Factsheet for HORVU1Hr1G010970.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	74.94	96.87
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	33.05	91.92
HORVU0Hr1G035310.1	Barley	cytosol	64.41	91.41
HORVU1Hr1G011250.1	Barley	cytosol	32.57	91.19
HORVU0Hr1G031920.1	Barley	plastid	87.05	83.6
HORVU1Hr1G011160.2	Barley	cytosol, plastid	88.26	81.45
HORVU1Hr1G011150.1	Barley	cytosol, plastid	84.99	79.5
HORVU1Hr1G010890.5	Barley	cytosol	84.62	77.84
HORVU1Hr1G011300.3	Barley	plastid	85.59	76.85
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	43.34	74.58
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	69.37	69.04
HORVU1Hr1G014040.1	Barley	mitochondrion	69.49	68.91
HORVU6Hr1G076780.7	Barley	mitochondrion	67.31	67.48
HORVU1Hr1G013810.1	Barley	plastid	68.4	67.34
HORVU1Hr1G011400.44	Barley	plastid	49.39	66.23
HORVU1Hr1G014060.1	Barley	plastid	67.31	62.47
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	51.21	60.52
HORVU1Hr1G004750.6	Barley	plastid	58.11	60.15
KXG28799	Sorghum	plastid	51.69	56.18
Zm00001d007555_P001	Maize	plastid	54.72	55.53
HORVU6Hr1G017870.2	Barley	mitochondrion	20.1	55.33
Zm00001d007531_P001	Maize	plastid	54.48	55.28
Zm00001d007534_P001	Maize	plastid	51.94	55.21
Zm00001d007548_P001	Maize	plastid	54.36	55.16
Zm00001d007559_P001	Maize	plastid	54.36	54.96
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	47.7	51.44
KXG35774	Sorghum	cytosol, mitochondrion	29.06	50.74
HORVU1Hr1G018190.2	Barley	cytosol	16.83	48.77
Os04t0351333-00	Rice	cytosol	46.97	44.14
Os04t0349600-01	Rice	plastid	20.58	43.93
HORVU6Hr1G014310.1	Barley	mitochondrion	36.08	43.38
HORVU6Hr1G002890.6	Barley	cytosol, plastid	38.86	40.38
Solyc06g007280.2.1	Tomato	cytosol	10.41	33.73
KRH39054	Soybean	cytosol	19.73	32.8
KRH39004	Soybean	cytosol	19.49	32.39
KRH39112	Soybean	cytosol	19.49	32.39
KRH39057	Soybean	cytosol	19.25	31.99
KRH39072	Soybean	cytosol	19.01	31.65
KRH39074	Soybean	cytosol	19.01	31.59
KRH09084	Soybean	plastid	19.13	30.92
PGSC0003DMT400052977	Potato	cytosol	14.16	30.08
VIT_14s0081g00110.t01	Wine grape	cytosol	17.8	29.94
KRH39066	Soybean	cytosol	20.1	29.91
VIT_12s0028g02320.t01	Wine grape	mitochondrion	17.19	29.77
KRH09154	Soybean	mitochondrion	19.98	29.68
Bra026884.1-P	Field mustard	cytosol	16.46	29.63
KRH40513	Soybean	plastid	12.59	29.63
Solyc06g005220.2.1	Tomato	cytosol	14.53	29.56
KRH08636	Soybean	cytosol	18.52	29.31
Bra006187.1-P	Field mustard	plastid	10.29	29.21
KRH17148	Soybean	mitochondrion	19.25	29.17
KRH48615	Soybean	mitochondrion	19.25	29.17
AT1G63330.2	Thale cress	cytosol	19.61	28.98
AT5G16640.1	Thale cress	mitochondrion	17.55	28.77
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	17.43	28.51
KRH09121	Soybean	mitochondrion	18.4	28.46
KRH08639	Soybean	mitochondrion, plastid	19.37	28.32
VIT_14s0081g00120.t01	Wine grape	plastid	19.85	28.13
KRH41817	Soybean	mitochondrion	18.89	28.11
Bra027636.1-P	Field mustard	cytosol	11.02	28.09
KRH08277	Soybean	plastid	19.25	28.04
KRH09082	Soybean	cytosol	13.8	27.94
CDX68679	Canola	cytosol	3.87	27.83
Bra021192.1-P	Field mustard	plastid	16.95	27.78
AT3G22470.1	Thale cress	cytosol, mitochondrion	20.7	27.63
Bra036649.1-P	Field mustard	cytosol	13.08	27.62
Bra027029.1-P	Field mustard	mitochondrion	8.11	27.57
KRH08628	Soybean	plastid	18.4	27.54
KRH08607	Soybean	cytosol	18.64	27.45
VIT_14s0081g00270.t01	Wine grape	plastid	19.25	27.41
Bra026882.1-P	Field mustard	cytosol	17.68	27.34
PGSC0003DMT400008759	Potato	cytosol	10.53	27.27
KRH08671	Soybean	cytosol, mitochondrion	18.16	27.12
Bra036651.1-P	Field mustard	mitochondrion	17.55	27.1
