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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
iPSORT:secretory
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16003 Canola cytosol, plastid 54.31 79.03
CDY33753 Canola mitochondrion 57.12 73.2
CDY33797 Canola mitochondrion 64.85 72.07
CDY00489 Canola mitochondrion 73.64 71.5
CDY16110 Canola extracellular 51.14 70.98
CDY26589 Canola cytosol 8.26 68.12
CDY35831 Canola mitochondrion 60.28 66.6
CDY31271 Canola mitochondrion 55.89 65.43
CDY51169 Canola cytosol 48.51 65.25
CDY16032 Canola mitochondrion 46.75 65.2
CDY26588 Canola extracellular 36.56 64.2
CDY26607 Canola cytosol 50.62 63.02
CDY26593 Canola cytosol 67.14 62.73
AT1G12300.1 Thale cress mitochondrion 69.95 62.48
CDY31272 Canola mitochondrion 62.21 62.32
AT1G12620.1 Thale cress cytosol, mitochondrion 67.66 62.0
CDY68929 Canola mitochondrion 66.08 61.94
CDY34870 Canola mitochondrion 31.11 61.67
CDY16031 Canola cytosol 33.57 61.41
AT3G22470.1 Thale cress cytosol, mitochondrion 66.26 60.9
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 58.52 60.66
CDX71969 Canola cytosol 41.3 59.34
CDY16002 Canola cytosol 32.34 59.16
AT1G12775.1 Thale cress cytosol, mitochondrion 65.2 57.61
CDY16033 Canola cytosol 14.59 55.33
CDY15970 Canola cytosol 8.44 51.06
CDY34375 Canola mitochondrion 43.94 48.36
CDY34688 Canola cytosol 30.76 48.34
CDY39810 Canola cytosol 32.34 47.06
CDY03257 Canola cytosol 32.16 46.8
CDX81633 Canola extracellular, golgi, plasma membrane 72.94 45.65
CDY09968 Canola cytosol 23.2 44.9
CDY06217 Canola cytosol 23.02 44.71
CDX67634 Canola cytosol 32.86 44.21
CDY25492 Canola mitochondrion 37.08 42.97
CDY08386 Canola cytosol 33.57 42.92
CDY47835 Canola mitochondrion 32.34 42.11
CDY65983 Canola mitochondrion 31.11 41.94
CDY25522 Canola mitochondrion, plastid 32.86 41.83
CDY48949 Canola mitochondrion 35.15 41.58
CDY46394 Canola mitochondrion 35.15 41.58
VIT_12s0028g02320.t01 Wine grape mitochondrion 34.62 41.3
CDX69436 Canola plastid 36.03 41.16
CDY46909 Canola mitochondrion 21.09 41.1
CDY46912 Canola mitochondrion 35.68 41.09
CDY49646 Canola mitochondrion 35.5 40.32
CDY66358 Canola mitochondrion 27.42 40.0
CDX68679 Canola cytosol 7.91 39.13
CDY34969 Canola mitochondrion 34.8 39.13
Solyc06g007280.2.1 Tomato cytosol 17.22 38.43
VIT_14s0081g00270.t01 Wine grape plastid 38.84 38.1
CDY25519 Canola mitochondrion, plastid 42.35 37.72
VIT_14s0081g00120.t01 Wine grape plastid 37.08 36.19
CDY29251 Canola mitochondrion 32.16 36.09
VIT_14s0081g00110.t01 Wine grape cytosol 30.76 35.64
KRH42744 Soybean mitochondrion 37.96 35.35
KRH58843 Soybean nucleus 37.61 35.02
PGSC0003DMT400052977 Potato cytosol 23.9 34.96
CDY28348 Canola mitochondrion, plastid 36.73 34.95
CDX89301 Canola plastid 32.51 34.58
KRH70370 Soybean cytosol 32.86 34.38
PGSC0003DMT400008757 Potato cytosol 30.05 34.34
