Factsheet for Bra027636.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65983	Canola	mitochondrion	77.16	59.24
Bra027029.1-P	Field mustard	mitochondrion	37.65	50.21
Bra036649.1-P	Field mustard	cytosol	56.48	46.8
Bra006187.1-P	Field mustard	plastid	41.98	46.74
Bra026884.1-P	Field mustard	cytosol	51.23	36.17
Bra021192.1-P	Field mustard	plastid	54.32	34.92
Bra027726.1-P	Field mustard	mitochondrion	50.31	34.61
Bra025516.1-P	Field mustard	cytosol, mitochondrion	50.93	34.59
Bra027026.1-P	Field mustard	mitochondrion	54.01	33.46
Bra036651.1-P	Field mustard	mitochondrion	54.63	33.08
Solyc06g007280.2.1	Tomato	cytosol	24.69	31.37
PGSC0003DMT400052977	Potato	cytosol	37.65	31.36
PGSC0003DMT400008759	Potato	cytosol	30.25	30.72
Solyc06g005220.2.1	Tomato	cytosol	37.96	30.3
Bra026882.1-P	Field mustard	cytosol	49.38	29.96
Bra027658.1-P	Field mustard	cytosol, mitochondrion	48.15	28.73
Bra026836.1-P	Field mustard	cytosol, mitochondrion	42.9	28.31
VIT_14s0081g00110.t01	Wine grape	cytosol	42.9	28.31
VIT_12s0028g02320.t01	Wine grape	mitochondrion	41.36	28.09
Bra016762.1-P	Field mustard	mitochondrion	52.47	28.01
Bra026971.1-P	Field mustard	mitochondrion	52.47	27.03
Solyc06g007810.1.1	Tomato	cytosol	22.22	26.87
Bra028267.1-P	Field mustard	mitochondrion	50.62	26.2
Bra026957.1-P	Field mustard	mitochondrion	48.15	25.87
VIT_14s0030g02260.t01	Wine grape	cytosol	35.19	25.73
Bra026958.1-P	Field mustard	mitochondrion	50.31	25.59
Bra026401.1-P	Field mustard	plastid	41.98	25.42
Bra031731.1-P	Field mustard	mitochondrion	39.81	25.39
KRH09256	Soybean	mitochondrion	42.9	24.87
KRH70370	Soybean	cytosol	41.36	24.63
VIT_14s0081g00270.t01	Wine grape	plastid	43.83	24.48
KRH49698	Soybean	cytosol	42.28	24.04
Bra026954.1-P	Field mustard	mitochondrion	47.84	23.85
PGSC0003DMT400025074	Potato	cytosol	40.12	23.55
PGSC0003DMT400025067	Potato	cytosol	34.57	23.53
KRH38755	Soybean	mitochondrion	42.9	23.4
VIT_14s0081g00120.t01	Wine grape	plastid	41.98	23.33
HORVU1Hr1G011250.1	Barley	cytosol	20.99	23.05
PGSC0003DMT400025087	Potato	endoplasmic reticulum	35.19	23.03
TraesCS2B01G126900.1	Wheat	cytosol	26.85	22.77
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.68	22.56
Os10t0501700-00	Rice	cytosol	30.86	22.03
VIT_14s0030g02280.t01	Wine grape	plastid	37.96	21.93
PGSC0003DMT400008757	Potato	cytosol	33.64	21.89
Solyc06g007300.1.1	Tomato	extracellular	39.2	21.45
KRH75045	Soybean	mitochondrion	39.51	21.44
VIT_14s0081g00280.t01	Wine grape	mitochondrion	42.28	21.44
KRH75048	Soybean	mitochondrion	39.81	21.22
PGSC0003DMT400008760	Potato	mitochondrion	38.27	21.16
KRH75063	Soybean	mitochondrion, plastid	39.2	21.03
PGSC0003DMT400053556	Potato	mitochondrion	29.63	20.91
PGSC0003DMT400052971	Potato	mitochondrion	38.27	20.91
Solyc06g007740.1.1	Tomato	cytosol	37.96	20.85
KRH42744	Soybean	mitochondrion	39.2	20.79
KRH58843	Soybean	nucleus	38.89	20.62
PGSC0003DMT400056665	Potato	mitochondrion	37.35	20.54
Os10t0497366-00	Rice	mitochondrion	25.31	20.45
TraesCS6B01G127200.1	Wheat	cytosol	21.3	20.06
PGSC0003DMT400053185	Potato	mitochondrion	36.42	20.0
PGSC0003DMT400056663	Potato	plastid	35.8	19.73
HORVU1Hr1G018190.2	Barley	cytosol	17.28	19.65
TraesCS1D01G058400.1	Wheat	cytosol	31.17	19.61
