Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
23257241
plastid: 23257241 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G178900.1 | Wheat | cytosol | 25.24 | 63.93 |
| TraesCS7B01G083300.1 | Wheat | cytosol | 26.21 | 60.9 |
| TraesCS7A01G236700.1 | Wheat | plastid | 30.1 | 43.87 |
| TraesCS7B01G082900.1 | Wheat | plastid | 27.83 | 43.0 |
| TraesCS7D01G179300.1 | Wheat | plastid | 29.45 | 42.92 |
| HORVU7Hr1G036500.7 | Barley | plastid | 28.16 | 42.65 |
| TraesCS7D01G232600.1 | Wheat | plastid | 28.8 | 42.58 |
| TraesCS7B01G083500.1 | Wheat | mitochondrion | 32.04 | 42.49 |
| TraesCS7A01G177700.1 | Wheat | cytosol, plastid | 29.45 | 42.13 |
| TraesCS7A01G177500.1 | Wheat | cytosol, plastid | 29.45 | 42.13 |
| TraesCS7D01G179600.1 | Wheat | mitochondrion | 31.72 | 41.88 |
| TraesCS7D01G179100.1 | Wheat | plastid | 29.13 | 41.86 |
| TraesCS7A01G232500.1 | Wheat | plastid | 27.83 | 41.75 |
| TraesCS7D01G179400.1 | Wheat | plastid | 28.16 | 41.43 |
| TraesCS7D01G179500.1 | Wheat | plastid | 28.8 | 41.4 |
| TraesCS7D01G179000.1 | Wheat | plastid | 28.48 | 41.31 |
| TraesCS7B01G083100.1 | Wheat | plastid | 28.48 | 41.31 |
| Os02t0758000-01 | Rice | plastid | 29.13 | 40.91 |
| TraesCS7B01G083400.1 | Wheat | plastid | 28.16 | 40.85 |
| TraesCS2B01G531300.1 | Wheat | plastid | 22.98 | 40.34 |
| TraesCS7B01G083200.2 | Wheat | plastid | 28.8 | 40.27 |
| KRH39841 | Soybean | mitochondrion | 19.09 | 40.14 |
| TraesCS7D01G179200.1 | Wheat | cytosol, plastid | 26.86 | 39.71 |
| EER89430 | Sorghum | plastid | 29.13 | 39.65 |
| OQU76071 | Sorghum | plastid | 25.89 | 39.6 |
| HORVU7Hr1G036570.2 | Barley | cytosol | 28.16 | 39.37 |
| TraesCS7A01G177600.1 | Wheat | plastid | 27.18 | 39.07 |
| GSMUA_Achr10P... | Banana | mitochondrion | 26.86 | 38.43 |
| KRH23958 | Soybean | mitochondrion | 25.57 | 37.26 |
| HORVU7Hr1G036470.3 | Barley | cytosol, nucleus | 28.8 | 36.78 |
| Zm00001d044874_P001 | Maize | cytosol, plastid | 24.27 | 36.06 |
| Solyc08g078700.2.1 | Tomato | plastid | 23.62 | 34.76 |
| CDX89437 | Canola | mitochondrion | 23.95 | 34.74 |
| Bra013872.1-P | Field mustard | mitochondrion | 23.95 | 34.74 |
| OQU75612 | Sorghum | plastid | 24.92 | 34.53 |
| OQU75930 | Sorghum | plastid | 24.92 | 34.53 |
| HORVU7Hr1G036540.3 | Barley | mitochondrion, nucleus, plastid | 28.8 | 34.5 |
| CDX99920 | Canola | mitochondrion | 17.8 | 34.38 |
| CDY03368 | Canola | mitochondrion | 23.62 | 34.27 |
| PGSC0003DMT400012249 | Potato | mitochondrion | 23.3 | 34.12 |
| VIT_02s0154g00480.t01 | Wine grape | mitochondrion, plastid | 22.01 | 33.83 |
| CDY38862 | Canola | mitochondrion | 21.36 | 33.67 |
| Bra029174.1-P | Field mustard | mitochondrion | 21.36 | 33.5 |
| VIT_16s0022g00510.t01 | Wine grape | mitochondrion | 22.33 | 33.17 |
