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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 3
  • plastid 5
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007548_P001 Maize plastid 80.79 75.43
Zm00001d007534_P001 Maize plastid 76.97 75.29
Zm00001d007531_P001 Maize plastid 80.39 75.06
Zm00001d007555_P001 Maize plastid 80.0 74.69
Zm00001d007559_P001 Maize plastid 80.26 74.66
KXG35774 Sorghum cytosol, mitochondrion 40.79 65.54
TraesCS1D01G058500.1 Wheat plastid 43.82 58.42
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 59.34 57.31
TraesCS1D01G057800.1 Wheat mitochondrion 27.24 57.02
TraesCS1D01G056600.1 Wheat mitochondrion 15.13 56.93
TraesCS1A01G055500.1 Wheat mitochondrion 16.18 56.68
TraesCS1B01G038400.1 Wheat cytosol 45.26 56.58
TraesCS1A01G031600.1 Wheat cytosol 49.21 56.5
TraesCS1B01G039700.1 Wheat cytosol 45.0 56.25
TraesCS1B01G315500.1 Wheat mitochondrion 23.68 56.07
TraesCS1A01G073800.1 Wheat mitochondrion 24.47 55.86
TraesCS1A01G073700.1 Wheat cytosol 28.29 55.84
TraesCS1D01G058000.1 Wheat cytosol 29.74 55.66
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 21.71 55.56
TraesCS1B01G039200.1 Wheat mitochondrion 57.24 55.48
TraesCS1A01G067700.1 Wheat extracellular 24.47 55.19
TraesCS1B01G038500.1 Wheat mitochondrion 57.37 55.19
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 57.37 55.05
TraesCS1B01G039100.1 Wheat mitochondrion 56.58 54.92
TraesCS1A01G066600.1 Wheat mitochondrion 18.95 54.75
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 50.26 54.65
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 24.34 54.09
TraesCS1D01G076400.1 Wheat cytosol 25.79 53.99
TraesCS1D01G068600.1 Wheat plastid 24.08 53.82
TraesCS1A01G067600.1 Wheat mitochondrion 57.5 53.75
TraesCS2B01G126900.1 Wheat cytosol 26.97 53.66
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 49.21 53.66
HORVU1Hr1G013810.1 Barley plastid 59.21 53.64
TraesCS1D01G056200.1 Wheat mitochondrion 58.16 53.58
TraesCS1A01G073600.1 Wheat mitochondrion 27.63 53.57
TraesCS1B01G085900.1 Wheat mitochondrion 57.37 53.56
TraesCS1D01G068400.1 Wheat mitochondrion 57.89 53.46
TraesCS1A01G031700.1 Wheat plastid 52.11 53.44
HORVU6Hr1G017870.2 Barley mitochondrion 21.05 53.33
TraesCS1A01G067400.1 Wheat mitochondrion 57.89 53.33
TraesCS6D01G083300.1 Wheat mitochondrion 31.18 53.14
HORVU1Hr1G004750.6 Barley plastid 55.79 53.13
TraesCS1A01G054800.1 Wheat cytosol 40.66 53.09
TraesCS1A01G054700.2 Wheat mitochondrion 56.71 53.08
TraesCS1D01G068500.1 Wheat mitochondrion 56.71 53.08
TraesCS1D01G068900.1 Wheat mitochondrion 56.71 53.01
TraesCS1D01G058400.1 Wheat cytosol 35.92 53.01
HORVU6Hr1G076780.7 Barley mitochondrion 57.37 52.91
TraesCS6B01G127200.1 Wheat cytosol 23.95 52.91
TraesCS1D01G068800.1 Wheat plastid 56.71 52.82
TraesCS1B01G075300.1 Wheat cytosol 41.45 52.76
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 15.79 52.63
TraesCS6A01G311600.1 Wheat mitochondrion 57.89 52.63
TraesCS1D01G033000.1 Wheat cytosol 27.89 52.48
