | Rice | extracellular | 21.47 | 46.34 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400007924 | EnsemblPlantsGene:PGSC0003DMG400003068 | EntrezGene:102591694 | Gene3D:3.30.450.60 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf |
| PANTHER:PTHR11043 | PANTHER:PTHR11043:SF8 | PFAM:PF01217 | PGSC:PGSC0003DMG400003068 | RefSeq:XP_006355599.1 | SEG:seg |
| SUPFAM:SSF64356 | UniParc:UPI000295A8DB | UniProt:M0ZTR8 | MapMan:22.3.1.4.4 | : | : |
Description
Nonclathrin coat protein zeta2-COP [Source:PGSC_GENE;Acc:PGSC0003DMG400003068]
Coordinates
chr2:+:30370276..30375332
Molecular Weight (calculated)
19357.0 Da
IEP (calculated)
4.327
GRAVY (calculated)
0.033
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: METCPAIKNI LLLDSEGKRV AVNYYSDDWP TNAAKEAFEK AVFAKTQKTN ARAEAEITMF DNYIVVYKFA QDLHFFVTGS DNENEIILAS VLQGFFDAVG
101: ILLRGNVEKK ESLENLDLIL LCLDEIVDGG IVLETDANVI AGKVASNSVD SGAPLSEQTI SQALATAREH LARSLLK
101: ILLRGNVEKK ESLENLDLIL LCLDEIVDGG IVLETDANVI AGKVASNSVD SGAPLSEQTI SQALATAREH LARSLLK
001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT
Arabidopsis Description
SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.