Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16033 Canola cytosol 48.7 37.33
CDY26589 Canola cytosol 18.26 30.43
CDY15970 Canola cytosol 17.39 21.28
CDX71969 Canola cytosol 47.83 13.89
CDY51169 Canola cytosol 49.57 13.48
CDY09968 Canola cytosol 28.7 11.22
CDY26607 Canola cytosol 44.35 11.16
CDY16110 Canola extracellular 39.13 10.98
CDY06217 Canola cytosol 27.83 10.92
CDY33753 Canola mitochondrion 41.74 10.81
TraesCS2D01G532200.1 Wheat cytosol 26.09 10.24
CDY34688 Canola cytosol 32.17 10.22
CDY31272 Canola mitochondrion 48.7 9.86
CDY34375 Canola mitochondrion 41.74 9.28
TraesCS1B01G038600.1 Wheat cytosol 28.7 9.09
CDY68929 Canola mitochondrion 44.35 8.4
TraesCS1D01G076700.1 Wheat cytosol 24.35 8.38
CDY26593 Canola cytosol 44.35 8.37
CDY08386 Canola cytosol 32.17 8.31
TraesCS1A01G055600.1 Wheat cytosol 23.48 8.31
TraesCS1D01G057700.1 Wheat cytosol 23.48 8.31
CDY25522 Canola mitochondrion, plastid 32.17 8.28
CDY00489 Canola mitochondrion 41.74 8.19
CDY33797 Canola mitochondrion 35.65 8.01
CDY66357 Canola cytosol 26.09 7.92
CDY26565 Canola mitochondrion 39.13 7.91
CDY35831 Canola mitochondrion 34.78 7.77
TraesCS1D01G067600.1 Wheat cytosol 24.35 7.67
TraesCS1B01G073200.1 Wheat cytosol 20.0 7.59
TraesCS1A01G056000.1 Wheat cytosol 26.09 7.46
CDY65983 Canola mitochondrion 26.96 7.35
TraesCS6B01G341800.2 Wheat cytosol 25.22 7.27
TraesCS1A01G067800.1 Wheat cytosol 23.48 7.22
CDY03257 Canola cytosol 24.35 7.16
CDY39810 Canola cytosol 24.35 7.16
KRH09082 Soybean cytosol 25.22 7.11
TraesCS1D01G068700.1 Wheat cytosol 26.96 7.06
Os10t0501700-00 Rice cytosol 27.83 7.05
TraesCS6B01G114300.1 Wheat cytosol 23.48 6.94
CDY46912 Canola mitochondrion 29.57 6.88
CDX67634 Canola cytosol 25.22 6.86
TraesCS6A01G014600.1 Wheat cytosol 23.48 6.84
KXG35774 Sorghum cytosol, mitochondrion 27.83 6.77
TraesCS1A01G073700.1 Wheat cytosol 22.61 6.75
TraesCS1D01G033000.1 Wheat cytosol 23.48 6.68
CDY49646 Canola mitochondrion 27.83 6.39
CDY25492 Canola mitochondrion 26.96 6.31
OQU82833 Sorghum cytosol 24.35 6.25
KRH48615 Soybean mitochondrion 29.57 6.24
CDX69436 Canola plastid 26.96 6.22
CDY31277 Canola plastid 51.3 6.15
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 26.96 6.14
CDY34969 Canola mitochondrion 26.96 6.13
TraesCS1B01G038300.1 Wheat plastid 28.7 6.04
CDY46394 Canola mitochondrion 25.22 6.03
CDY48949 Canola mitochondrion 25.22 6.03
KRH08636 Soybean cytosol 26.96 5.94
KRH09154 Soybean mitochondrion 28.7 5.94
TraesCS6A01G083000.1 Wheat cytosol 23.48 5.92
KRH09084 Soybean plastid 26.09 5.87
TraesCS1B01G084800.1 Wheat cytosol 23.48 5.82
KRH31646 Soybean cytosol 26.09 5.79
HORVU0Hr1G035310.1 Barley cytosol 28.7 5.67
KRH39072 Soybean cytosol 24.35 5.65
KRH39004 Soybean cytosol 24.35 5.63
KRH39057 Soybean cytosol 24.35 5.63
KRH39074 Soybean cytosol 24.35 5.63
KRH39112 Soybean cytosol 24.35 5.63
TraesCS1D01G058400.1 Wheat cytosol 25.22 5.63
TraesCS1B01G038400.1 Wheat cytosol 29.57 5.59