TraesCS1B01G038200.1 Wheat mitochondrion 43.68 52.45
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 53.82 52.44
TraesCS1D01G076500.1 Wheat mitochondrion 45.79 52.41
TraesCS1A01G055800.1 Wheat mitochondrion 53.16 52.4
TraesCS6D01G290900.1 Wheat mitochondrion 50.53 52.39
HORVU1Hr1G014040.1 Barley mitochondrion 57.37 52.34
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 57.11 52.29
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 46.18 52.15
TraesCS1B01G085300.1 Wheat mitochondrion 54.08 51.89
TraesCS1B01G092500.1 Wheat mitochondrion 53.29 51.72
HORVU1Hr1G010970.1 Barley mitochondrion 56.18 51.69
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 34.34 51.68
TraesCS1B01G038300.1 Wheat plastid 37.11 51.65
TraesCS1B01G072300.1 Wheat plastid 38.42 51.41
TraesCS1B01G072400.1 Wheat cytosol 46.97 51.37
TraesCS1D01G055300.1 Wheat cytosol 41.58 51.13
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 32.5 51.03
TraesCS1A01G054500.1 Wheat mitochondrion 52.24 50.9
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 33.68 50.89
TraesCS1A01G074000.1 Wheat mitochondrion 18.95 50.88
TraesCS1B01G085400.1 Wheat cytosol 42.89 50.86
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 32.11 50.83
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 42.63 50.7
TraesCS1B01G038600.1 Wheat cytosol 24.21 50.69
HORVU1Hr1G011400.44 Barley plastid 41.05 50.65
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 47.76 50.63
TraesCS1A01G067000.1 Wheat mitochondrion 47.63 50.56
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 25.13 50.53
HORVU0Hr1G035310.1 Barley cytosol 38.68 50.52
TraesCS6D01G083400.1 Wheat mitochondrion 32.76 50.51
TraesCS1D01G056700.1 Wheat cytosol 40.26 50.41
TraesCS6B01G127500.1 Wheat cytosol 32.37 50.2
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 43.82 50.15
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 28.55 50.12
TraesCS1D01G068700.1 Wheat cytosol 28.95 50.11
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 31.71 50.1
TraesCS1A01G056000.1 Wheat cytosol 26.45 50.0
TraesCS6D01G083100.1 Wheat cytosol 32.24 50.0
TraesCS6B01G341800.2 Wheat cytosol 26.18 49.87
TraesCS1B01G073200.1 Wheat cytosol 19.87 49.84
TraesCS1D01G069100.1 Wheat mitochondrion 41.97 49.61
TraesCS1B01G073100.1 Wheat cytosol 39.47 49.51
HORVU0Hr1G031920.1 Barley plastid 55.92 49.42
TraesCS1B01G086000.1 Wheat plastid 44.61 49.42
TraesCS1A01G057300.1 Wheat cytosol 46.45 49.16
TraesCS1B01G072900.2 Wheat mitochondrion 56.32 49.03
TraesCS1D01G076700.1 Wheat cytosol 21.45 48.8
TraesCS1A01G067800.1 Wheat cytosol 23.95 48.66
TraesCS1A01G055600.1 Wheat cytosol 20.79 48.62
TraesCS1B01G084800.1 Wheat cytosol 29.61 48.49
TraesCS1B01G071600.1 Wheat mitochondrion 53.95 48.35
HORVU1Hr1G011150.1 Barley cytosol, plastid 55.13 47.45
HORVU1Hr1G014060.1 Barley plastid 55.53 47.42
HORVU1Hr1G011160.2 Barley cytosol, plastid 55.79 47.37
TraesCS1D01G067600.1 Wheat cytosol 22.63 47.12
TraesCS1B01G092600.1 Wheat plastid 31.97 47.0
