Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • cytosol 1
  • mitochondrion 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, plastid, secretory
iPSORT:secretory
MultiLoc:cytosol
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G532200.1 Wheat cytosol 37.59 87.37
TraesCS2A01G531000.1 Wheat golgi 84.58 84.83
TraesCS2D01G532100.1 Wheat mitochondrion 86.2 84.83
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 63.58 84.74
TraesCS2A01G531100.1 Wheat cytosol 69.9 83.66
TraesCS2D01G532300.1 Wheat plastid 88.69 77.64
TraesCS2A01G530600.1 Wheat cytosol 87.08 77.52
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 40.38 62.64
TraesCS1A01G031600.1 Wheat cytosol 54.77 56.34
TraesCS1A01G073700.1 Wheat cytosol 30.1 53.25
TraesCS1A01G055600.1 Wheat cytosol 25.4 53.23
TraesCS1A01G067800.1 Wheat cytosol 29.22 53.21
TraesCS1A01G056000.1 Wheat cytosol 31.28 52.99
TraesCS1A01G054800.1 Wheat cytosol 44.79 52.41
TraesCS1A01G067700.1 Wheat extracellular 24.96 50.45
TraesCS1A01G067000.1 Wheat mitochondrion 53.01 50.42
TraesCS1A01G057300.1 Wheat cytosol 52.86 50.14
TraesCS6A01G014600.1 Wheat cytosol 28.93 49.87
TraesCS1A01G073600.1 Wheat mitochondrion 28.63 49.74
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 27.17 48.94
TraesCS1A01G054500.1 Wheat mitochondrion 55.36 48.33
TraesCS1A01G067600.1 Wheat mitochondrion 57.42 48.09
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 49.93 47.42
TraesCS1A01G067400.1 Wheat mitochondrion 56.83 46.91
TraesCS1A01G031700.1 Wheat plastid 50.81 46.69
TraesCS1A01G054700.2 Wheat mitochondrion 55.36 46.43
TraesCS1A01G055800.1 Wheat mitochondrion 51.84 45.78
TraesCS6A01G311600.1 Wheat mitochondrion 55.65 45.33
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 46.4 44.26
TraesCS6A01G083000.1 Wheat cytosol 29.22 43.64
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 27.75 39.05
TraesCS1A01G073800.1 Wheat mitochondrion 18.94 38.74
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 28.05 37.97
TraesCS6A01G015000.1 Wheat mitochondrion 22.61 37.11
VIT_14s0081g00110.t01 Wine grape cytosol 21.73 30.14
VIT_12s0028g02320.t01 Wine grape mitochondrion 20.7 29.56
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 10.87 29.25
PGSC0003DMT400052977 Potato cytosol 16.59 29.05
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 21.0 28.32
Solyc06g007280.2.1 Tomato cytosol 10.57 28.24
KRH39054 Soybean cytosol 20.56 28.17
KRH39074 Soybean cytosol 20.41 27.97
KRH39112 Soybean cytosol 20.41 27.97
Solyc06g005220.2.1 Tomato cytosol 16.59 27.83
Bra027636.1-P Field mustard cytosol 13.22 27.78
KRH39004 Soybean cytosol 20.26 27.77
KRH39057 Soybean cytosol 20.26 27.77
KRH08636 Soybean cytosol 21.15 27.59
TraesCS1A01G074000.1 Wheat mitochondrion 11.45 27.56
Solyc06g007810.1.1 Tomato cytosol 10.72 27.24
Bra006187.1-P Field mustard plastid 11.6 27.15
Bra036649.1-P Field mustard cytosol 15.57 27.11
KRH40513 Soybean plastid 13.95 27.07
KRH09082 Soybean cytosol 16.15 26.96
CDX68679 Canola cytosol 4.55 26.96