CDY28348 Canola mitochondrion, plastid 28.7 5.52
TraesCS2B01G560300.1 Wheat cytosol 26.96 5.45
KRH08628 Soybean plastid 26.09 5.43
KRH39054 Soybean cytosol 23.48 5.43
TraesCS6D01G017700.1 Wheat plastid 25.22 5.43
KRH08671 Soybean cytosol, mitochondrion 26.09 5.42
CDX89301 Canola plastid 25.22 5.42
KRH25652 Soybean cytosol, golgi 25.22 5.37
KRH08607 Soybean cytosol 26.09 5.35
TraesCS1D01G055300.1 Wheat cytosol 28.7 5.34
CDY29251 Canola mitochondrion 23.48 5.33
KRH09121 Soybean mitochondrion 24.35 5.24
TraesCS7B01G469500.1 Wheat cytosol 25.22 5.16
KXG19780 Sorghum cytosol 26.09 5.08
CDX81633 Canola extracellular, golgi, plasma membrane 40.0 5.06
KRH39066 Soybean cytosol 24.35 5.05
CDY47835 Canola mitochondrion 19.13 5.03
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 27.83 5.01
KRH17148 Soybean mitochondrion 23.48 4.95
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 22.61 4.95
TraesCS1B01G073100.1 Wheat cytosol 26.09 4.95
KRH08277 Soybean plastid 24.35 4.94
TraesCS1B01G039700.1 Wheat cytosol 26.09 4.93
KRH08625 Soybean plastid 24.35 4.86
TraesCS6D01G017800.1 Wheat cytosol 22.61 4.84
TraesCS1A01G031600.1 Wheat cytosol 27.83 4.83
KRH09095 Soybean plastid 24.35 4.79
KRH08639 Soybean mitochondrion, plastid 23.48 4.78
TraesCS1D01G056700.1 Wheat cytosol 25.22 4.78
TraesCS1B01G038200.1 Wheat mitochondrion 26.09 4.74
TraesCS1D01G058500.1 Wheat plastid 23.48 4.74
TraesCS2D01G532500.1 Wheat plastid 27.83 4.71
TraesCS2D01G533000.1 Wheat cytosol, extracellular 26.96 4.7
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 20.87 4.7
TraesCS1B01G085400.1 Wheat cytosol 26.09 4.68
KRH40400 Soybean plastid 23.48 4.68
OQU82836 Sorghum cytosol 24.35 4.58
TraesCS2A01G531100.1 Wheat cytosol 22.61 4.57
OQU82831 Sorghum cytosol 24.35 4.57
TraesCS2A01G526200.1 Wheat golgi 26.96 4.55
HORVU1Hr1G011400.44 Barley plastid 24.35 4.55
CDY25519 Canola mitochondrion, plastid 25.22 4.54
CDY16031 Canola cytosol 12.17 4.5
TraesCS2D01G532100.1 Wheat mitochondrion 26.96 4.48
KRH09097 Soybean plastid 22.61 4.46
TraesCS2B01G559900.1 Wheat cytosol 20.87 4.43
TraesCS2A01G531000.1 Wheat golgi 26.09 4.42
TraesCS1D01G076500.1 Wheat mitochondrion 25.22 4.37
TraesCS1B01G075300.1 Wheat cytosol 22.61 4.36
KRH08599 Soybean cytosol, plastid 25.22 4.33
KRH41817 Soybean mitochondrion 20.87 4.32
TraesCS1B01G072400.1 Wheat cytosol 26.09 4.32
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 25.22 4.31
CDY34680 Canola cytosol 33.91 4.28
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 26.09 4.2
TraesCS1A01G067000.1 Wheat mitochondrion 26.09 4.19
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 20.0 4.19
TraesCS1A01G031700.1 Wheat plastid 26.96 4.18
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 25.22 4.15
KRH39050 Soybean mitochondrion 19.13 4.14
TraesCS1A01G054800.1 Wheat cytosol 20.87 4.12
TraesCS2D01G532300.1 Wheat plastid 27.83 4.11
KXG27690 Sorghum cytosol, plastid 26.09 4.1