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	22.53	19.31
PGSC0003DMT400015293	Potato	mitochondrion	35.8	19.02
PGSC0003DMT400015298	Potato	mitochondrion	35.8	19.02
Solyc04g080120.1.1	Tomato	extracellular	35.49	18.79
TraesCS1D01G058000.1	Wheat	cytosol	23.46	18.72
KXG34536	Sorghum	mitochondrion	32.72	18.53
PGSC0003DMT400053182	Potato	cytosol	33.64	18.2
TraesCS1B01G072700.1	Wheat	cytosol	28.4	18.04
TraesCS6A01G083000.1	Wheat	cytosol	25.0	17.76
TraesCS1A01G067700.1	Wheat	extracellular	18.21	17.51
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	27.47	17.42
HORVU6Hr1G017870.2	Barley	mitochondrion	16.05	17.33
KXG35774	Sorghum	cytosol, mitochondrion	24.69	16.91
TraesCS6D01G017700.1	Wheat	plastid	27.78	16.85
TraesCS6B01G114300.1	Wheat	cytosol	20.06	16.71
Zm00001d018982_P001	Maize	mitochondrion	17.9	16.57
TraesCS6D01G083300.1	Wheat	mitochondrion	22.53	16.37
EER95949	Sorghum	mitochondrion	33.33	16.29
TraesCS1B01G039700.1	Wheat	cytosol	30.56	16.28
Os10t0495100-01	Rice	cytosol, mitochondrion	23.15	16.27
TraesCS1B01G038400.1	Wheat	cytosol	30.25	16.12
TraesCS6D01G017800.1	Wheat	cytosol	26.54	16.01
TraesCS1B01G075300.1	Wheat	cytosol	29.32	15.91
Os08t0248400-01	Rice	mitochondrion	21.6	15.91
HORVU0Hr1G035310.1	Barley	cytosol	28.4	15.81
TraesCS2B01G560300.1	Wheat	cytosol	27.47	15.64
OQU88594	Sorghum	cytosol	25.0	15.52
TraesCS7B01G469500.1	Wheat	cytosol	26.85	15.48
TraesCS2A01G531100.1	Wheat	cytosol	27.16	15.47
Bra027656.1-P	Field mustard	cytosol	44.75	15.41
TraesCS1B01G038200.1	Wheat	mitochondrion	29.94	15.32
TraesCS2B01G559900.1	Wheat	cytosol	25.62	15.31
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	22.84	15.29
TraesCS1B01G085400.1	Wheat	cytosol	30.25	15.29
TraesCS1D01G055300.1	Wheat	cytosol	29.01	15.21
TraesCS6A01G014600.1	Wheat	cytosol	18.52	15.19
OQU82831	Sorghum	cytosol	28.7	15.17
Bra016758.1-P	Field mustard	plastid	53.7	15.01
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	22.22	14.97
TraesCS1A01G031600.1	Wheat	cytosol	30.56	14.95
Os08t0107800-01	Rice	mitochondrion	28.7	14.9
TraesCS6D01G083100.1	Wheat	cytosol	22.53	14.9
TraesCS1D01G056700.1	Wheat	cytosol	27.47	14.66
TraesCS1B01G073100.1	Wheat	cytosol	27.16	14.52
TraesCS6B01G127500.1	Wheat	cytosol	21.91	14.49
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	29.63	14.46
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	22.53	14.46
TraesCS6D01G083400.1	Wheat	mitochondrion	21.91	14.4
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	22.22	14.31
TraesCS1A01G054800.1	Wheat	cytosol	25.62	14.26
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.09	14.24
Os10t0499500-01	Rice	mitochondrion	22.22	14.23
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	19.14	14.12
TraesCS6A01G015000.1	Wheat	mitochondrion	17.9	13.98
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	29.01	13.97
TraesCS1A01G057300.1	Wheat	cytosol	30.86	13.93
EES09203	Sorghum	cytosol	34.26	13.91
TraesCS1A01G031700.1	Wheat	plastid	31.79	13.9
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	29.63	13.77
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	29.63	13.73
OQU82856	Sorghum	cytosol	31.79	13.7
TraesCS2A01G531000.1	Wheat	golgi	28.7	13.7
TraesCSU01G089700.1	Wheat	mitochondrion	20.37	13.69
