Factsheet for HORVU7Hr1G029840.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G038600.1	Wheat	cytosol	45.49	87.6
HORVU1Hr1G004750.6	Barley	plastid	97.42	85.34
TraesCS1B01G039700.1	Wheat	cytosol	72.39	83.22
TraesCS2B01G126900.1	Wheat	cytosol	45.35	82.98
TraesCS1D01G033000.1	Wheat	cytosol	47.5	82.18
TraesCS1A01G031600.1	Wheat	cytosol	77.25	81.57
TraesCS1B01G038400.1	Wheat	cytosol	70.67	81.25
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	83.4	74.08
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	81.26	71.72
TraesCS1B01G039100.1	Wheat	mitochondrion	79.54	71.01
TraesCS1B01G039200.1	Wheat	mitochondrion	77.97	69.52
TraesCS1B01G038500.1	Wheat	mitochondrion	77.97	68.99
TraesCS1B01G038300.1	Wheat	plastid	53.79	68.86
TraesCS1A01G031700.1	Wheat	plastid	69.81	65.86
TraesCS1B01G038200.1	Wheat	mitochondrion	58.08	64.14
HORVU0Hr1G035310.1	Barley	cytosol	51.93	62.37
HORVU1Hr1G011250.1	Barley	cytosol	26.18	62.03
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.22	58.22
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.03	56.57
KXG35774	Sorghum	cytosol, mitochondrion	34.76	51.37
HORVU1Hr1G010970.1	Barley	mitochondrion	60.52	51.21
HORVU6Hr1G017870.2	Barley	mitochondrion	21.89	51.0
TraesCS1B01G315500.1	Wheat	mitochondrion	23.32	50.78
Zm00001d007534_P001	Maize	plastid	56.37	50.71
HORVU6Hr1G076780.7	Barley	mitochondrion	59.66	50.61
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	60.09	50.6
HORVU1Hr1G014040.1	Barley	mitochondrion	60.23	50.54
HORVU1Hr1G013810.1	Barley	plastid	60.37	50.3
KXG28799	Sorghum	plastid	54.65	50.26
HORVU0Hr1G031920.1	Barley	plastid	61.09	49.65
Zm00001d007531_P001	Maize	plastid	56.8	48.77
Zm00001d007548_P001	Maize	plastid	56.65	48.65
Zm00001d007555_P001	Maize	plastid	56.65	48.65
Zm00001d007559_P001	Maize	plastid	56.51	48.35
HORVU1Hr1G011150.1	Barley	cytosol, plastid	60.09	47.57
HORVU1Hr1G011160.2	Barley	cytosol, plastid	60.66	47.37
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	51.5	47.0
HORVU1Hr1G010890.5	Barley	cytosol	59.51	46.33
HORVU1Hr1G014060.1	Barley	plastid	58.23	45.73
HORVU1Hr1G011300.3	Barley	plastid	59.8	45.43
HORVU1Hr1G011400.44	Barley	plastid	37.2	42.21
HORVU1Hr1G018190.2	Barley	cytosol	17.02	41.75
Os04t0351333-00	Rice	cytosol	50.93	40.5
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	26.47	38.54
HORVU6Hr1G002890.6	Barley	cytosol, plastid	41.49	36.48
HORVU6Hr1G014310.1	Barley	mitochondrion	35.19	35.81
Os04t0349600-01	Rice	plastid	18.88	34.11
Solyc06g007280.2.1	Tomato	cytosol	11.3	30.98
VIT_12s0028g02320.t01	Wine grape	mitochondrion	20.89	30.61
VIT_14s0081g00110.t01	Wine grape	cytosol	21.32	30.35
Bra027029.1-P	Field mustard	mitochondrion	10.44	30.04
KRH39004	Soybean	cytosol	21.17	29.78
Bra027636.1-P	Field mustard	cytosol	13.73	29.63
KRH39054	Soybean	cytosol	21.03	29.58
PGSC0003DMT400052977	Potato	cytosol	16.45	29.56
KRH39074	Soybean	cytosol	20.89	29.38
KRH39072	Soybean	cytosol	20.6	29.03
KRH39112	Soybean	cytosol	20.6	28.97
KRH39057	Soybean	cytosol	20.46	28.77
Bra006187.1-P	Field mustard	plastid	11.87	28.52
Solyc06g005220.2.1	Tomato	cytosol	16.31	28.08
KRH40513	Soybean	plastid	13.88	27.64
Bra036649.1-P	Field mustard	cytosol	15.45	27.62
KRH09084	Soybean	plastid	20.17	27.59
AT5G16640.1	Thale cress	mitochondrion	19.89	27.58
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	19.74	27.33
KRH09082	Soybean	cytosol	15.88	27.21
Solyc06g007810.1.1	Tomato	cytosol	10.3	26.87
KRH17148	Soybean	mitochondrion	20.89	26.79
Bra026882.1-P	Field mustard	cytosol	20.46	26.78
Bra026884.1-P	Field mustard	cytosol	17.31	26.36
PGSC0003DMT400008759	Potato	cytosol	12.02	26.33
KRH39066	Soybean	cytosol	20.89	26.31
KRH08636	Soybean	cytosol	19.6	26.25
KRH48615	Soybean	mitochondrion	20.46	26.24
KRH41817	Soybean	mitochondrion	20.74	26.13
VIT_14s0081g00270.t01	Wine grape	plastid	21.6	26.03
AT1G63330.2	Thale cress	cytosol	20.74	25.94
KRH25652	Soybean	cytosol, golgi	20.03	25.93