Os10t0495200-01 Rice mitochondrion 27.83 4.09
TraesCS1B01G039100.1 Wheat mitochondrion 27.83 4.09
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 25.22 4.06
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 25.22 4.06
TraesCS2A01G530600.1 Wheat cytosol 26.96 4.05
TraesCS6D01G047700.1 Wheat mitochondrion 24.35 4.05
TraesCS1A01G057300.1 Wheat cytosol 25.22 4.04
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 24.35 4.02
CDY26588 Canola extracellular 11.3 4.01
TraesCS2D01G532600.1 Wheat plastid 26.96 3.99
Zm00001d007534_P001 Maize plastid 26.96 3.99
OQU80148 Sorghum mitochondrion 25.22 3.99
TraesCS1B01G039200.1 Wheat mitochondrion 26.96 3.95
Os10t0499500-01 Rice mitochondrion 17.39 3.95
TraesCS1B01G038500.1 Wheat mitochondrion 26.96 3.92
TraesCS1B01G085300.1 Wheat mitochondrion 26.96 3.91
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 26.96 3.91
TraesCS6B01G021600.1 Wheat mitochondrion 24.35 3.91
TraesCS1A01G055800.1 Wheat mitochondrion 26.09 3.89
TraesCS1D01G069100.1 Wheat mitochondrion 21.74 3.89
TraesCS1D01G056200.1 Wheat mitochondrion 27.83 3.88
HORVU1Hr1G010970.1 Barley mitochondrion 27.83 3.87
TraesCS1A01G054500.1 Wheat mitochondrion 26.09 3.85
HORVU0Hr1G031920.1 Barley plastid 28.7 3.84
TraesCS1B01G092500.1 Wheat mitochondrion 26.09 3.83
TraesCS1D01G068900.1 Wheat mitochondrion 26.96 3.81
Zm00001d007531_P001 Maize plastid 26.96 3.81
Os10t0497300-01 Rice mitochondrion 26.09 3.78
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 23.48 3.78
TraesCS1B01G071600.1 Wheat mitochondrion 27.83 3.77
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 21.74 3.77
EES07882 Sorghum cytosol 25.22 3.73
TraesCS1B01G072700.1 Wheat cytosol 16.52 3.73
HORVU1Hr1G011300.3 Barley plastid 29.57 3.7
TraesCS1A01G054700.2 Wheat mitochondrion 26.09 3.69
TraesCS1D01G068500.1 Wheat mitochondrion 26.09 3.69
KRH09085 Soybean mitochondrion 22.61 3.69
TraesCS1A01G067600.1 Wheat mitochondrion 26.09 3.69
HORVU1Hr1G011160.2 Barley cytosol, plastid 28.7 3.69
Zm00001d007555_P001 Maize plastid 26.09 3.69
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.22 3.68
TraesCS6D01G290900.1 Wheat mitochondrion 23.48 3.68
HORVU1Hr1G010890.5 Barley cytosol 28.7 3.67
CDY34370 Canola cytosol 26.09 3.65
HORVU6Hr1G076780.7 Barley mitochondrion 26.09 3.64
HORVU1Hr1G004750.6 Barley plastid 25.22 3.63
HORVU1Hr1G011150.1 Barley cytosol, plastid 27.83 3.62
TraesCS6A01G311600.1 Wheat mitochondrion 26.09 3.59
Zm00001d007548_P001 Maize plastid 25.22 3.56
TraesCS1D01G068800.1 Wheat plastid 25.22 3.55
TraesCS1B01G072900.2 Wheat mitochondrion 26.96 3.55
Zm00001d007559_P001 Maize plastid 25.22 3.55
EES09203 Sorghum cytosol 24.35 3.51
TraesCS2B01G560700.1 Wheat plastid 23.48 3.5
HORVU6Hr1G014310.1 Barley mitochondrion 20.87 3.49
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 21.74 3.49
HORVU1Hr1G014040.1 Barley mitochondrion 25.22 3.48