Bra026954.1-P	Field mustard	mitochondrion	21.31	27.08
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	17.19	27.05
AT3G16710.1	Thale cress	mitochondrion	16.59	27.02
AT1G62670.1	Thale cress	mitochondrion	20.58	26.98
AT1G63130.1	Thale cress	mitochondrion	20.58	26.98
AT1G63070.1	Thale cress	mitochondrion	19.25	26.95
KRH08625	Soybean	plastid	18.77	26.91
AT1G62930.1	Thale cress	plastid	20.34	26.71
KRH40400	Soybean	plastid	18.64	26.69
Bra016762.1-P	Field mustard	mitochondrion	19.61	26.69
KRH09097	Soybean	plastid	18.77	26.59
Bra031731.1-P	Field mustard	mitochondrion	16.34	26.57
AT1G12300.1	Thale cress	mitochondrion	20.46	26.53
Solyc06g007810.1.1	Tomato	cytosol	8.6	26.49
KRH25652	Soybean	cytosol, golgi	17.31	26.48
AT1G12620.1	Thale cress	cytosol, mitochondrion	19.85	26.41
AT1G62590.1	Thale cress	mitochondrion	20.22	26.34
PGSC0003DMT400025074	Potato	cytosol	17.55	26.27
AT1G12775.1	Thale cress	cytosol, mitochondrion	20.46	26.24
AT1G63080.3	Thale cress	mitochondrion	19.49	26.22
Bra025516.1-P	Field mustard	cytosol, mitochondrion	15.13	26.21
AT1G62910.1	Thale cress	mitochondrion	19.98	26.11
PGSC0003DMT400008757	Potato	cytosol	15.74	26.1
KRH31646	Soybean	cytosol	16.34	26.06
Bra026958.1-P	Field mustard	mitochondrion	20.1	26.06
PGSC0003DMT400025067	Potato	cytosol	15.01	26.05
VIT_14s0030g02280.t01	Wine grape	plastid	17.68	26.02
Solyc06g007300.1.1	Tomato	extracellular	18.64	26.01
KRH09095	Soybean	plastid	18.4	25.98
VIT_14s0081g00280.t01	Wine grape	mitochondrion	20.1	25.98
KRH39050	Soybean	mitochondrion	16.71	25.94
Solyc06g007740.1.1	Tomato	cytosol	18.52	25.93
Bra026971.1-P	Field mustard	mitochondrion	19.73	25.91
Bra028267.1-P	Field mustard	mitochondrion	19.61	25.88
PGSC0003DMT400025087	Potato	endoplasmic reticulum	15.5	25.86
Bra027658.1-P	Field mustard	cytosol, mitochondrion	16.95	25.78
AT1G62680.2	Thale cress	plastid	17.07	25.73
AT1G12700.2	Thale cress	cytosol	19.25	25.73
Bra027026.1-P	Field mustard	mitochondrion	16.22	25.62
AT1G63150.1	Thale cress	mitochondrion	19.49	25.6
PGSC0003DMT400053185	Potato	mitochondrion	18.16	25.42
PGSC0003DMT400008760	Potato	mitochondrion	17.92	25.26
AT1G64580.1	Thale cress	mitochondrion	15.98	25.24
PGSC0003DMT400056665	Potato	mitochondrion	17.92	25.13
Bra026957.1-P	Field mustard	mitochondrion	18.28	25.04
PGSC0003DMT400056663	Potato	plastid	17.8	25.0
AT1G63400.1	Thale cress	cytosol, plastid	17.43	24.96
AT1G62720.1	Thale cress	mitochondrion	14.65	24.95
Bra026836.1-P	Field mustard	cytosol, mitochondrion	14.77	24.85
AT1G62914.1	Thale cress	mitochondrion	15.86	24.81
AT1G64583.1	Thale cress	mitochondrion	15.38	24.8
Bra026401.1-P	Field mustard	plastid	15.74	24.3
AT5G41170.1	Thale cress	mitochondrion	15.5	24.29
PGSC0003DMT400052971	Potato	mitochondrion	17.43	24.28
AT1G06580.1	Thale cress	mitochondrion	14.29	23.6
PGSC0003DMT400053182	Potato	cytosol	17.07	23.54
Solyc04g080120.1.1	Tomato	extracellular	17.43	23.53
PGSC0003DMT400015293	Potato	mitochondrion	17.19	23.28
PGSC0003DMT400015298	Potato	mitochondrion	17.19	23.28
AT4G26800.2	Thale cress	mitochondrion, plastid	14.29	22.96
VIT_14s0030g02260.t01	Wine grape	cytosol	12.23	22.8
KRH09085	Soybean	mitochondrion	19.01	22.3
AT1G64100.2	Thale cress	cytosol	21.67	22.21
KRH08599	Soybean	cytosol, plastid	17.92	22.12
Bra027726.1-P	Field mustard	mitochondrion	12.35	21.66
PGSC0003DMT400053556	Potato	mitochondrion	11.86	21.35
KRH12873	Soybean	cytosol	16.34	19.4
Bra027656.1-P	Field mustard	cytosol	21.67	19.02
KRH39064	Soybean	cytosol	21.07	17.96
Bra016758.1-P	Field mustard	plastid	19.98	14.24

