Factsheet for Bra029790.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037861.1-P	Field mustard	extracellular	77.55	82.61
CDY44731	Canola	cytosol	96.6	78.45
Bra001298.1-P	Field mustard	cytosol	94.56	75.54
KRH23291	Soybean	endoplasmic reticulum	71.43	58.01
KRH44115	Soybean	cytosol	70.75	57.78
PGSC0003DMT400006628	Potato	cytosol	72.11	57.61
VIT_09s0002g01710.t01	Wine grape	cytosol	71.43	57.38
Solyc03g121800.2.1	Tomato	plastid	71.43	57.07
Bra027107.1-P	Field mustard	cytosol	68.71	57.06
Solyc12g044910.1.1	Tomato	cytosol	70.07	56.28
PGSC0003DMT400083870	Potato	cytosol	70.07	56.28
Os02t0317400-01	Rice	cytosol	68.03	54.95
KXG35813	Sorghum	cytosol	67.35	54.4
TraesCS5D01G173000.1	Wheat	cytosol	67.35	54.4
TraesCS5B01G165500.2	Wheat	cytosol	66.67	53.85
AT3G09800.6	Thale cress	cytosol	93.2	52.9
Zm00001d020783_P005	Maize	mitochondrion	68.03	49.26
KRH47095	Soybean	endoplasmic reticulum	61.22	47.87
TraesCS5A01G168700.2	Wheat	cytosol	66.67	43.56
Os09t0251450-00	Rice	extracellular	22.45	40.24

Protein Annotations

EnsemblPlants:Bra029790.1	EnsemblPlants:Bra029790.1-P	EnsemblPlantsGene:Bra029790	Gene3D:3.30.450.60	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	InterPro:AP_mu_sigma_su	InterPro:Longin-like_dom_sf
PANTHER:PTHR11043	PANTHER:PTHR11043:SF8	PFAM:PF01217	SUPFAM:SSF64356	UniParc:UPI0002547A57	UniProt:M4ELX0
MapMan:22.3.1.4.4	:	:	:	:	:

Description

AT3G09800 (E=1e-071) | protein binding

Coordinates

chrA05:+:22259337..22260418

Molecular Weight (calculated)

16161.2 Da

IEP (calculated)

4.196

GRAVY (calculated)

0.095

Length

147 amino acids

Sequence
(BLAST)

001: MSGTHLSFEK YVFSKTSKTN ARTEAEITLL DSNIIVYKFA QDLHFFVTGG DDENELVLSS VLQGFFDAVA LLLRNNVEKM EALENLDLIF LCLDEMVDQG
101: VVLETDPNVI AGKVAMQSTE ASGSLSEQTL TQALATAREH LARSLLT

Best Arabidopsis Sequence Match ( AT3G09800.1 )
(BLAST)

001: MSPDSCPLVK KILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA
101: VALLLRSNVE KMEALENLDL IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT

Arabidopsis Description

SNARE-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRF9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.