KRH49698 Soybean cytosol 34.09 34.04
PGSC0003DMT400025074 Potato cytosol 32.69 33.7
Solyc06g007300.1.1 Tomato extracellular 34.97 33.61
PGSC0003DMT400025087 Potato endoplasmic reticulum 29.17 33.54
CDX68680 Canola mitochondrion 27.07 33.33
PGSC0003DMT400008760 Potato mitochondrion 34.27 33.28
Solyc06g005220.2.1 Tomato cytosol 23.73 33.25
PGSC0003DMT400008759 Potato cytosol 18.45 32.92
KRH75045 Soybean mitochondrion 34.45 32.83
PGSC0003DMT400052971 Potato mitochondrion 34.09 32.72
Solyc06g007740.1.1 Tomato cytosol 33.92 32.71
VIT_14s0081g00280.t01 Wine grape mitochondrion 36.73 32.71
KRH75063 Soybean mitochondrion, plastid 34.62 32.62
PGSC0003DMT400056665 Potato mitochondrion 33.74 32.6
KRH75048 Soybean mitochondrion 34.8 32.57
Solyc06g007810.1.1 Tomato cytosol 15.29 32.46
KRH09256 Soybean mitochondrion 31.81 32.38
PGSC0003DMT400025067 Potato cytosol 27.07 32.35
VIT_14s0030g02280.t01 Wine grape plastid 31.81 32.26
KRH38755 Soybean mitochondrion 33.57 32.15
PGSC0003DMT400053185 Potato mitochondrion 33.22 32.03
PGSC0003DMT400056663 Potato plastid 32.51 31.46
PGSC0003DMT400053556 Potato mitochondrion 24.25 30.07
PGSC0003DMT400053182 Potato cytosol 31.46 29.88
CDY31277 Canola plastid 50.09 29.72
CDY66357 Canola cytosol 19.33 29.02
PGSC0003DMT400015298 Potato mitochondrion 30.58 28.52
PGSC0003DMT400015293 Potato mitochondrion 30.58 28.52
CDY34370 Canola cytosol 41.12 28.5
Solyc04g080120.1.1 Tomato extracellular 30.23 28.1
VIT_14s0030g02260.t01 Wine grape cytosol 21.62 27.77
CDY34680 Canola cytosol 26.01 16.23
CDY21063 Canola plastid 3.87 4.01
Protein Annotations
EnsemblPlants:CDY26565EnsemblPlantsGene:GSBRNA2T00035431001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF3
PFAM:PF12854PFAM:PF13041PFAM:PF13812PFscan:PS51375ProteinID:CDY26565ProteinID:CDY26565.1
TIGRFAMs:TIGR00756UniParc:UPI0004EE8C96UniProt:A0A078GJA0MapMan:35.1::
Description
BnaA09g47120DBnaA09g47120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJA0]
Coordinates
chrLK032192:+:170573..172772
Molecular Weight (calculated)
63136.2 Da
IEP (calculated)
8.300
GRAVY (calculated)
0.158
Length
569 amino acids
Sequence
(BLAST)
001: MLCRRLVLVS RIPLSPVGTL ATPLLSFIRS SCERGYSGLG SDRNLSSYKE RLRSGLVDIK KKDAVALFQS MIRSRPLPTV MDFNKLFSAV ARTKQYDLVL
101: DLCKQMELQG IAHSIYTLSI MINCFCRLQK LGFAFSVMGK MLKLGYEPDT ITFSTLINGL CLVGRVSKAV ELVDHMVDMK VIPNLIILNT IVNGLCLQDR
201: LSEAMSLIHR MLANGCQPDA VTYGPMELRK IKPQVVTYNI IIDSLCKDGS LEDALCLFNE METKGIKANV ITYTSLIGGF CSAGRWDDGA QLLRDMITRG
301: VTPNVVTFNA LIDSFVKEGQ LTEAKKLYNE MITRGTDPNI ITYNSLIYGM CMDNCLDEAN QMLDMMVSKG FYPDIVTFNI LINGYCKAKQ VDEGTRLFRN
401: MCLRGVVADT VTYNTLIQGF CQSGKLNVAK ELFQEMVFVG VPPSVVTYSI LLDGKIDDAW DLFCSLPLKG VKPEVRTYNI MIGGLCKKGS LPEAVLLFRK
501: MGEAGVAPSS GTYNTLIRAH LRGGDLTKSA ELIEEMKRCG FSADASTIKI VMDMLLDGRM KKSFLDMLS
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.