KXG27690	Sorghum	cytosol, plastid	30.56	13.54
TraesCS1B01G072400.1	Wheat	cytosol	29.01	13.53
TraesCS6D01G290900.1	Wheat	mitochondrion	30.56	13.51
OQU80148	Sorghum	mitochondrion	30.25	13.48
Os10t0497300-01	Rice	mitochondrion	33.02	13.48
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	29.63	13.45
Os10t0495200-01	Rice	mitochondrion	32.41	13.43
TraesCS2D01G532100.1	Wheat	mitochondrion	28.4	13.29
TraesCS1A01G067000.1	Wheat	mitochondrion	29.32	13.27
TraesCS1B01G086000.1	Wheat	plastid	28.09	13.27
TraesCS2D01G532500.1	Wheat	plastid	27.78	13.24
TraesCS2A01G526200.1	Wheat	golgi	27.78	13.22
TraesCS1D01G068700.1	Wheat	cytosol	17.9	13.21
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	26.85	13.2
TraesCS6D01G047700.1	Wheat	mitochondrion	28.09	13.17
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	29.01	13.15
TraesCS6B01G021600.1	Wheat	mitochondrion	28.7	12.99
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	31.48	12.96
TraesCS2D01G532400.1	Wheat	cytosol	24.38	12.93
TraesCS1D01G069100.1	Wheat	mitochondrion	25.62	12.91
TraesCS1B01G073200.1	Wheat	cytosol	12.04	12.87
Zm00001d007548_P001	Maize	plastid	32.1	12.78
Zm00001d007534_P001	Maize	plastid	30.56	12.74
Zm00001d007559_P001	Maize	plastid	32.1	12.73
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	30.56	12.69
HORVU6Hr1G014310.1	Barley	mitochondrion	26.85	12.66
TraesCS7D01G231400.1	Wheat	cytosol, plastid	15.74	12.66
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	27.78	12.59
Zm00001d007531_P001	Maize	plastid	31.48	12.53
TraesCS1B01G039100.1	Wheat	mitochondrion	30.25	12.52
TraesCS1D01G068800.1	Wheat	plastid	31.48	12.5
EES07882	Sorghum	cytosol	29.94	12.48
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	16.67	12.47
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	27.47	12.45
TraesCSU01G090200.1	Wheat	cytosol	16.98	12.44
TraesCS1D01G068500.1	Wheat	mitochondrion	31.17	12.44
TraesCS1A01G054500.1	Wheat	mitochondrion	29.94	12.44
OQU82823	Sorghum	cytosol	30.56	12.42
TraesCS1B01G038500.1	Wheat	mitochondrion	30.25	12.41
KXG28799	Sorghum	plastid	29.01	12.37
TraesCS1D01G076500.1	Wheat	mitochondrion	25.31	12.35
Zm00001d009733_P001	Maize	cytosol	30.25	12.33
TraesCS1B01G072300.1	Wheat	plastid	21.6	12.32
TraesCS1B01G084800.1	Wheat	cytosol	17.59	12.28
TraesCS1D01G076700.1	Wheat	cytosol	12.65	12.28
OQU82832	Sorghum	cytosol	10.8	12.24
TraesCS1A01G073700.1	Wheat	cytosol	14.51	12.21
OQU82827	Sorghum	cytosol	29.94	12.17
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	29.63	12.12
TraesCS1A01G067600.1	Wheat	mitochondrion	30.25	12.05
Zm00001d007555_P001	Maize	plastid	30.25	12.04
HORVU1Hr1G004750.6	Barley	plastid	29.63	12.03
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	28.09	11.88
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	17.59	11.88
TraesCS1B01G085300.1	Wheat	mitochondrion	29.01	11.87
TraesCS6A01G311600.1	Wheat	mitochondrion	30.56	11.84
TraesCS1A01G054700.2	Wheat	mitochondrion	29.63	11.82
TraesCS1B01G085900.1	Wheat	mitochondrion	29.63	11.79
HORVU6Hr1G076780.7	Barley	mitochondrion	29.94	11.77
OQU82836	Sorghum	cytosol	22.22	11.76
TraesCS1D01G068600.1	Wheat	plastid	12.35	11.76
TraesCS1B01G039200.1	Wheat	mitochondrion	28.4	11.73
TraesCS1D01G068400.1	Wheat	mitochondrion	29.63	11.66
