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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 3
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400056665 Potato mitochondrion 86.73 86.59
PGSC0003DMT400008759 Potato cytosol 46.09 84.95
PGSC0003DMT400008757 Potato cytosol 71.43 84.34
Solyc06g007810.1.1 Tomato cytosol 36.56 80.22
PGSC0003DMT400008760 Potato mitochondrion 79.08 79.35
PGSC0003DMT400025074 Potato cytosol 71.77 76.45
PGSC0003DMT400025087 Potato endoplasmic reticulum 62.59 74.34
PGSC0003DMT400052977 Potato cytosol 48.81 73.78
PGSC0003DMT400053185 Potato mitochondrion 72.96 72.71
PGSC0003DMT400052971 Potato mitochondrion 72.62 72.01
PGSC0003DMT400025067 Potato cytosol 57.31 70.8
PGSC0003DMT400053182 Potato cytosol 70.75 69.45
PGSC0003DMT400053556 Potato mitochondrion 52.21 66.88
PGSC0003DMT400015293 Potato mitochondrion 50.68 48.85
PGSC0003DMT400015298 Potato mitochondrion 50.68 48.85
VIT_12s0028g02320.t01 Wine grape mitochondrion 34.35 42.35
VIT_14s0081g00270.t01 Wine grape plastid 39.8 40.34
VIT_14s0081g00120.t01 Wine grape plastid 38.95 39.28
VIT_14s0081g00110.t01 Wine grape cytosol 32.65 39.1
KRH70370 Soybean cytosol 35.2 38.05
CDY26589 Canola cytosol 4.42 37.68
CDY39810 Canola cytosol 24.49 36.83
CDY09968 Canola cytosol 18.37 36.73
CDY51169 Canola cytosol 26.36 36.64
CDY06217 Canola cytosol 18.2 36.52
VIT_14s0030g02280.t01 Wine grape plastid 34.69 36.36
CDY16110 Canola extracellular 25.34 36.34
Bra036649.1-P Field mustard cytosol 24.15 36.32
CDY03257 Canola cytosol 24.15 36.32
VIT_14s0081g00280.t01 Wine grape mitochondrion 39.29 36.15
Bra026882.1-P Field mustard cytosol 32.65 35.96
CDY34870 Canola mitochondrion 17.52 35.89
Bra027029.1-P Field mustard mitochondrion 14.8 35.8
Bra027636.1-P Field mustard cytosol 19.73 35.8
CDY33797 Canola mitochondrion 31.12 35.74
Bra031731.1-P Field mustard mitochondrion 30.78 35.63
KRH49698 Soybean cytosol 34.18 35.26
CDX71969 Canola cytosol 23.64 35.1
Bra006187.1-P Field mustard plastid 17.35 35.05
AT1G62720.1 Thale cress mitochondrion 28.74 34.85
CDY00489 Canola mitochondrion 34.69 34.81
AT3G22470.1 Thale cress cytosol, mitochondrion 36.56 34.73
Bra026884.1-P Field mustard cytosol 27.04 34.64
Bra026958.1-P Field mustard mitochondrion 37.41 34.54
AT5G16640.1 Thale cress mitochondrion 29.59 34.52
Bra026957.1-P Field mustard mitochondrion 35.37 34.49
KRH58843 Soybean nucleus 35.71 34.37
KRH38755 Soybean mitochondrion 34.69 34.34
CDY31272 Canola mitochondrion 33.16 34.33
Bra028267.1-P Field mustard mitochondrion 36.39 34.19
KRH75045 Soybean mitochondrion 34.69 34.17
AT1G12700.2 Thale cress cytosol 35.88 34.14
CDY26607 Canola cytosol 26.53 34.14
CDX67634 Canola cytosol 24.49 34.04
KRH09256 Soybean mitochondrion 32.31 33.99
KRH75063 Soybean mitochondrion, plastid 34.69 33.77
CDY16002 Canola cytosol 17.86 33.76
CDX69436 Canola plastid 28.4 33.53
CDY26593 Canola cytosol 34.69 33.5