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 23.48 3.46
OQU82856 Sorghum cytosol 22.61 3.46
CDY46909 Canola mitochondrion 8.7 3.42
OQU82823 Sorghum cytosol 23.48 3.39
OQU82827 Sorghum cytosol 23.48 3.39
Os08t0110200-01 Rice mitochondrion 23.48 3.38
Os08t0107800-01 Rice mitochondrion 18.26 3.37
TraesCS1B01G086000.1 Wheat plastid 20.0 3.35
TraesCS1B01G085900.1 Wheat mitochondrion 23.48 3.32
KRH12873 Soybean cytosol 20.0 3.3
TraesCS1D01G068400.1 Wheat mitochondrion 23.48 3.28
TraesCS1A01G067400.1 Wheat mitochondrion 23.48 3.27
CDY16002 Canola cytosol 8.7 3.22
KXG34536 Sorghum mitochondrion 15.65 3.15
HORVU6Hr1G002890.6 Barley cytosol, plastid 21.74 3.14
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 22.61 3.13
HORVU1Hr1G013810.1 Barley plastid 22.61 3.1
HORVU1Hr1G014060.1 Barley plastid 23.48 3.03
KXG28799 Sorghum plastid 20.0 3.03
Zm00001d009733_P001 Maize cytosol 20.87 3.02
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 20.0 3.0
OQU82834 Sorghum cytosol 24.35 2.91
TraesCS2B01G126900.1 Wheat cytosol 9.57 2.88
KRH39064 Soybean cytosol 23.48 2.79
EER95949 Sorghum mitochondrion 15.65 2.71
Zm00001d009735_P001 Maize cytosol 21.74 2.57
Os04t0351333-00 Rice cytosol 19.13 2.5
CDY31271 Canola mitochondrion 10.43 2.47
TraesCS2D01G532400.1 Wheat cytosol 13.04 2.45
CDX68680 Canola mitochondrion 9.57 2.38
OQU88594 Sorghum cytosol 10.43 2.3
TraesCS1D01G076900.1 Wheat plastid 12.17 2.13
CDY66358 Canola mitochondrion 6.96 2.05
OQU88581 Sorghum cytosol 16.52 1.75
TraesCS1A01G073600.1 Wheat mitochondrion 5.22 1.53
KRH40513 Soybean plastid 4.35 1.42
CDY34870 Canola mitochondrion 3.48 1.39
CDY16032 Canola mitochondrion 4.35 1.23
TraesCS1D01G076400.1 Wheat cytosol 2.61 0.83
TraesCS1D01G058000.1 Wheat cytosol 1.74 0.49
TraesCS1A01G055500.1 Wheat mitochondrion 0.87 0.46
HORVU1Hr1G011250.1 Barley cytosol 0.87 0.34
TraesCS6B01G127200.1 Wheat cytosol 0.87 0.29
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 0.87 0.26
CDY16003 Canola cytosol, plastid 0.87 0.26
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 0.87 0.23
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 0.87 0.23
TraesCS6D01G083300.1 Wheat mitochondrion 0.87 0.22
TraesCS6D01G076500.1 Wheat plastid 0.87 0.22
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 0.87 0.21
TraesCSU01G089700.1 Wheat mitochondrion 0.87 0.21
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 0.87 0.21
TraesCS6B01G127500.1 Wheat cytosol 0.87 0.2
TraesCS6D01G083100.1 Wheat cytosol 0.87 0.2
TraesCS6D01G083400.1 Wheat mitochondrion 0.87 0.2
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 0.87 0.2
TraesCS1B01G092600.1 Wheat plastid 0.87 0.19
CDY21063 Canola plastid 0.0 0.0
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 0.0 0.0
HORVU1Hr1G018190.2 Barley cytosol 0.0 0.0
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 0.0 0.0
HORVU6Hr1G017870.2 Barley mitochondrion 0.0 0.0
OQU82832 Sorghum cytosol 0.0 0.0