KRH39072 Soybean cytosol 19.53 26.81
VIT_14s0081g00270.t01 Wine grape plastid 22.76 26.72
TraesCS1A01G066600.1 Wheat mitochondrion 10.28 26.62
KRH08671 Soybean cytosol, mitochondrion 21.59 26.58
KRH08628 Soybean plastid 21.44 26.45
KRH17148 Soybean mitochondrion 21.15 26.42
TraesCS1A01G055500.1 Wheat mitochondrion 8.37 26.27
KRH09084 Soybean plastid 19.68 26.22
KRH08607 Soybean cytosol 21.59 26.2
KRH25652 Soybean cytosol, golgi 20.7 26.11
VIT_14s0081g00120.t01 Wine grape plastid 22.32 26.07
KRH31646 Soybean cytosol 19.82 26.06
Bra027029.1-P Field mustard mitochondrion 9.25 25.93
KRH08277 Soybean plastid 21.44 25.75
KRH39066 Soybean cytosol 20.85 25.59
KRH08639 Soybean mitochondrion, plastid 21.15 25.49
KRH09121 Soybean mitochondrion 19.82 25.28
PGSC0003DMT400008759 Potato cytosol 11.75 25.08
PGSC0003DMT400025087 Potato endoplasmic reticulum 18.21 25.05
KRH08625 Soybean plastid 21.15 25.0
KRH39050 Soybean mitochondrion 19.53 25.0
PGSC0003DMT400025067 Potato cytosol 17.47 25.0
KRH09154 Soybean mitochondrion 20.26 24.82
AT5G16640.1 Thale cress mitochondrion 18.36 24.8
KRH40400 Soybean plastid 21.0 24.78
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 18.94 24.57
Bra026882.1-P Field mustard cytosol 19.24 24.53
AT1G63330.2 Thale cress cytosol 20.12 24.51
VIT_14s0030g02280.t01 Wine grape plastid 19.97 24.24
KRH41817 Soybean mitochondrion 19.68 24.14
PGSC0003DMT400008757 Potato cytosol 17.62 24.1
VIT_14s0081g00280.t01 Wine grape mitochondrion 22.47 23.94
AT3G16710.1 Thale cress mitochondrion 17.77 23.87
KRH48615 Soybean mitochondrion 19.09 23.85
PGSC0003DMT400025074 Potato cytosol 19.24 23.73
Bra026884.1-P Field mustard cytosol 15.86 23.53
AT1G64580.1 Thale cress mitochondrion 18.06 23.52
Bra036651.1-P Field mustard mitochondrion 18.21 23.18
PGSC0003DMT400015293 Potato mitochondrion 20.7 23.11
PGSC0003DMT400015298 Potato mitochondrion 20.7 23.11
PGSC0003DMT400053185 Potato mitochondrion 19.97 23.05
AT1G64583.1 Thale cress mitochondrion 17.33 23.05
AT1G63400.1 Thale cress cytosol, plastid 19.38 22.88
AT1G62680.2 Thale cress plastid 18.36 22.81
Solyc04g080120.1.1 Tomato extracellular 20.41 22.71
AT1G12620.1 Thale cress cytosol, mitochondrion 20.7 22.71
Bra021192.1-P Field mustard plastid 16.74 22.62
AT1G62930.1 Thale cress plastid 20.85 22.58
AT1G62670.1 Thale cress mitochondrion 20.85 22.54
AT1G63080.3 Thale cress mitochondrion 20.26 22.48
Solyc06g007300.1.1 Tomato extracellular 19.53 22.47
Bra025516.1-P Field mustard cytosol, mitochondrion 15.71 22.43
Solyc06g007740.1.1 Tomato cytosol 19.38 22.37
Bra027658.1-P Field mustard cytosol, mitochondrion 17.77 22.28
AT1G62720.1 Thale cress mitochondrion 15.86 22.27
PGSC0003DMT400052971 Potato mitochondrion 19.38 22.26
AT1G63150.1 Thale cress mitochondrion 20.56 22.26
AT1G63130.1 Thale cress mitochondrion 20.56 22.22
KRH09095 Soybean plastid 19.09 22.22
AT1G63070.1 Thale cress mitochondrion 19.24 22.2
AT1G06580.1 Thale cress mitochondrion 16.3 22.2
AT1G12300.1 Thale cress mitochondrion 20.7 22.14
