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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G055300.1 Wheat cytosol 72.31 91.26
TraesCS1A01G054700.2 Wheat mitochondrion 89.87 86.33
TraesCS1A01G055600.1 Wheat cytosol 34.23 82.15
TraesCS1A01G056000.1 Wheat cytosol 38.97 75.62
TraesCS1A01G054800.1 Wheat cytosol 56.41 75.6
TraesCS1A01G055800.1 Wheat mitochondrion 71.92 72.76
TraesCS1A01G067700.1 Wheat extracellular 30.26 70.03
TraesCS1B01G071600.1 Wheat mitochondrion 75.9 69.81
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 63.21 68.76
TraesCS1A01G057300.1 Wheat cytosol 62.95 68.38
TraesCS1A01G073600.1 Wheat mitochondrion 34.23 68.11
TraesCS1A01G073700.1 Wheat cytosol 32.82 66.49
TraesCS1A01G067600.1 Wheat mitochondrion 68.08 65.31
TraesCS1A01G067800.1 Wheat cytosol 31.28 65.24
TraesCS1A01G067000.1 Wheat mitochondrion 59.87 65.22
TraesCS1A01G067400.1 Wheat mitochondrion 67.31 63.64
TraesCS6A01G311600.1 Wheat mitochondrion 65.51 61.12
TraesCS1A01G073800.1 Wheat mitochondrion 25.51 59.76
TraesCS1A01G031600.1 Wheat cytosol 50.64 59.67
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 36.41 55.58
TraesCS2A01G531000.1 Wheat golgi 48.33 55.52
TraesCS2A01G526200.1 Wheat golgi 48.33 55.36
TraesCS2A01G531100.1 Wheat cytosol 40.13 55.01
TraesCS1A01G055500.1 Wheat mitochondrion 15.13 54.38
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 25.64 52.91
TraesCS1A01G031700.1 Wheat plastid 50.26 52.9
Zm00001d007559_P001 Maize plastid 54.87 52.39
Zm00001d007531_P001 Maize plastid 54.62 52.33
Zm00001d007548_P001 Maize plastid 54.62 52.33
TraesCS2A01G530600.1 Wheat cytosol 51.28 52.29
KXG28799 Sorghum plastid 50.9 52.24
Zm00001d007555_P001 Maize plastid 54.1 51.84
Zm00001d007534_P001 Maize plastid 51.54 51.74
TraesCS1A01G066600.1 Wheat mitochondrion 17.18 50.95
KXG35774 Sorghum cytosol, mitochondrion 30.38 50.11
TraesCS1A01G074000.1 Wheat mitochondrion 17.82 49.12
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 47.69 48.56
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 31.03 48.11
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 29.1 46.9
TraesCS6A01G014600.1 Wheat cytosol 23.08 45.57
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 40.0 43.7
Os04t0351333-00 Rice cytosol 48.85 43.34
TraesCS6A01G015000.1 Wheat mitochondrion 21.92 41.2
TraesCS6A01G083000.1 Wheat cytosol 23.72 40.57
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 12.44 38.34
Os04t0349600-01 Rice plastid 18.59 37.47
KRH39054 Soybean cytosol 20.9 32.8
KRH39074 Soybean cytosol 20.64 32.39
KRH39112 Soybean cytosol 20.26 31.79
KRH39004 Soybean cytosol 20.0 31.39
KRH39057 Soybean cytosol 20.0 31.39
Solyc06g007280.2.1 Tomato cytosol 10.26 31.37
KRH39072 Soybean cytosol 19.62 30.85
AT1G63330.2 Thale cress cytosol 21.79 30.41
VIT_12s0028g02320.t01 Wine grape mitochondrion 18.59 30.4
VIT_14s0081g00110.t01 Wine grape cytosol 18.97 30.14
Bra027636.1-P Field mustard cytosol 12.44 29.94
KRH09084 Soybean plastid 19.49 29.75
KRH40513 Soybean plastid 13.33 29.63
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 19.1 29.5
Solyc06g005220.2.1 Tomato cytosol 15.26 29.31