Protein Annotations

EnsemblPlants:HORVU1Hr1G010970.1	EnsemblPlantsGene:HORVU1Hr1G010970	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF874
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI000B484FCF	UniProt:A0A287EM65	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:25974212..25977698

Molecular Weight (calculated)

90730.8 Da

IEP (calculated)

8.278

GRAVY (calculated)

0.029

Length

826 amino acids

Sequence
(BLAST)

001: MSRLRRSPAT PISSIRLLRH ISTSTPTTAS PTSRSWTPHD AFDAATEGLR AGTLRPEDAH NLFDELLRQA TPVPERSLNG FLAALARVPA SGACIRDGPA
101: LAVALFNRVC REEAGPQVAA LTVCTCNILM DCCCRARRPD LGLALFGRFL RKGLRTDQIG ANTFLKCLCY AKRTDEAVNV LLHRMSDLGC VPDAYSYNIV
201: LKALCDNSMS QRALDLLQMM AKQGGACSPD VVAYSTVIHG FFNEGETGKA CSLFHEMTRQ GVKPSVVTYN SIIDALCKAR AMDKAELVLR QMTTNGAQPD
301: TVTYNCMIHG YATLGRLKEA AKMFRKMKSR GLIPDIVTCN SLLASLCKHG RSKEAAEFFD SMTAKGHKPD TVSYCILLHG HGTEGCFADM IGLFNSMKSN
401: GIAADCRVFT ILIDAYAKRG MVDDVMLIFT EMQQQGVSPN VVTYSTVIAV LSRMGRLTDA MEKFNQMVAR GIQPNTTVYH SIIQSFCMHG GLVKAKELVS
501: EMINKGIPRP DIVFFNSVIN SLCKDGRVMD AHDIFDLVID IGERPDVITF TSLIDGYCLV GKMDKAFGML DAMELVGVEP NIVTYSTLVN GYCKNRRIDD
601: GLTLFREMLC KGFKPDTITY NIILDGLFRS GRTVAARKMF HEMIESGTTV TISTYGIILG GLCRNNCADE AIVLFQKLGA MNVKFSITIL NTMINAMYKV
701: QRKEEAKELF AAISDSGLLP NESTYGVMIK NLLKDGAVED ANNMFSSMEK SGIVPSSRLI NGIIRLLLDN GEIAKAGNYL SKVDGKRILL EASTTSLMLS
801: LFSRKGKYHE DMTLLPAKYQ FFDGCS

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.