TraesCS1D01G076900.1 Wheat plastid 40.53 46.88
TraesCS1D01G057700.1 Wheat cytosol 20.0 46.77
HORVU1Hr1G010890.5 Barley cytosol 54.87 46.44
HORVU1Hr1G011250.1 Barley cytosol 17.76 45.76
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 45.53 45.17
HORVU1Hr1G011300.3 Barley plastid 54.61 45.11
TraesCS1B01G072700.1 Wheat cytosol 30.13 44.9
OQU82832 Sorghum cytosol 16.58 44.06
OQU82836 Sorghum cytosol 35.26 43.79
OQU82831 Sorghum cytosol 35.0 43.39
OQU82827 Sorghum cytosol 45.39 43.29
OQU82823 Sorghum cytosol 45.13 43.04
EES07882 Sorghum cytosol 43.82 42.86
KXG27690 Sorghum cytosol, plastid 40.79 42.41
Os04t0349600-01 Rice plastid 21.58 42.38
KXG19780 Sorghum cytosol 32.37 41.62
OQU80148 Sorghum mitochondrion 39.34 41.13
EES09203 Sorghum cytosol 43.03 40.98
Os04t0351333-00 Rice cytosol 47.24 40.84
OQU82833 Sorghum cytosol 23.95 40.62
OQU88594 Sorghum cytosol 27.76 40.42
EER95949 Sorghum mitochondrion 34.74 39.82
TraesCS6B01G129100.1 Wheat cytosol, plastid 13.95 36.81
KXG34536 Sorghum mitochondrion 27.5 36.54
Solyc06g007280.2.1 Tomato cytosol 11.58 34.51
OQU82856 Sorghum cytosol 33.55 33.91
OQU82834 Sorghum cytosol 41.32 32.61
KRH39004 Soybean cytosol 20.0 30.58
KRH39074 Soybean cytosol 19.87 30.38
KRH39054 Soybean cytosol 19.74 30.18
KRH39072 Soybean cytosol 19.34 29.64
KRH39112 Soybean cytosol 19.34 29.58
AT1G63330.2 Thale cress cytosol 21.71 29.52
KRH39057 Soybean cytosol 19.21 29.38
VIT_14s0081g00110.t01 Wine grape cytosol 18.95 29.33
PGSC0003DMT400052977 Potato cytosol 15.0 29.31
KRH40513 Soybean plastid 13.42 29.06
Bra027636.1-P Field mustard cytosol 12.37 29.01
VIT_12s0028g02320.t01 Wine grape mitochondrion 18.16 28.93
VIT_14s0081g00120.t01 Wine grape plastid 21.71 28.3
Bra026882.1-P Field mustard cytosol 19.61 27.9
PGSC0003DMT400008759 Potato cytosol 11.71 27.9
KRH09084 Soybean plastid 18.68 27.79
Bra021192.1-P Field mustard plastid 18.42 27.78
Bra036649.1-P Field mustard cytosol 14.21 27.62
KRH39066 Soybean cytosol 20.13 27.57
Bra026884.1-P Field mustard cytosol 16.58 27.45
Solyc06g005220.2.1 Tomato cytosol 14.61 27.34
AT1G63400.1 Thale cress cytosol, plastid 20.66 27.21
PGSC0003DMT400025067 Potato cytosol 16.97 27.1
AT5G16640.1 Thale cress mitochondrion 17.89 26.98
AT1G63080.3 Thale cress mitochondrion 21.71 26.87
PGSC0003DMT400025087 Potato endoplasmic reticulum 17.5 26.87
AT1G62930.1 Thale cress plastid 22.24 26.87
KRH41817 Soybean mitochondrion 19.61 26.85
AT1G62590.1 Thale cress mitochondrion 22.37 26.81
KRH17148 Soybean mitochondrion 19.21 26.79
Bra026971.1-P Field mustard mitochondrion 22.11 26.71
AT1G62670.1 Thale cress mitochondrion 22.11 26.67
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 18.42 26.67
AT1G62910.1 Thale cress mitochondrion 22.11 26.58
VIT_14s0081g00270.t01 Wine grape plastid 20.26 26.55
AT1G63070.1 Thale cress mitochondrion 20.53 26.44
AT1G64580.1 Thale cress mitochondrion 18.03 26.2
AT1G63130.1 Thale cress mitochondrion 21.71 26.19
Bra006187.1-P Field mustard plastid 10.0 26.12