TraesCS1A01G067400.1	Wheat	mitochondrion	29.63	11.64
TraesCS1D01G033000.1	Wheat	cytosol	14.51	11.63
TraesCS1B01G092600.1	Wheat	plastid	18.52	11.61
Os08t0107700-01	Rice	cytosol, mitochondrion	13.27	11.5
TraesCS1D01G068900.1	Wheat	mitochondrion	28.7	11.44
TraesCS2B01G560700.1	Wheat	plastid	27.16	11.41
HORVU1Hr1G014040.1	Barley	mitochondrion	29.32	11.4
OQU82833	Sorghum	cytosol	15.74	11.38
TraesCS2A01G530600.1	Wheat	cytosol	26.85	11.37
TraesCS1B01G072900.2	Wheat	mitochondrion	30.56	11.34
TraesCS2D01G532600.1	Wheat	plastid	27.16	11.34
TraesCS6B01G341800.2	Wheat	cytosol	13.89	11.28
TraesCS1D01G056200.1	Wheat	mitochondrion	28.7	11.27
TraesCS2D01G532300.1	Wheat	plastid	26.85	11.18
Os08t0110200-01	Rice	mitochondrion	27.47	11.15
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	28.4	11.08
HORVU1Hr1G010970.1	Barley	mitochondrion	28.09	11.02
HORVU0Hr1G031920.1	Barley	plastid	29.01	10.93
TraesCS1A01G055800.1	Wheat	mitochondrion	25.93	10.89
HORVU6Hr1G002890.6	Barley	cytosol, plastid	26.54	10.82
TraesCS6D01G076500.1	Wheat	plastid	15.12	10.82
TraesCS1B01G071600.1	Wheat	mitochondrion	28.09	10.73
TraesCS1D01G076900.1	Wheat	plastid	21.6	10.65
TraesCS1B01G092500.1	Wheat	mitochondrion	25.62	10.6
Os04t0349600-01	Rice	plastid	12.65	10.59
TraesCSU01G089800.1	Wheat	mitochondrion	11.42	10.54
HORVU1Hr1G013810.1	Barley	plastid	27.16	10.49
TraesCS1B01G038600.1	Wheat	cytosol	11.73	10.47
HORVU1Hr1G010890.5	Barley	cytosol	29.01	10.47
HORVU1Hr1G014060.1	Barley	plastid	28.7	10.45
HORVU1Hr1G011150.1	Barley	cytosol, plastid	28.09	10.31
HORVU1Hr1G011160.2	Barley	cytosol, plastid	28.4	10.28
KXG19780	Sorghum	cytosol	18.52	10.15
Zm00001d009735_P001	Maize	cytosol	29.94	9.97
TraesCS1A01G056000.1	Wheat	cytosol	12.35	9.95
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	21.91	9.9
Os04t0351333-00	Rice	cytosol	26.54	9.78
HORVU1Hr1G011300.3	Barley	plastid	27.78	9.78
TraesCS1D01G057800.1	Wheat	mitochondrion	10.8	9.64
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	9.57	9.54
OQU88581	Sorghum	cytosol	31.17	9.29
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	10.8	9.23
TraesCS1B01G315500.1	Wheat	mitochondrion	8.95	9.03
OQU82834	Sorghum	cytosol	26.23	8.83
TraesCS1A01G067800.1	Wheat	cytosol	10.19	8.82
TraesCS1A01G073800.1	Wheat	mitochondrion	8.95	8.71
TraesCS1D01G076400.1	Wheat	cytosol	9.26	8.26
TraesCS1D01G067600.1	Wheat	cytosol	9.26	8.22
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	8.64	8.19
TraesCS2D01G532200.1	Wheat	cytosol	6.79	7.51
TraesCS1D01G057700.1	Wheat	cytosol	7.1	7.08
TraesCS1A01G073600.1	Wheat	mitochondrion	8.33	6.89
TraesCS1A01G055600.1	Wheat	cytosol	6.79	6.77
TraesCS1B01G038300.1	Wheat	plastid	10.8	6.41
TraesCS1D01G058500.1	Wheat	plastid	10.8	6.14
HORVU1Hr1G011400.44	Barley	plastid	11.42	6.01
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	3.09	3.95
TraesCS1A01G074000.1	Wheat	mitochondrion	3.4	3.89
Os10t0497432-01	Rice	mitochondrion	3.09	3.76
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	1.85	2.63
TraesCS1A01G055500.1	Wheat	mitochondrion	1.23	1.84
TraesCS6B01G129100.1	Wheat	cytosol, plastid	0.93	1.04
TraesCS1D01G056600.1	Wheat	mitochondrion	0.62	0.99
TraesCS1A01G066600.1	Wheat	mitochondrion	0.62	0.76