Os04t0349600-01 Rice plastid 0.0 0.0
Os08t0107700-01 Rice cytosol, mitochondrion 0.0 0.0
Os08t0248400-01 Rice mitochondrion 0.0 0.0
Os10t0495100-01 Rice cytosol, mitochondrion 0.0 0.0
Os10t0497366-00 Rice mitochondrion 0.0 0.0
Os10t0497432-01 Rice mitochondrion 0.0 0.0
TraesCS1A01G066600.1 Wheat mitochondrion 0.0 0.0
TraesCS1A01G067700.1 Wheat extracellular 0.0 0.0
TraesCS1A01G073800.1 Wheat mitochondrion 0.0 0.0
TraesCS1A01G074000.1 Wheat mitochondrion 0.0 0.0
TraesCS1B01G072300.1 Wheat plastid 0.0 0.0
TraesCS1B01G315500.1 Wheat mitochondrion 0.0 0.0
TraesCS1D01G056600.1 Wheat mitochondrion 0.0 0.0
TraesCS1D01G057800.1 Wheat mitochondrion 0.0 0.0
TraesCS1D01G068600.1 Wheat plastid 0.0 0.0
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 0.0 0.0
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 0.0 0.0
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 0.0 0.0
TraesCS6A01G015000.1 Wheat mitochondrion 0.0 0.0
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 0.0 0.0
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 0.0 0.0
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 0.0 0.0
TraesCS6B01G129100.1 Wheat cytosol, plastid 0.0 0.0
TraesCS7D01G231400.1 Wheat cytosol, plastid 0.0 0.0
TraesCSU01G089800.1 Wheat mitochondrion 0.0 0.0
TraesCSU01G090200.1 Wheat cytosol 0.0 0.0
Zm00001d018982_P001 Maize mitochondrion 0.0 0.0
Protein Annotations
EnsemblPlants:CDX68679EnsemblPlantsGene:GSBRNA2T00130356001Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF1649
PFAM:PF01535PFAM:PF13041PFscan:PS51375ProteinID:CDX68679ProteinID:CDX68679.1TIGRFAMs:TIGR00756
UniParc:UPI0004EE6205MapMan:35.1::::
Description
BnaC01g07740D
Coordinates
chrLK031789:-:738934..739281
Molecular Weight (calculated)
12817.9 Da
IEP (calculated)
9.704
GRAVY (calculated)
-0.155
Length
115 amino acids
Sequence
(BLAST)
001: MVFGIGIYNI IMKGMCNSDK VDDAWDIFTT LPLKRLEADV TTYSILISGF CKKGSMSKAD MLFKEMKAGG HQPNRWTYNA LIKGYLREGD AITSGELIKE
101: MKTGLLGKNF KGIKP
Best Arabidopsis Sequence Match ( AT1G12620.1 )
(BLAST)
001: MRGLIQTRLL ETGTLRTALF LSCYGRVFSS VSDGKGKVSY RERLRSGIVD IKEDDAVDLF QEMTRSRPRP RLIDFSRLFS VVARTKQYDL VLDLCKQMEL
101: KGIAHNLYTL SIMINCCCRC RKLSLAFSAM GKIIKLGYEP DTVTFSTLIN GLCLEGRVSE ALELVDRMVE MGHKPTLITL NALVNGLCLN GKVSDAVLLI
201: DRMVETGFQP NEVTYGPVLK VMCKSGQTAL AMELLRKMEE RKIKLDAVKY SIIIDGLCKD GSLDNAFNLF NEMEIKGFKA DIIIYTTLIR GFCYAGRWDD
301: GAKLLRDMIK RKITPDVVAF SALIDCFVKE GKLREAEELH KEMIQRGISP DTVTYTSLID GFCKENQLDK ANHMLDLMVS KGCGPNIRTF NILINGYCKA
401: NLIDDGLELF RKMSLRGVVA DTVTYNTLIQ GFCELGKLEV AKELFQEMVS RRVRPDIVSY KILLDGLCDN GEPEKALEIF EKIEKSKMEL DIGIYNIIIH
501: GMCNASKVDD AWDLFCSLPL KGVKPDVKTY NIMIGGLCKK GSLSEADLLF RKMEEDGHSP NGCTYNILIR AHLGEGDATK SAKLIEEIKR CGFSVDASTV
601: KMVVDMLSDG RLKKSFLDML S
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12620 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASZ8]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.