Factsheet for Os10t0499500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 16489123

gfp PMID: 16489123 doi

Z Wang, Y Zou, X Li, Q Zhang, L Chen, H Wu, D Su, Y Chen, J Guo, D Luo, Y Long, Y Zhong, YG Liu

Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Province, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0497432-01	Rice	mitochondrion	37.35	71.05
Os08t0248400-01	Rice	mitochondrion	58.3	67.05
Os10t0495100-01	Rice	cytosol, mitochondrion	59.49	65.29
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	27.27	54.55
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	34.98	54.46
HORVU1Hr1G018190.2	Barley	cytosol	30.63	54.39
Os10t0497366-00	Rice	mitochondrion	42.29	53.37
Os08t0107700-01	Rice	cytosol, mitochondrion	38.93	52.67
Zm00001d018982_P001	Maize	mitochondrion	36.36	52.57
TraesCSU01G089800.1	Wheat	mitochondrion	36.17	52.14
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	38.93	51.98
TraesCS6A01G015000.1	Wheat	mitochondrion	41.9	51.08
TraesCS6D01G076500.1	Wheat	plastid	43.87	49.01
TraesCSU01G090200.1	Wheat	cytosol	41.9	47.96
Os10t0495200-01	Rice	mitochondrion	74.11	47.95
OQU82832	Sorghum	cytosol	26.68	47.2
Os10t0497300-01	Rice	mitochondrion	73.72	46.98
TraesCSU01G089700.1	Wheat	mitochondrion	43.28	45.44
Os10t0501700-00	Rice	cytosol	40.51	45.15
Os08t0107800-01	Rice	mitochondrion	54.35	44.07
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	50.0	35.43
HORVU6Hr1G014310.1	Barley	mitochondrion	48.02	35.37
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	49.6	35.1
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	49.41	34.97
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	48.81	34.55
Os08t0110200-01	Rice	mitochondrion	54.35	34.46
TraesCS6D01G047700.1	Wheat	mitochondrion	47.04	34.44
TraesCS6B01G021600.1	Wheat	mitochondrion	47.04	33.24
HORVU6Hr1G002890.6	Barley	cytosol, plastid	50.0	31.82
Zm00001d009733_P001	Maize	cytosol	49.21	31.32
Os04t0349600-01	Rice	plastid	23.72	31.01
Solyc06g007280.2.1	Tomato	cytosol	15.41	30.59
KXG27690	Sorghum	cytosol, plastid	43.87	30.37
EES07882	Sorghum	cytosol	46.25	30.12
OQU82827	Sorghum	cytosol	47.04	29.86
OQU82823	Sorghum	cytosol	46.84	29.74
OQU82856	Sorghum	cytosol	44.07	29.65
EES09203	Sorghum	cytosol	45.85	29.07
OQU80148	Sorghum	mitochondrion	41.7	29.02
TraesCS6D01G017800.1	Wheat	cytosol	30.63	28.86
TraesCS6D01G017700.1	Wheat	plastid	28.26	26.78
OQU82836	Sorghum	cytosol	32.21	26.63
KRH39054	Soybean	cytosol	25.69	26.16
OQU82831	Sorghum	cytosol	31.62	26.1
Zm00001d009735_P001	Maize	cytosol	49.6	25.8
KRH39004	Soybean	cytosol	25.3	25.75
KRH39057	Soybean	cytosol	25.3	25.75
KRH39074	Soybean	cytosol	25.1	25.55
VIT_12s0028g02320.t01	Wine grape	mitochondrion	23.91	25.37
Bra036649.1-P	Field mustard	cytosol	19.37	25.06
AT1G63400.1	Thale cress	cytosol, plastid	28.46	24.96
KXG19780	Sorghum	cytosol	29.05	24.87
AT1G62914.1	Thale cress	mitochondrion	25.89	24.81
KRH39072	Soybean	cytosol	24.31	24.8
KRH09084	Soybean	plastid	24.9	24.66
KRH39112	Soybean	cytosol	24.11	24.55
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	37.15	24.54
KRH40513	Soybean	plastid	17.0	24.5
AT1G63330.2	Thale cress	cytosol	26.88	24.33
KRH39066	Soybean	cytosol	26.48	24.14
TraesCS6A01G083000.1	Wheat	cytosol	21.74	24.12
AT1G62930.1	Thale cress	plastid	29.84	24.01
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	24.9	24.0
AT1G63080.3	Thale cress	mitochondrion	28.85	23.78
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	23.72	23.76
KRH08636	Soybean	cytosol	24.51	23.75
AT1G62910.1	Thale cress	mitochondrion	29.64	23.73
AT1G62670.1	Thale cress	mitochondrion	29.25	23.49
AT1G63130.1	Thale cress	mitochondrion	29.25	23.49
KRH17148	Soybean	mitochondrion	25.3	23.49
KRH09154	Soybean	mitochondrion	25.49	23.2
KRH31646	Soybean	cytosol	23.72	23.17
KRH08277	Soybean	plastid	25.89	23.1
Bra027029.1-P	Field mustard	mitochondrion	11.07	23.05
KRH39050	Soybean	mitochondrion	24.11	22.93
Solyc06g005220.2.1	Tomato	cytosol	18.38	22.91
KRH08639	Soybean	mitochondrion, plastid	25.49	22.83
KRH08628	Soybean	plastid	24.9	22.83
KRH08607	Soybean	cytosol	25.3	22.82
KRH48615	Soybean	mitochondrion	24.51	22.75