KRH09097 Soybean plastid 18.94 22.13
Bra027026.1-P Field mustard mitochondrion 16.89 21.99
Bra026971.1-P Field mustard mitochondrion 20.12 21.78
KRH08599 Soybean cytosol, plastid 21.15 21.52
Bra031731.1-P Field mustard mitochondrion 16.01 21.46
AT1G62590.1 Thale cress mitochondrion 19.97 21.45
VIT_14s0030g02260.t01 Wine grape cytosol 13.95 21.44
Bra016762.1-P Field mustard mitochondrion 19.09 21.42
AT1G62910.1 Thale cress mitochondrion 19.82 21.36
AT1G62914.1 Thale cress mitochondrion 16.45 21.21
Bra026958.1-P Field mustard mitochondrion 19.82 21.19
AT3G22470.1 Thale cress cytosol, mitochondrion 19.24 21.16
PGSC0003DMT400053556 Potato mitochondrion 14.24 21.13
PGSC0003DMT400056663 Potato plastid 18.21 21.09
PGSC0003DMT400056665 Potato mitochondrion 18.21 21.05
Bra028267.1-P Field mustard mitochondrion 19.09 20.77
PGSC0003DMT400053182 Potato cytosol 18.21 20.7
AT1G12775.1 Thale cress cytosol, mitochondrion 19.38 20.5
AT5G41170.1 Thale cress mitochondrion 15.86 20.49
AT4G26800.2 Thale cress mitochondrion, plastid 15.42 20.43
Bra026954.1-P Field mustard mitochondrion 19.38 20.31
Bra026401.1-P Field mustard plastid 15.71 20.0
Bra026836.1-P Field mustard cytosol, mitochondrion 14.39 19.96
PGSC0003DMT400008760 Potato mitochondrion 17.03 19.8
AT1G12700.2 Thale cress cytosol 17.77 19.58
Bra027726.1-P Field mustard mitochondrion 13.51 19.53
Bra026957.1-P Field mustard mitochondrion 17.18 19.4
AT1G64100.2 Thale cress cytosol 21.73 18.36
KRH09085 Soybean mitochondrion 18.94 18.32
KRH12873 Soybean cytosol 17.91 17.53
Bra027656.1-P Field mustard cytosol 22.03 15.94
KRH39064 Soybean cytosol 21.44 15.07
Bra016758.1-P Field mustard plastid 18.8 11.04
Protein Annotations
EnsemblPlants:TraesCS2A01G526200.1EnsemblPlantsGene:TraesCS2A01G526200Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF874
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segSUPFAM:SSF48452
TIGRFAMs:TIGR00756MapMan:35.1::::
Description
No Description!
Coordinates
chr2A:+:746620655..746622700
Molecular Weight (calculated)
74842.0 Da
IEP (calculated)
7.626
GRAVY (calculated)
0.208
Length
681 amino acids
Sequence
(BLAST)
001: MSRGAGARVV SPTLCTYSIL MDCCCRAGRP DLVVAFFGRL IRLGLRLEVI SVSNLLKGLC QAKRTNEAVA LLLHGTPELD CVPNVFSYSI VINGCFKEGE
101: VDKACNLFHG MIQLGVQPNV VIYTSIIDAL SKCRAMDKAE VVLQQMVDQG IEPNIRTYTT LIHGYSASGQ WKAAVRVFKE MASVGVLPNA VTLNSFMDSL
201: CKHRRTKEAR VIFDSMAAKG QKPDVVSYST MLSGYAKEGC FDDMTCLFNS MLQNGVVPNH HIFNILINAY AKRGLMDAAM HMFEVMRQQG VNPDVFSYQI
301: VMDSLCKMGR MDAALDKFNQ MVNQGVSPDI VVYRCLVLGS CSHGDFEKAK ELISEAVNRG LCSNSVFFYP VINDLCKEGK VKEAQDMFDF IVGIGQRPDV
401: IMYNSLMDGY CLVGKVEEAL RVLDAMKSVG LQPDAFTYGI LLNGYCKIGK IADGLSLFRE MSLNGVKPMT IMYNIILHGL FFSGRTVSAK EIFHTMNASG
501: IPVGVDTYNI VLSGLCKNNC TDEAIELFKK LRAMNVKINV IILNTMISAM FKTRRIEEAK DLFATISAIG LVPSVVTYSV MMTNFIKEGL LAEADDMFLA
601: MEKASCAPNS SLLNQVVRAL LEKGAVVKAA TYLAKLDAKQ LSVEASTISL IVSLFSGEGK LREHVELLPV KYQPPESSAD N
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.