Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G60970.1 | Thale cress | cytosol | 91.53 | 91.53 |
| Solyc02g071170.2.1 | Tomato | plastid | 76.27 | 76.27 |
| PGSC0003DMT400007924 | Potato | cytosol | 75.71 | 75.71 |
| CDY44831 | Canola | cytosol, mitochondrion | 97.74 | 73.93 |
| KRH11718 | Soybean | endoplasmic reticulum | 74.58 | 73.74 |
| KRH36712 | Soybean | endoplasmic reticulum | 74.58 | 73.74 |
| CDY12879 | Canola | mitochondrion | 98.87 | 73.53 |
| VIT_10s0003g02760.t01 | Wine grape | cytosol | 80.23 | 71.0 |
| Bra001298.1-P | Field mustard | cytosol | 71.75 | 69.02 |
| Bra029790.1-P | Field mustard | cytosol | 57.06 | 68.71 |
| Os02t0317400-01 | Rice | cytosol | 68.36 | 66.48 |
| KXG35813 | Sorghum | cytosol | 68.36 | 66.48 |
| TraesCS5D01G173000.1 | Wheat | cytosol | 67.8 | 65.93 |
| TraesCS5B01G165500.2 | Wheat | cytosol | 67.23 | 65.38 |
| Bra037861.1-P | Field mustard | extracellular | 50.28 | 64.49 |
| Zm00001d020783_P005 | Maize | mitochondrion | 68.93 | 60.1 |
| TraesCS5A01G168700.2 | Wheat | cytosol | 67.23 | 52.89 |
| Os09t0251450-00 | Rice | extracellular | 19.21 | 41.46 |
Protein Annotations
| EnsemblPlants:Bra027107.1 | EnsemblPlants:Bra027107.1-P | EnsemblPlantsGene:Bra027107 | Gene3D:3.30.450.60 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | InterPro:AP_mu_sigma_su | InterPro:Longin-like_dom_sf |
| PANTHER:PTHR11043 | PANTHER:PTHR11043:SF8 | PFAM:PF01217 | SUPFAM:SSF64356 | UniParc:UPI000254265B | UniProt:M4EE96 |
| MapMan:22.3.1.4.4 | : | : | : | : | : |
Description
AT1G60970 (E=3e-088) | clathrin adaptor complex small chain family protein
Coordinates
chrA09:+:8526188..8527742
Molecular Weight (calculated)
19610.4 Da
IEP (calculated)
4.433
GRAVY (calculated)
-0.094
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MELPPKVKNI LLLDSEGKRI AAKYYSGDWP TNTAKEAFEK AVFSKTQKTN ARTEVEVTAL ENNIIVYKFV QDLHFFVTGG EEENELVLAS VLQGLFDAVN
101: LLLRGNVDKR EALDNLDLIF LCFDEIIDGG IVLETDANVI AEKAGINSID PNAPLSEQTI SQALATAREH LTRSLMK
101: LLLRGNVDKR EALDNLDLIF LCFDEIIDGG IVLETDANVI AEKAGINSID PNAPLSEQTI SQALATAREH LTRSLMK
001: MELPPKVKNI LLLDSEGKRV AVKYYSDDWP TNSAQEAFEK SVFTKTQKTN ARTEVEVTAL ENNIVVYKFV QDLHFFVTGG EEENELILAS VLEGLFDAVT
101: LLLRSNVDKR EALDNLDLIF LSFDEIIDGG IVLETDANVI AGKAGINSTD PNAPLSEQTI SQALATAREH LTRSLMK
101: LLLRSNVDKR EALDNLDLIF LSFDEIIDGG IVLETDANVI AGKAGINSTD PNAPLSEQTI SQALATAREH LTRSLMK
Arabidopsis Description
Coatomer subunit zeta-1 [Source:UniProtKB/Swiss-Prot;Acc:Q940S5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.