AT1G12620.1 Thale cress cytosol, mitochondrion 35.37 33.49
Bra016762.1-P Field mustard mitochondrion 34.52 33.44
CDY68929 Canola mitochondrion 34.52 33.44
KRH75048 Soybean mitochondrion 34.52 33.39
KRH42744 Soybean mitochondrion 34.69 33.39
Bra026971.1-P Field mustard mitochondrion 35.71 33.39
CDY46909 Canola mitochondrion 16.5 33.22
Bra026954.1-P Field mustard mitochondrion 36.56 33.08
AT1G62670.1 Thale cress mitochondrion 35.37 33.02
CDY65983 Canola mitochondrion 23.64 32.94
CDY34969 Canola mitochondrion 28.23 32.81
AT1G63130.1 Thale cress mitochondrion 35.03 32.7
AT1G62910.1 Thale cress mitochondrion 35.03 32.59
AT1G62930.1 Thale cress plastid 34.86 32.59
CDY25492 Canola mitochondrion 27.21 32.59
AT1G63330.2 Thale cress cytosol 30.95 32.56
CDY26565 Canola mitochondrion 31.46 32.51
AT1G12300.1 Thale cress mitochondrion 35.2 32.5
CDY16031 Canola cytosol 17.18 32.48
AT1G64583.1 Thale cress mitochondrion 28.23 32.42
CDY08386 Canola cytosol 24.49 32.36
Bra021192.1-P Field mustard plastid 27.72 32.34
AT1G63080.3 Thale cress mitochondrion 33.67 32.25
AT1G06580.1 Thale cress mitochondrion 27.38 32.2
Bra026836.1-P Field mustard cytosol, mitochondrion 26.87 32.18
AT3G16710.1 Thale cress mitochondrion 27.72 32.15
Bra036651.1-P Field mustard mitochondrion 29.25 32.15
AT1G12775.1 Thale cress cytosol, mitochondrion 35.2 32.14
CDY26588 Canola extracellular 17.69 32.1
AT1G63070.1 Thale cress mitochondrion 32.14 32.03
AT1G63150.1 Thale cress mitochondrion 34.18 31.96
VIT_14s0030g02260.t01 Wine grape cytosol 23.98 31.83
CDY34688 Canola cytosol 19.56 31.77
AT1G62680.2 Thale cress plastid 29.59 31.75
CDY49646 Canola mitochondrion 27.04 31.74
CDY34375 Canola mitochondrion 27.89 31.72
Bra025516.1-P Field mustard cytosol, mitochondrion 25.68 31.66
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 29.42 31.51
CDY31271 Canola mitochondrion 26.02 31.48
CDY46394 Canola mitochondrion 25.68 31.39
CDY48949 Canola mitochondrion 25.68 31.39
AT1G63400.1 Thale cress cytosol, plastid 30.78 31.37
Bra027026.1-P Field mustard mitochondrion 27.89 31.36
CDY16033 Canola cytosol 7.99 31.33
AT1G62914.1 Thale cress mitochondrion 28.06 31.25
CDY46912 Canola mitochondrion 26.19 31.17
AT1G62590.1 Thale cress mitochondrion 33.5 31.07
CDY35831 Canola mitochondrion 27.04 30.87
AT1G64580.1 Thale cress mitochondrion 27.38 30.78
Bra027658.1-P Field mustard cytosol, mitochondrion 28.4 30.76
CDY33753 Canola mitochondrion 22.79 30.18
CDY66358 Canola mitochondrion 19.9 30.0
AT5G41170.1 Thale cress mitochondrion 26.87 29.98
CDY16032 Canola mitochondrion 20.58 29.66
CDY47835 Canola mitochondrion 21.6 29.06
CDY25519 Canola mitochondrion, plastid 31.46 28.95
Bra027726.1-P Field mustard mitochondrion 22.96 28.66
CDY16003 Canola cytosol, plastid 19.05 28.64
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 14.29 28.28
AT4G26800.2 Thale cress mitochondrion, plastid 24.66 28.21
CDY28348 Canola mitochondrion, plastid 28.4 27.93