KRH17148 Soybean mitochondrion 20.38 29.17
Solyc06g007810.1.1 Tomato cytosol 10.0 29.1
PGSC0003DMT400052977 Potato cytosol 14.23 28.53
KRH39066 Soybean cytosol 20.13 28.29
Bra026882.1-P Field mustard cytosol 19.36 28.28
Bra006187.1-P Field mustard plastid 10.51 28.18
KRH08636 Soybean cytosol 18.85 28.16
Bra027029.1-P Field mustard mitochondrion 8.72 27.98
KRH09082 Soybean cytosol 14.62 27.94
PGSC0003DMT400008759 Potato cytosol 11.41 27.9
Bra026884.1-P Field mustard cytosol 16.41 27.89
KRH48615 Soybean mitochondrion 19.36 27.71
PGSC0003DMT400025087 Potato endoplasmic reticulum 17.56 27.68
VIT_14s0081g00120.t01 Wine grape plastid 20.51 27.44
PGSC0003DMT400025067 Potato cytosol 16.67 27.31
PGSC0003DMT400008757 Potato cytosol 17.44 27.31
KRH08628 Soybean plastid 19.23 27.17
KRH09121 Soybean mitochondrion 18.59 27.15
AT1G62670.1 Thale cress mitochondrion 21.92 27.14
Bra036649.1-P Field mustard cytosol 13.59 27.11
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 18.21 27.05
AT5G16640.1 Thale cress mitochondrion 17.44 26.98
KRH08277 Soybean plastid 19.62 26.98
KRH08671 Soybean cytosol, mitochondrion 19.1 26.94
KRH08607 Soybean cytosol 19.36 26.92
AT1G62930.1 Thale cress plastid 21.41 26.55
KRH25652 Soybean cytosol, golgi 18.33 26.48
KRH08639 Soybean mitochondrion, plastid 19.1 26.37
AT1G62590.1 Thale cress mitochondrion 21.41 26.34
PGSC0003DMT400025074 Potato cytosol 18.59 26.27
AT3G22470.1 Thale cress cytosol, mitochondrion 20.77 26.17
AT1G63400.1 Thale cress cytosol, plastid 19.36 26.17
CDX68679 Canola cytosol 3.85 26.09
KRH31646 Soybean cytosol 17.31 26.06
KRH41817 Soybean mitochondrion 18.46 25.95
KRH09154 Soybean mitochondrion 18.46 25.9
AT1G63080.3 Thale cress mitochondrion 20.38 25.9
AT1G63130.1 Thale cress mitochondrion 20.9 25.87
VIT_14s0081g00270.t01 Wine grape plastid 19.23 25.86
Bra021192.1-P Field mustard plastid 16.67 25.79
AT1G63070.1 Thale cress mitochondrion 19.49 25.76
AT1G12300.1 Thale cress mitochondrion 21.03 25.75
Bra016762.1-P Field mustard mitochondrion 20.0 25.7
KRH08625 Soybean plastid 18.97 25.69
KRH40400 Soybean plastid 18.97 25.65
Bra026971.1-P Field mustard mitochondrion 20.64 25.6
AT1G12620.1 Thale cress cytosol, mitochondrion 20.26 25.44
Bra026958.1-P Field mustard mitochondrion 20.64 25.27
Bra031731.1-P Field mustard mitochondrion 16.41 25.2
VIT_14s0081g00280.t01 Wine grape mitochondrion 20.64 25.2
Bra025516.1-P Field mustard cytosol, mitochondrion 15.38 25.16
VIT_14s0030g02280.t01 Wine grape plastid 18.08 25.13
AT1G63150.1 Thale cress mitochondrion 20.26 25.12
AT1G62910.1 Thale cress mitochondrion 20.26 25.0
KRH39050 Soybean mitochondrion 16.92 24.81
Bra027658.1-P Field mustard cytosol, mitochondrion 17.18 24.68
Bra036651.1-P Field mustard mitochondrion 16.92 24.67
AT1G12775.1 Thale cress cytosol, mitochondrion 20.26 24.53
Solyc06g007300.1.1 Tomato extracellular 18.59 24.49
AT3G16710.1 Thale cress mitochondrion 15.9 24.46
Bra028267.1-P Field mustard mitochondrion 19.62 24.44
AT1G62914.1 Thale cress mitochondrion 16.54 24.43
KRH09097 Soybean plastid 18.08 24.19
AT1G12700.2 Thale cress cytosol 19.1 24.11
PGSC0003DMT400056665 Potato mitochondrion 18.21 24.11