Protein Annotations

EnsemblPlants:Bra027636.1	EnsemblPlants:Bra027636.1-P	EnsemblPlantsGene:Bra027636	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF993	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	TIGRFAMs:TIGR00756	UniParc:UPI000254247D
UniProt:M4EFS3	MapMan:35.1	:	:	:	:

Description

AT1G64580 (E=3e-113) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA09:-:7230605..7231579

Molecular Weight (calculated)

36712.2 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.052

Length

324 amino acids

Sequence
(BLAST)

001: MGYKPNVVVY NTLIDAYCKG GRVSDALQVF DVMKRKGVAP SVVTYNAVIR GLCKSGRWKE ADGLLSDMVE KRIDPNVVTF SVLIDACVKE GNVLEAKELY
101: KEMISRSVDP DIRVYNSLIN GLCIHGRLDE ARKMLDFMVS KGCVPNVVTY NTLIKGFCKS KRAHDGMKLF CEMNHKGVRG DAFTYNTLIH GYCRVGKFSV
201: AQKVMKRMSE SCVPRDVVTF NILLDCLCGI GKIEKALTIF RDMEKNEMEF DIFTYNIIIH GMYKAGKVED AMELFCSLND KGLKPDVVTY RTMISGLCRK
301: GLRHEADVLF RQMTEDEFLL LYNL

Best Arabidopsis Sequence Match ( AT1G62930.1 )
(BLAST)

001: MTSCVHLGIV ASQSKKMSLA KRFAQLRKAS PLFSLRGVYF SAASYDYREK LSRNVLLDLK LDDAVDLFGE MVQSRPLPSI VEFNKLLSAI AKMNKFDLVI
101: SLGERMQNLR ISYDLYSYNI LINCFCRRSQ LPLALAVLGK MMKLGYEPDI VTLSSLLNGY CHGKRISEAV ALVDQMFVME YQPNTVTFNT LIHGLFLHNK
201: ASEAVALIDR MVARGCQPDL FTYGTVVNGL CKRGDIDLAL SLLKKMEKGK IEADVVIYTT IIDALCNYKN VNDALNLFTE MDNKGIRPNV VTYNSLIRCL
301: CNYGRWSDAS RLLSDMIERK INPNVVTFSA LIDAFVKEGK LVEAEKLYDE MIKRSIDPDI FTYSSLINGF CMHDRLDEAK HMFELMISKD CFPNVVTYNT
401: LIKGFCKAKR VEEGMELFRE MSQRGLVGNT VTYNTLIQGL FQAGDCDMAQ KIFKKMVSDG VPPDIITYSI LLDGLCKYGK LEKALVVFEY LQKSKMEPDI
501: YTYNIMIEGM CKAGKVEDGW DLFCSLSLKG VKPNVIIYTT MISGFCRKGL KEEADALFRE MKEDGTLPNS GTYNTLIRAR LRDGDKAASA ELIKEMRSCG
601: FVGDASTISM VINMLHDGRL EKSYLEMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g62930, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ14]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.