PGSC0003DMT400008757 Potato cytosol 17.11 26.1
KRH48615 Soybean mitochondrion 18.68 26.05
KRH08636 Soybean cytosol 17.89 26.05
Bra025516.1-P Field mustard cytosol, mitochondrion 16.32 26.0
KRH31646 Soybean cytosol 17.63 25.87
Bra036651.1-P Field mustard mitochondrion 18.16 25.79
Bra027658.1-P Field mustard cytosol, mitochondrion 18.42 25.78
Bra026958.1-P Field mustard mitochondrion 21.58 25.75
KRH08628 Soybean plastid 18.68 25.72
AT3G22470.1 Thale cress cytosol, mitochondrion 20.92 25.69
VIT_14s0081g00280.t01 Wine grape mitochondrion 21.58 25.67
AT1G12300.1 Thale cress mitochondrion 21.45 25.59
KRH08277 Soybean plastid 19.08 25.57
Bra028267.1-P Field mustard mitochondrion 21.05 25.56
KRH09154 Soybean mitochondrion 18.68 25.54
AT3G16710.1 Thale cress mitochondrion 16.97 25.44
AT1G63150.1 Thale cress mitochondrion 21.05 25.44
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 16.84 25.35
AT1G62914.1 Thale cress mitochondrion 17.5 25.19
KRH39050 Soybean mitochondrion 17.63 25.19
AT1G62720.1 Thale cress mitochondrion 16.05 25.15
AT1G12620.1 Thale cress cytosol, mitochondrion 20.53 25.12
Bra027029.1-P Field mustard mitochondrion 8.03 25.1
Bra031731.1-P Field mustard mitochondrion 16.71 25.0
Solyc06g007810.1.1 Tomato cytosol 8.82 25.0
KRH08639 Soybean mitochondrion, plastid 18.55 24.96
AT5G41170.1 Thale cress mitochondrion 17.24 24.86
Solyc06g007300.1.1 Tomato extracellular 19.34 24.83
KRH25652 Soybean cytosol, golgi 17.63 24.81
AT1G64583.1 Thale cress mitochondrion 16.71 24.8
KRH08671 Soybean cytosol, mitochondrion 18.03 24.77
PGSC0003DMT400053185 Potato mitochondrion 19.21 24.75
KRH08625 Soybean plastid 18.68 24.65
PGSC0003DMT400056665 Potato mitochondrion 19.08 24.62
AT1G12775.1 Thale cress cytosol, mitochondrion 20.79 24.53
KRH09121 Soybean mitochondrion 17.24 24.53
PGSC0003DMT400025074 Potato cytosol 17.76 24.46
KRH40400 Soybean plastid 18.55 24.44
VIT_14s0030g02280.t01 Wine grape plastid 18.03 24.42
AT1G62680.2 Thale cress plastid 17.5 24.27
Bra016762.1-P Field mustard mitochondrion 19.34 24.22
Solyc06g007740.1.1 Tomato cytosol 18.68 24.07
KRH08607 Soybean cytosol 17.76 24.06
KRH09082 Soybean cytosol 12.76 23.77
Bra026954.1-P Field mustard mitochondrion 20.26 23.69
AT1G12700.2 Thale cress cytosol 19.21 23.62
AT1G06580.1 Thale cress mitochondrion 15.53 23.6
Bra027726.1-P Field mustard mitochondrion 14.61 23.57
PGSC0003DMT400052971 Potato mitochondrion 18.29 23.44
Bra026836.1-P Field mustard cytosol, mitochondrion 15.13 23.42
Bra026957.1-P Field mustard mitochondrion 18.55 23.38
Solyc04g080120.1.1 Tomato extracellular 18.82 23.37
Bra027026.1-P Field mustard mitochondrion 16.05 23.33
PGSC0003DMT400053556 Potato mitochondrion 14.08 23.31
PGSC0003DMT400056663 Potato plastid 18.03 23.3
PGSC0003DMT400015293 Potato mitochondrion 18.68 23.28
PGSC0003DMT400015298 Potato mitochondrion 18.68 23.28
KRH09097 Soybean plastid 17.76 23.16
PGSC0003DMT400008760 Potato mitochondrion 17.63 22.87
KRH09095 Soybean plastid 17.5 22.73
PGSC0003DMT400053182 Potato cytosol 17.37 22.04