CDY29251 Canola mitochondrion 23.81 27.61
CDX89301 Canola plastid 24.66 27.1
TraesCS1A01G067700.1 Wheat extracellular 15.48 27.0
Bra026401.1-P Field mustard plastid 24.49 26.92
TraesCS6B01G127200.1 Wheat cytosol 15.65 26.74
TraesCS2B01G126900.1 Wheat cytosol 17.35 26.7
HORVU1Hr1G018190.2 Barley cytosol 12.93 26.67
CDX68680 Canola mitochondrion 20.75 26.41
CDY25522 Canola mitochondrion, plastid 20.07 26.4
HORVU1Hr1G011250.1 Barley cytosol 13.1 26.1
Os08t0248400-01 Rice mitochondrion 19.39 25.91
Zm00001d018982_P001 Maize mitochondrion 15.31 25.71
TraesCS6D01G083300.1 Wheat mitochondrion 19.22 25.34
Os10t0501700-00 Rice cytosol 19.56 25.33
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 13.95 25.23
Os10t0497366-00 Rice mitochondrion 17.18 25.19
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 16.16 25.13
TraesCSU01G089800.1 Wheat mitochondrion 14.97 25.07
TraesCS1D01G058000.1 Wheat cytosol 17.18 24.88
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 20.41 24.79
Os10t0495100-01 Rice cytosol, mitochondrion 19.39 24.73
TraesCS6A01G015000.1 Wheat mitochondrion 17.35 24.58
CDY66357 Canola cytosol 15.82 24.54
HORVU6Hr1G017870.2 Barley mitochondrion 12.41 24.33
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 20.75 24.25
TraesCSU01G090200.1 Wheat cytosol 18.2 24.21
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 15.48 24.01
AT1G64100.2 Thale cress cytosol 32.82 23.95
TraesCS6D01G083100.1 Wheat cytosol 19.9 23.88
TraesCS6B01G127500.1 Wheat cytosol 19.73 23.67
TraesCS7D01G231400.1 Wheat cytosol, plastid 16.16 23.57
TraesCS6D01G083400.1 Wheat mitochondrion 19.73 23.53
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 17.18 23.33
TraesCSU01G089700.1 Wheat mitochondrion 19.05 23.24
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 19.9 23.17
TraesCS6D01G076500.1 Wheat plastid 17.69 22.96
TraesCS1D01G068600.1 Wheat plastid 13.27 22.94
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 19.9 22.9
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 18.71 22.87
TraesCS1B01G038200.1 Wheat mitochondrion 24.32 22.59
CDY34370 Canola cytosol 31.46 22.53
CDY15970 Canola cytosol 3.57 22.34
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 16.67 22.32
KXG34536 Sorghum mitochondrion 21.6 22.2
Os10t0499500-01 Rice mitochondrion 19.05 22.13
OQU82832 Sorghum cytosol 10.71 22.03
TraesCS1D01G058400.1 Wheat cytosol 19.22 21.94
TraesCS6D01G017800.1 Wheat cytosol 19.9 21.79
Os08t0107700-01 Rice cytosol, mitochondrion 13.78 21.66
TraesCS6B01G021600.1 Wheat mitochondrion 26.36 21.65
OQU88594 Sorghum cytosol 19.22 21.65
TraesCS1D01G057800.1 Wheat mitochondrion 13.27 21.49
HORVU6Hr1G014310.1 Barley mitochondrion 25.0 21.4
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 9.18 21.34
CDX81633 Canola extracellular, golgi, plasma membrane 32.99 21.34
TraesCS6A01G083000.1 Wheat cytosol 16.5 21.27
EER95949 Sorghum mitochondrion 23.81 21.12