| EER89431 | Sorghum | plastid | 22.98 | 32.72 |
| AT5G51440.1 | Thale cress | mitochondrion | 22.01 | 32.38 |
| TraesCS7B01G130900.1 | Wheat | plastid | 16.83 | 32.1 |
| AT4G25200.1 | Thale cress | mitochondrion | 21.68 | 31.9 |
| VIT_02s0154g00490.t01 | Wine grape | mitochondrion | 20.71 | 31.84 |
| CDY32630 | Canola | mitochondrion | 17.48 | 31.76 |
| TraesCS7A01G177800.1 | Wheat | nucleus | 23.62 | 31.74 |
| CDY00476 | Canola | mitochondrion | 16.5 | 31.68 |
| Bra028253.1-P | Field mustard | mitochondrion | 16.5 | 31.68 |
| KXG19616 | Sorghum | plastid | 26.21 | 30.11 |
| TraesCS5B01G123900.1 | Wheat | plastid | 18.45 | 23.85 |
| Solyc08g078710.1.1 | Tomato | mitochondrion | 14.24 | 22.45 |
| PGSC0003DMT400012247 | Potato | mitochondrion | 13.27 | 21.03 |
| PGSC0003DMT400012246 | Potato | plastid | 10.36 | 18.82 |
| Solyc08g078720.2.1 | Tomato | mitochondrion | 9.71 | 17.86 |
Protein Annotations
| MapMan:19.1.8.8 | Gene3D:2.60.40.790 | InterPro:A-crystallin/Hsp20_dom | UniProt:A0A0P0WUH9 | ProteinID:BAS96815.1 | ncoils:Coil |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009408 | GO:GO:0009628 | InterPro:HSP20 | InterPro:HSP20-like_chaperone | InterPro:IPR002068 |
| InterPro:IPR008978 | EnsemblPlantsGene:Os06g0219500 | EnsemblPlants:Os06t0219500-00 | PFAM:PF00011 | PFscan:PS01031 | PANTHER:PTHR11527 |
| PANTHER:PTHR11527:SF176 | SUPFAM:SSF49764 | UniParc:UPI000393AA34 | SEG:seg | : | : |
Description
Similar to 26.2 kDa heat shock protein, mitochondrial. (Os06t0219500-00)
Coordinates
chr6:-:6152338..6153502
Molecular Weight (calculated)
33535.3 Da
IEP (calculated)
10.794
GRAVY (calculated)
-0.919
Length
309 amino acids
Sequence
(BLAST)
(BLAST)
001: SYTNGTNHKA RDLSPKPAVT HGLLRHSGTF SIPSSKKAAA YKRLHTLTPP LLHSPHRFSF HRKNHRALET RERRERERER ERERERERER ESHPWLPPSP
101: SRAARSPPSS GSSSPPTRRP PPPGGPSPPL PPPPGSPARR SAATTSSTSP APTAATSTTP PTTAAASPSP SSSPPPVKDS FLAFDAAVAT AAAPGTNGLA
201: TAAARRGGWW VAKEDDDAVH LKVSMPGLGK EHVKVWAEQN SLVIKGEGEK DPEDDADAAP PRYTRRIELP ADAFKMDKIK AEMKNGVLRV AVPKLKEEER
301: KDVFQVNVE
101: SRAARSPPSS GSSSPPTRRP PPPGGPSPPL PPPPGSPARR SAATTSSTSP APTAATSTTP PTTAAASPSP SSSPPPVKDS FLAFDAAVAT AAAPGTNGLA
201: TAAARRGGWW VAKEDDDAVH LKVSMPGLGK EHVKVWAEQN SLVIKGEGEK DPEDDADAAP PRYTRRIELP ADAFKMDKIK AEMKNGVLRV AVPKLKEEER
301: KDVFQVNVE
001: MASSSALALR RLLSSSTVAV PRALRAVRPV AASSRLFNTN AARNYEDGVD RNHHSNRHVS RHGGDFFSHI LDPFTPTRSL SQMLNFMDQV SEIPLVSATR
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
101: GMGASGVRRG WNVKEKDDAL HLRIDMPGLS REDVKLALEQ NTLVIRGEGE TEEGEDVSGD GRRFTSRIEL PEKVYKTDEI KAEMKNGVLK VVIPKIKEDE
201: RNNIRHINVD
Arabidopsis Description
HSP23.523.5 kDa heat shock protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FGM9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.