AT4G26800.2 Thale cress mitochondrion, plastid 14.74 21.79
Bra026401.1-P Field mustard plastid 15.26 21.68
KRH08599 Soybean cytosol, plastid 18.68 21.23
VIT_14s0030g02260.t01 Wine grape cytosol 12.24 20.99
KRH09085 Soybean mitochondrion 19.08 20.6
CDX68679 Canola cytosol 3.03 20.0
OQU88581 Sorghum cytosol 28.55 19.96
AT1G64100.2 Thale cress cytosol 20.92 19.73
KRH12873 Soybean cytosol 16.58 18.1
Bra027656.1-P Field mustard cytosol 21.45 17.32
KRH39064 Soybean cytosol 21.32 16.72
Bra016758.1-P Field mustard plastid 20.0 13.11
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1UniProt:A0A1B6PT01GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990EnsemblPlants:KXG28799ProteinID:KXG28799ProteinID:KXG28799.1PFAM:PF01535
PFAM:PF12854PFAM:PF13041PFscan:PS51257PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF874
InterPro:Pentatricopeptide_repeatEnsemblPlantsGene:SORBI_3005G168000SUPFAM:SSF48452TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI00081AC3D7
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr5:-:64657544..64660701
Molecular Weight (calculated)
83772.4 Da
IEP (calculated)
7.972
GRAVY (calculated)
0.079
Length
760 amino acids
Sequence
(BLAST)
001: MWSCARISSA VFTTAACSSP SPRAPHLALA TATARVRKGT FRPEEAHDLF DELLHQATPV PGRQLNGFLA ALARAPASAA CRDGPALAVA LFNRVSRAHG
101: PRVLSPTLHT YGILMDCCTR AHRPKLTLAF FGQVLKTGLG IDTIMISNLL RGLCEAKRTA EALDILLHRM PHLGCVPDVF SYCIVLKSLC SDRKSGQADE
201: LLRMMAEGGA VCLPNAVAYN TVIDGFFKEG DVNKACDLFN EMVQRGISPD LSTYNCVVNA LCKARAMDKA EAILRQMVDK GVLPDNWTYN SLIYGYSSTG
301: QWKEAVRVSK KMTSQGILPD VVTLNSLMAS LCKHGKIKDA RDVFDSMAMK GQKTDIFSYK IMLNGYATKG CLVDLTELFN LMLSDGIAPD SHIFNVLIKA
401: YAKCGMLDRA TIIFNEMREQ GVEPDVVTYS TVIAALCRIG KMDDAVEKFN QMIDQGVAPS ISTYHFLIQG FCTHGDLLKA KDLVLQMMNK VGKMENALRV
501: FDVMVSAGIQ PNVVVYGTLV NGYCKVGRID EGLSLFREIL HKGIKPSTTL YNIILHGLFQ AGRTVPAKVK FHEMTESGIA MDRYTYSIVL GGLFKNSCSD
601: EAILLFKELH AMNVKIDITT LNIMIAGMFQ IRRVEEAKDL FASISRSGLV PSVVTYSIMM TNLIKEGLVE EADDMFSSME NAGCEQPNSQ LLNHVVRELL
701: EKREIVRAGT YLSKIDERSF SLDHSTTTLL IDLFSSKGTC REHIRFLPAK YHFLAEASPC
Best Arabidopsis Sequence Match ( AT1G63130.1 )
(BLAST)
001: MRRLFAISST GNRFVHRSLL GKGKCGTAPP SFSHCSFWVR DFSGVRYDYR KISINRLNDL KLDDAVNLFG DMVKSRPFPS IVEFSKLLSA IAKMNKFDLV
101: ISLGEQMQNL GISHNLYTYS ILINCFCRRS QLSLALAVLA KMMKLGYEPD IVTLNSLLNG FCHGNRISDA VSLVGQMVEM GYQPDSFTFN TLIHGLFRHN
201: RASEAVALVD RMVVKGCQPD LVTYGIVVNG LCKRGDIDLA LSLLKKMEQG KIEPGVVIYN TIIDALCNYK NVNDALNLFT EMDNKGIRPN VVTYNSLIRC
301: LCNYGRWSDA SRLLSDMIER KINPNVVTFS ALIDAFVKEG KLVEAEKLYD EMIKRSIDPD IFTYSSLING FCMHDRLDEA KHMFELMISK DCFPNVVTYN
401: TLIKGFCKAK RVDEGMELFR EMSQRGLVGN TVTYTTLIHG FFQARECDNA QIVFKQMVSD GVLPDIMTYS ILLDGLCNNG KVETALVVFE YLQRSKMEPD
501: IYTYNIMIEG MCKAGKVEDG WDLFCSLSLK GVKPNVVTYT TMMSGFCRKG LKEEADALFR EMKEEGPLPD SGTYNTLIRA HLRDGDKAAS AELIREMRSC
601: RFVGDASTIG LVTNMLHDGR LDKSFLKMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g63130, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.