TraesCS1B01G085400.1 Wheat cytosol 22.79 20.9
TraesCS6D01G290900.1 Wheat mitochondrion 26.02 20.87
TraesCS1B01G315500.1 Wheat mitochondrion 11.39 20.87
TraesCS7B01G469500.1 Wheat cytosol 19.9 20.82
TraesCS1B01G072700.1 Wheat cytosol 18.03 20.78
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 23.47 20.78
TraesCS1B01G038400.1 Wheat cytosol 21.26 20.56
Os08t0107800-01 Rice mitochondrion 21.77 20.51
TraesCS1B01G073200.1 Wheat cytosol 10.54 20.46
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 24.83 20.45
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 24.83 20.42
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 24.83 20.42
TraesCS6D01G047700.1 Wheat mitochondrion 23.98 20.41
HORVU0Hr1G035310.1 Barley cytosol 20.07 20.27
TraesCS1A01G054800.1 Wheat cytosol 20.07 20.27
TraesCS1B01G072300.1 Wheat plastid 19.56 20.25
TraesCS1D01G055300.1 Wheat cytosol 21.26 20.23
TraesCS6D01G017700.1 Wheat plastid 18.37 20.22
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 16.5 20.21
TraesCS1B01G073100.1 Wheat cytosol 20.75 20.13
TraesCS1B01G086000.1 Wheat plastid 23.47 20.12
TraesCS1B01G092600.1 Wheat plastid 17.69 20.12
Bra027656.1-P Field mustard cytosol 32.14 20.09
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 24.32 20.0
Os10t0495200-01 Rice mitochondrion 26.53 19.95
EES07882 Sorghum cytosol 26.36 19.95
TraesCS1D01G056700.1 Wheat cytosol 20.58 19.93
KXG35774 Sorghum cytosol, mitochondrion 15.99 19.87
TraesCS1A01G031700.1 Wheat plastid 25.0 19.84
TraesCS1D01G068900.1 Wheat mitochondrion 27.38 19.8
TraesCS1B01G085900.1 Wheat mitochondrion 27.21 19.66
Os10t0497300-01 Rice mitochondrion 26.53 19.65
Zm00001d009733_P001 Maize cytosol 26.53 19.62
TraesCS1A01G031600.1 Wheat cytosol 21.94 19.49
OQU82823 Sorghum cytosol 26.36 19.45
OQU82827 Sorghum cytosol 26.36 19.45
Zm00001d007534_P001 Maize plastid 25.68 19.43
KXG27690 Sorghum cytosol, plastid 24.15 19.43
TraesCS1B01G039700.1 Wheat cytosol 20.07 19.41
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 22.96 19.37
TraesCS1A01G067600.1 Wheat mitochondrion 26.7 19.31
TraesCS1A01G067000.1 Wheat mitochondrion 23.47 19.27
TraesCS1A01G067400.1 Wheat mitochondrion 27.04 19.27
TraesCS1B01G038500.1 Wheat mitochondrion 25.85 19.24
TraesCS1A01G073800.1 Wheat mitochondrion 10.88 19.22
EES09203 Sorghum cytosol 26.02 19.17
TraesCS2A01G531000.1 Wheat golgi 21.94 19.0
TraesCS1B01G072400.1 Wheat cytosol 22.45 18.99
TraesCS1D01G068500.1 Wheat mitochondrion 26.19 18.97
TraesCS1D01G068400.1 Wheat mitochondrion 26.53 18.95
TraesCS1B01G085300.1 Wheat mitochondrion 25.51 18.94
OQU82831 Sorghum cytosol 19.73 18.92
OQU82856 Sorghum cytosol 24.15 18.88
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.34 18.81
Os10t0497432-01 Rice mitochondrion 8.5 18.8
TraesCS1B01G039100.1 Wheat mitochondrion 25.0 18.77
TraesCS1B01G071600.1 Wheat mitochondrion 27.04 18.75
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 21.43 18.72