Bra036651.1-P	Field mustard	mitochondrion	23.91	22.62
KRH08671	Soybean	cytosol, mitochondrion	24.7	22.6
AT1G63150.1	Thale cress	mitochondrion	28.06	22.58
OQU82834	Sorghum	cytosol	42.89	22.53
KRH41817	Soybean	mitochondrion	24.7	22.52
AT1G63070.1	Thale cress	mitochondrion	26.09	22.37
AT1G62590.1	Thale cress	mitochondrion	27.87	22.24
Bra027636.1-P	Field mustard	cytosol	14.23	22.22
KRH09121	Soybean	mitochondrion	23.32	22.1
VIT_14s0081g00120.t01	Wine grape	plastid	25.3	21.96
Bra026971.1-P	Field mustard	mitochondrion	27.27	21.94
VIT_14s0030g02280.t01	Wine grape	plastid	24.31	21.93
KRH40400	Soybean	plastid	24.7	21.66
AT1G62720.1	Thale cress	mitochondrion	20.75	21.65
Bra021192.1-P	Field mustard	plastid	21.54	21.63
VIT_14s0081g00110.t01	Wine grape	cytosol	20.95	21.59
AT1G12620.1	Thale cress	cytosol, mitochondrion	26.28	21.42
VIT_14s0081g00270.t01	Wine grape	plastid	24.51	21.38
AT3G22470.1	Thale cress	cytosol, mitochondrion	26.09	21.32
AT5G16640.1	Thale cress	mitochondrion	21.15	21.23
Bra027026.1-P	Field mustard	mitochondrion	21.94	21.22
Bra026884.1-P	Field mustard	cytosol	19.17	21.13
TraesCS6B01G114300.1	Wheat	cytosol	16.21	21.08
KRH08625	Soybean	plastid	23.91	21.01
KRH25652	Soybean	cytosol, golgi	22.33	20.93
AT1G12300.1	Thale cress	mitochondrion	26.28	20.88
KRH09095	Soybean	plastid	24.11	20.85
AT1G64580.1	Thale cress	mitochondrion	21.54	20.84
Bra026958.1-P	Field mustard	mitochondrion	26.09	20.72
Solyc06g007740.1.1	Tomato	cytosol	24.11	20.68
Bra026954.1-P	Field mustard	mitochondrion	26.48	20.62
KRH09082	Soybean	cytosol	16.6	20.59
AT3G16710.1	Thale cress	mitochondrion	20.55	20.51
Bra026882.1-P	Field mustard	cytosol	21.54	20.41
KRH09097	Soybean	plastid	23.52	20.41
PGSC0003DMT400025074	Potato	cytosol	22.13	20.29
VIT_14s0081g00280.t01	Wine grape	mitochondrion	25.49	20.19
Bra028267.1-P	Field mustard	mitochondrion	24.9	20.13
Bra027658.1-P	Field mustard	cytosol, mitochondrion	21.54	20.07
PGSC0003DMT400015293	Potato	mitochondrion	24.11	20.0
PGSC0003DMT400015298	Potato	mitochondrion	24.11	20.0
PGSC0003DMT400025087	Potato	endoplasmic reticulum	19.57	20.0
Bra025516.1-P	Field mustard	cytosol, mitochondrion	18.77	19.92
AT1G62680.2	Thale cress	plastid	21.54	19.89
PGSC0003DMT400008757	Potato	cytosol	19.57	19.88
AT1G12775.1	Thale cress	cytosol, mitochondrion	25.3	19.88
PGSC0003DMT400053185	Potato	mitochondrion	23.12	19.83
AT1G06580.1	Thale cress	mitochondrion	19.57	19.8
Solyc04g080120.1.1	Tomato	extracellular	23.91	19.77
Bra016762.1-P	Field mustard	mitochondrion	23.72	19.77
Solyc06g007300.1.1	Tomato	extracellular	23.12	19.76
PGSC0003DMT400025067	Potato	cytosol	18.58	19.75
Bra026957.1-P	Field mustard	mitochondrion	23.32	19.57
AT1G64583.1	Thale cress	mitochondrion	19.76	19.53
Os04t0351333-00	Rice	cytosol	33.6	19.34
AT1G12700.2	Thale cress	cytosol	23.52	19.26
AT5G41170.1	Thale cress	mitochondrion	19.96	19.17
PGSC0003DMT400056663	Potato	plastid	22.13	19.05
Bra031731.1-P	Field mustard	mitochondrion	18.97	18.9
PGSC0003DMT400056665	Potato	mitochondrion	21.74	18.68
Bra006187.1-P	Field mustard	plastid	10.67	18.56
KRH08599	Soybean	cytosol, plastid	24.51	18.54
PGSC0003DMT400052977	Potato	cytosol	14.23	18.51
TraesCS6A01G014600.1	Wheat	cytosol	14.43	18.48
Bra026836.1-P	Field mustard	cytosol, mitochondrion	17.79	18.33
PGSC0003DMT400052971	Potato	mitochondrion	21.34	18.21
AT4G26800.2	Thale cress	mitochondrion, plastid	18.38	18.09
PGSC0003DMT400053182	Potato	cytosol	21.34	18.03
PGSC0003DMT400053556	Potato	mitochondrion	16.21	17.86
PGSC0003DMT400008760	Potato	mitochondrion	20.55	17.75
KRH09085	Soybean	mitochondrion	24.31	17.47
Bra027726.1-P	Field mustard	mitochondrion	16.21	17.41
CDX68679	Canola	cytosol	3.95	17.39
PGSC0003DMT400008759	Potato	cytosol	10.87	17.24
Bra026401.1-P	Field mustard	plastid	17.79	16.82
AT1G64100.2	Thale cress	cytosol	26.68	16.75
OQU82833	Sorghum	cytosol	13.64	15.4
Bra027656.1-P	Field mustard	cytosol	28.46	15.3
Solyc06g007810.1.1	Tomato	cytosol	8.1	15.3
VIT_14s0030g02260.t01	Wine grape	cytosol	13.04	14.9
KRH39064	Soybean	cytosol	27.08	14.14
KRH12873	Soybean	cytosol	19.17	13.94
Bra016758.1-P	Field mustard	plastid	25.1	10.96