KRH09095 Soybean plastid 18.08 24.1
AT5G41170.1 Thale cress mitochondrion 16.28 24.1
PGSC0003DMT400053185 Potato mitochondrion 18.08 23.9
Bra026954.1-P Field mustard mitochondrion 19.87 23.85
Bra026836.1-P Field mustard cytosol, mitochondrion 15.0 23.83
AT1G64583.1 Thale cress mitochondrion 15.64 23.83
AT1G62720.1 Thale cress mitochondrion 14.74 23.71
VIT_14s0030g02260.t01 Wine grape cytosol 13.46 23.7
PGSC0003DMT400052971 Potato mitochondrion 17.95 23.61
Solyc06g007740.1.1 Tomato cytosol 17.82 23.56
PGSC0003DMT400008760 Potato mitochondrion 17.69 23.55
Bra026957.1-P Field mustard mitochondrion 18.21 23.55
Solyc04g080120.1.1 Tomato extracellular 18.46 23.53
AT1G64580.1 Thale cress mitochondrion 15.77 23.52
Bra027026.1-P Field mustard mitochondrion 15.77 23.52
PGSC0003DMT400056663 Potato plastid 17.56 23.3
AT1G62680.2 Thale cress plastid 16.28 23.18
AT1G06580.1 Thale cress mitochondrion 14.74 23.0
PGSC0003DMT400015293 Potato mitochondrion 17.95 22.95
PGSC0003DMT400015298 Potato mitochondrion 17.95 22.95
PGSC0003DMT400053182 Potato cytosol 17.31 22.54
Bra026401.1-P Field mustard plastid 15.38 22.43
KRH08599 Soybean cytosol, plastid 19.1 22.27
PGSC0003DMT400053556 Potato mitochondrion 13.08 22.22
Bra027726.1-P Field mustard mitochondrion 12.82 21.23
KRH09085 Soybean mitochondrion 18.72 20.74
AT1G64100.2 Thale cress cytosol 21.28 20.6
AT4G26800.2 Thale cress mitochondrion, plastid 13.21 20.04
Bra027656.1-P Field mustard cytosol 23.08 19.13
KRH12873 Soybean cytosol 16.67 18.68
KRH39064 Soybean cytosol 21.15 17.03
Bra016758.1-P Field mustard plastid 19.62 13.2
Protein Annotations
EnsemblPlants:TraesCS1A01G054500.1EnsemblPlantsGene:TraesCS1A01G054500Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF874
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segSignalP:SignalP-noTM
TIGRFAMs:TIGR00756MapMan:35.1::::
Description
No Description!
Coordinates
chr1A:-:36171530..36174659
Molecular Weight (calculated)
85806.9 Da
IEP (calculated)
6.958
GRAVY (calculated)
0.067
Length
780 amino acids
Sequence
(BLAST)
001: MMPGRSLNGF LAALARATSS AAPACIRDGP VLVVALFNRL CREQAVVRVA PLTVHTYGIL MDCCCRTSRP DLGLAFFGRL LRTGLKTNEI TATTFLKCLC
101: YAKRTDEAVN VLLHRMPELG CVPDAFAYST VLKSLCDNSM SQQGLDLLHM MAKEGGGCSP NVVAYSTVIH GFFKEGEIGK ACNLFHEMMQ QGVEPNVWTY
201: SSIIDALCKA RAMDKAELVL QQMVNKGVQP NNVTYSCMIH GYSTSGRWKE AAKLLREMKS RGLILDIVTR NSFLASLCKH GRSKEAAEFL DSMTAKGHKP
301: DIVSYCILLH GYGTEGCFAD MIDVFYSMES NGIAADCHVF NILINGYAKR GMTEEAMLIF TEMRGQGVSP DVVTYSIVIA ALSRMGKLTD AIEKFNEMTA
401: LEVQPDTTVY HSLIQGCCID GDLVKAKELM FEMMNGGIPR PNIVFFNSVI NSLCKEGRVM DAHDVLDLVI GIGERPNVIT FNSLIDGYCL VGNMDKAFKI
501: LDVMESVGVE PNVVTYSTLL DGYSKNRRID DALTLFREMP RKRIKPDTVT YGIMLDGLFR AGRTVAAMEM FHEMIESGTT VDILIYNIKL GGLCRNNCVD
601: EAIALFQKLR AMNVKFNIEI LNTMINAMYK VQRKEEAKEL FATISANGLV PNESTYAVVI RNLLKGGAVE DADNMFSSKD NSGIVPSSRL INDIIRMLLE
701: KGEIAKAGNY LSKVDGKSIS LEASTASLML SLFSRKGKHQ EDIKLLPANI FKEIFYGILG VMTSDGDLGK DSSTASCDRG
Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)
001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS
Arabidopsis Description
RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.