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 26.36 18.67
TraesCS1D01G056200.1 Wheat mitochondrion 26.19 18.67
TraesCS1D01G069100.1 Wheat mitochondrion 20.41 18.66
TraesCS6A01G311600.1 Wheat mitochondrion 26.53 18.66
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 20.24 18.62
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 22.11 18.6
TraesCS1B01G075300.1 Wheat cytosol 18.88 18.59
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 24.66 18.59
TraesCS1A01G057300.1 Wheat cytosol 22.62 18.52
TraesCS2D01G533000.1 Wheat cytosol, extracellular 20.75 18.51
OQU82836 Sorghum cytosol 19.22 18.46
HORVU6Hr1G076780.7 Barley mitochondrion 25.85 18.45
OQU80148 Sorghum mitochondrion 22.79 18.43
Zm00001d007531_P001 Maize plastid 25.51 18.43
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 10.71 18.42
TraesCS2D01G532500.1 Wheat plastid 21.26 18.38
Bra016758.1-P Field mustard plastid 36.22 18.38
Os04t0349600-01 Rice plastid 12.07 18.35
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 24.49 18.3
TraesCS2B01G560300.1 Wheat cytosol 17.69 18.28
TraesCS2B01G559900.1 Wheat cytosol 16.84 18.27
TraesCS2A01G526200.1 Wheat golgi 21.09 18.21
Zm00001d007548_P001 Maize plastid 25.17 18.18
Zm00001d007555_P001 Maize plastid 25.17 18.18
TraesCS1D01G068800.1 Wheat plastid 25.17 18.14
Zm00001d007559_P001 Maize plastid 25.17 18.12
TraesCS1B01G039200.1 Wheat mitochondrion 24.15 18.11
TraesCS1A01G054700.2 Wheat mitochondrion 25.0 18.1
KXG28799 Sorghum plastid 23.3 18.03
HORVU0Hr1G031920.1 Barley plastid 26.36 18.02
TraesCS1D01G076500.1 Wheat mitochondrion 20.24 17.92
HORVU1Hr1G010970.1 Barley mitochondrion 25.0 17.8
KXG19780 Sorghum cytosol 17.86 17.77
TraesCS1B01G072900.2 Wheat mitochondrion 26.36 17.75
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 23.13 17.75
TraesCS2A01G531100.1 Wheat cytosol 17.18 17.75
TraesCS2D01G532300.1 Wheat plastid 23.47 17.74
TraesCS6B01G114300.1 Wheat cytosol 11.73 17.74
HORVU6Hr1G002890.6 Barley cytosol, plastid 23.98 17.74
TraesCS6A01G014600.1 Wheat cytosol 11.9 17.72
TraesCS2D01G532400.1 Wheat cytosol 18.37 17.68
TraesCS1A01G054500.1 Wheat mitochondrion 23.3 17.56
HORVU1Hr1G004750.6 Barley plastid 23.81 17.54
TraesCS2D01G532100.1 Wheat mitochondrion 20.58 17.49
HORVU1Hr1G014040.1 Barley mitochondrion 24.49 17.29
TraesCS1A01G055800.1 Wheat mitochondrion 22.62 17.25
TraesCS2B01G560700.1 Wheat plastid 22.45 17.12
HORVU1Hr1G013810.1 Barley plastid 24.32 17.04
TraesCS1B01G084800.1 Wheat cytosol 13.44 17.03
HORVU1Hr1G011150.1 Barley cytosol, plastid 25.51 16.99
HORVU1Hr1G010890.5 Barley cytosol 25.85 16.93
CDY31277 Canola plastid 27.55 16.89
HORVU1Hr1G011160.2 Barley cytosol, plastid 25.68 16.87
TraesCS2D01G532600.1 Wheat plastid 22.11 16.75
HORVU1Hr1G014060.1 Barley plastid 25.34 16.74
HORVU1Hr1G011300.3 Barley plastid 26.19 16.74
TraesCS2A01G530600.1 Wheat cytosol 21.77 16.73