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:4349026	ProteinID:AAM93691.1	ProteinID:AAP54465.1	EMBL:AK065378
EMBL:AK069398	ProteinID:BAF26889.1	ProteinID:BAJ07249.1	ProteinID:BAJ07251.1	ProteinID:BAT11514.1	ProteinID:EAZ16577.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os10g0499500	EnsemblPlants:Os10t0499500-01	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF302	InterPro:Pentatricopeptide_repeat
UniProt:Q8LNH0	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000009F726	RefSeq:XP_015614861.1
SEG:seg	:	:	:	:	:

Description

RESTORATION OF FERTILITY 1BSimilar to Fertility restorer. (Os10t0499500-01)

Coordinates

chr10:+:19056887..19059383

Molecular Weight (calculated)

55361.3 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.017

Length

506 amino acids

Sequence
(BLAST)

001: MARRVAARAR ARAGGVPRSE GTIQDRARVG SGGAEDALDV FDELLRRGIG APIRSLNGAL ADVARDNPAA AVSRFNRMAR AGASMVTPTV HTYGILIGCC
101: CSAGRLDLGF AALGHVVKKG FRVEPIIFNP LLKGLCADKR TDDAMDIVLR GMTELSCVPN VFSHTIILKG LCHENRSQEA LELLHMMADD GGGCLPNVVS
201: YSTVIDGLLK GGDPDKAYAT YREMLDRRIL PNVVIYSSII AALCKGQAMD KAMEVHDRMV KNGVTPNCFT YTSLVHGFCS SGQLTEAIKF LEKMCSNGVE
301: PNVVTYSSFM DYLCKNGRCT EARKIFDSMV KRGLKPDITT YSSLLHGYAI EGALVEMHGL FDLMVQSDMQ PDHYVFNTLI YASAKQGKVD EAMLVFSKMR
401: QQGLKPNCVT YSTLINGYCK ITRMENALAL FQEMVSNGVS PNFITYNIML QGLFRTGRTA TAKEFYVQII KSGKKDLIEQ GLLEELDDLF LSMEDNDCST
501: VSTPAC

Best Arabidopsis Sequence Match ( AT1G62910.1 )
(BLAST)

001: MQRSISLTAK RLFVHWNLQG IGNPPTVPSF FNLCGSGCWE RSFASASGDY REILRNRLSD IIKVDDAVDL FGDMVKSRPF PSIVEFNKLL SAVAKMNKFE
101: LVISLGEQMQ TLGISHDLYT YSIFINCFCR RSQLSLALAV LAKMMKLGYE PDIVTLSSLL NGYCHSKRIS DAVALVDQMV EMGYKPDTFT FTTLIHGLFL
201: HNKASEAVAL VDQMVQRGCQ PDLVTYGTVV NGLCKRGDID LALSLLKKME KGKIEADVVI YNTIIDGLCK YKHMDDALNL FTEMDNKGIR PDVFTYSSLI
301: SCLCNYGRWS DASRLLSDMI ERKINPNVVT FSALIDAFVK EGKLVEAEKL YDEMIKRSID PDIFTYSSLI NGFCMHDRLD EAKHMFELMI SKDCFPNVVT
401: YSTLIKGFCK AKRVEEGMEL FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT YNILLDGLCK NGKLAKAMVV FEYLQRSTME
501: PDIYTYNIMI EGMCKAGKVE DGWELFCNLS LKGVSPNVIA YNTMISGFCR KGSKEEADSL LKKMKEDGPL PNSGTYNTLI RARLRDGDRE ASAELIKEMR
601: SCGFAGDAST IGLVTNMLHD GRLDKSFLDM LS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g62910 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ16]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.