TraesCS1B01G092500.1 Wheat mitochondrion 22.28 16.73
TraesCS1A01G073700.1 Wheat cytosol 10.88 16.62
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 20.24 16.6
Os08t0110200-01 Rice mitochondrion 22.11 16.29
TraesCS1D01G076900.1 Wheat plastid 18.03 16.13
TraesCS1D01G056600.1 Wheat mitochondrion 5.44 15.84
Zm00001d009735_P001 Maize cytosol 25.85 15.62
TraesCS1A01G073600.1 Wheat mitochondrion 10.37 15.56
Os04t0351333-00 Rice cytosol 22.96 15.36
TraesCS1D01G068700.1 Wheat cytosol 11.39 15.26
HORVU1Hr1G011400.44 Barley plastid 15.48 14.77
OQU82834 Sorghum cytosol 24.15 14.75
TraesCS1D01G076700.1 Wheat cytosol 8.33 14.67
TraesCS6B01G341800.2 Wheat cytosol 9.86 14.54
TraesCS1A01G055500.1 Wheat mitochondrion 5.27 14.29
TraesCS1A01G066600.1 Wheat mitochondrion 6.29 14.07
OQU82833 Sorghum cytosol 10.71 14.06
TraesCS1D01G058500.1 Wheat plastid 13.61 14.04
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.8 13.89
TraesCS1A01G074000.1 Wheat mitochondrion 6.63 13.78
TraesCS1A01G056000.1 Wheat cytosol 9.35 13.68
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 5.27 13.6
TraesCS1D01G076400.1 Wheat cytosol 8.16 13.22
TraesCS1D01G067600.1 Wheat cytosol 7.99 12.88
TraesCS1D01G033000.1 Wheat cytosol 8.84 12.87
CDY34680 Canola cytosol 19.56 12.61
TraesCS1A01G067800.1 Wheat cytosol 7.99 12.57
TraesCS1B01G038600.1 Wheat cytosol 7.65 12.4
TraesCS1B01G038300.1 Wheat plastid 11.05 11.9
TraesCS1A01G055600.1 Wheat cytosol 6.12 11.08
OQU88581 Sorghum cytosol 20.07 10.86
TraesCS1D01G057700.1 Wheat cytosol 5.78 10.46
TraesCS2D01G532200.1 Wheat cytosol 4.76 9.56
CDY21063 Canola plastid 2.38 2.55
Protein Annotations
EnsemblPlants:PGSC0003DMT400056663EnsemblPlantsGene:PGSC0003DMG400022035Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF3
PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400022035SEG:segSUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI0002953BEBUniProt:M1BZR5MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400022035]
Coordinates
chr6:+:2374989..2377127
Molecular Weight (calculated)
66884.2 Da
IEP (calculated)
7.999
GRAVY (calculated)
-0.038
Length
588 amino acids
Sequence
(BLAST)
001: MAMSRICLRK CNGILSISSF HISYSDFSSR GSKVKGRVGL NSSSSFECLD DAVNLFHQMV RMKPLPSLVD FSKLFSNMIS RKHYSAVLSL FREMLTMGIP
101: VDEFILNIVI NSYCLMHRAD FGFSVLSIYL KNGIPFNNVT FNTLLRGIFA ENKVKDAVEL FKKLVREKIC VPDEIMYATV MNGLSKRGHT QKTLSLLRLM
201: EQGNTQPGIY IFNIVIDALC KDGNLDAAIN ILNEMKQKGI HPDILTYNSM IDGLCKLGQW EKVKTLFSEM VNLNMYPDVR TFTILTDGLC KEGKVEHAEE
301: VMELMVEKGV EPNVITYNVI MDGYCLRGQL DRARRIFDIL IDKGIEPDNV SYSILINGYC KKKKLSKAMQ VFREISKKGS KPTICTYNTI LQGLFESGRI
401: GDAKTIYEEM LSAGPAPDLY IYCTLLDGYF KYGLVEEAMS LFNKLERKTE NIDIIFYNII INGLCKNGEL DKAHAIFQKL SSMGLLLDWR IYTTMITGFC
501: LQGLLDEAKD MLRKMEENGC FPNNVTYNVI VRGYLRCRKI NEMVTFMKEM TGRGFSFDAT TAELLVKEIS ENPSILDMIP ELHTENRK
Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)
001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.