VIT_14s0081g00120.t01	Wine grape	plastid	21.6	25.9
KRH31646	Soybean	cytosol	19.17	25.87
KRH09121	Soybean	mitochondrion	19.74	25.84
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	19.17	25.52
CDX68679	Canola	cytosol	4.15	25.22
KRH08628	Soybean	plastid	19.74	25.0
KRH08639	Soybean	mitochondrion, plastid	20.17	24.96
KRH08671	Soybean	cytosol, mitochondrion	19.74	24.95
KRH08277	Soybean	plastid	20.17	24.87
AT3G16710.1	Thale cress	mitochondrion	18.03	24.85
Bra021192.1-P	Field mustard	plastid	17.88	24.8
KRH08607	Soybean	cytosol	19.89	24.78
Bra036651.1-P	Field mustard	mitochondrion	18.88	24.67
KRH09154	Soybean	mitochondrion	19.6	24.64
KRH39050	Soybean	mitochondrion	18.6	24.44
VIT_14s0081g00280.t01	Wine grape	mitochondrion	22.32	24.41
PGSC0003DMT400008757	Potato	cytosol	17.31	24.3
PGSC0003DMT400025087	Potato	endoplasmic reticulum	17.17	24.24
KRH08625	Soybean	plastid	19.74	23.96
PGSC0003DMT400025067	Potato	cytosol	16.31	23.95
PGSC0003DMT400025074	Potato	cytosol	18.88	23.91
AT1G64583.1	Thale cress	mitochondrion	17.45	23.83
Solyc06g007300.1.1	Tomato	extracellular	20.17	23.82
KRH40400	Soybean	plastid	19.6	23.74
VIT_14s0030g02280.t01	Wine grape	plastid	19.03	23.71
Bra025516.1-P	Field mustard	cytosol, mitochondrion	16.17	23.69
AT1G62914.1	Thale cress	mitochondrion	17.88	23.67
AT1G12620.1	Thale cress	cytosol, mitochondrion	21.03	23.67
AT1G62670.1	Thale cress	mitochondrion	21.32	23.65
AT1G63130.1	Thale cress	mitochondrion	21.32	23.65
Bra031731.1-P	Field mustard	mitochondrion	17.17	23.62
AT1G62930.1	Thale cress	plastid	21.17	23.53
AT3G22470.1	Thale cress	cytosol, mitochondrion	20.74	23.42
KRH09097	Soybean	plastid	19.46	23.33
AT1G64580.1	Thale cress	mitochondrion	17.45	23.33
AT1G63400.1	Thale cress	cytosol, plastid	19.17	23.22
PGSC0003DMT400053185	Potato	mitochondrion	19.6	23.22
Solyc06g007740.1.1	Tomato	cytosol	19.6	23.22
AT1G62680.2	Thale cress	plastid	18.17	23.18
AT1G63080.3	Thale cress	mitochondrion	20.31	23.13
AT1G12300.1	Thale cress	mitochondrion	21.03	23.08
AT1G63070.1	Thale cress	mitochondrion	19.46	23.05
VIT_14s0030g02260.t01	Wine grape	cytosol	14.59	23.02
Bra027658.1-P	Field mustard	cytosol, mitochondrion	17.88	23.02
AT1G06580.1	Thale cress	mitochondrion	16.45	23.0
Bra026971.1-P	Field mustard	mitochondrion	20.6	22.89
AT1G62720.1	Thale cress	mitochondrion	15.88	22.89
AT1G62590.1	Thale cress	mitochondrion	20.74	22.87
AT1G12775.1	Thale cress	cytosol, mitochondrion	21.03	22.83
AT1G12700.2	Thale cress	cytosol	20.17	22.82
AT5G41170.1	Thale cress	mitochondrion	17.17	22.77
Bra027026.1-P	Field mustard	mitochondrion	17.02	22.75
KRH09095	Soybean	plastid	19.03	22.73
AT1G62910.1	Thale cress	mitochondrion	20.46	22.63
Solyc04g080120.1.1	Tomato	extracellular	19.74	22.55
PGSC0003DMT400052971	Potato	mitochondrion	19.03	22.43
AT1G63150.1	Thale cress	mitochondrion	20.17	22.42
Bra026836.1-P	Field mustard	cytosol, mitochondrion	15.74	22.4
Bra028267.1-P	Field mustard	mitochondrion	20.03	22.36
PGSC0003DMT400015293	Potato	mitochondrion	19.46	22.3
PGSC0003DMT400015298	Potato	mitochondrion	19.46	22.3
PGSC0003DMT400056663	Potato	plastid	18.6	22.11
Bra026958.1-P	Field mustard	mitochondrion	20.03	21.98
Bra016762.1-P	Field mustard	mitochondrion	18.88	21.75
Bra026957.1-P	Field mustard	mitochondrion	18.74	21.72
PGSC0003DMT400056665	Potato	mitochondrion	18.17	21.56
KRH08599	Soybean	cytosol, plastid	20.6	21.52
Bra026401.1-P	Field mustard	plastid	16.45	21.5
Bra026954.1-P	Field mustard	mitochondrion	19.46	20.92
PGSC0003DMT400053556	Potato	mitochondrion	13.73	20.91
PGSC0003DMT400053182	Potato	cytosol	17.88	20.87
PGSC0003DMT400008760	Potato	mitochondrion	17.45	20.82
Bra027726.1-P	Field mustard	mitochondrion	14.02	20.81
AT4G26800.2	Thale cress	mitochondrion, plastid	14.88	20.23
KRH09085	Soybean	mitochondrion	19.89	19.74
KRH12873	Soybean	cytosol	19.03	19.11
AT1G64100.2	Thale cress	cytosol	22.03	19.11
Bra027656.1-P	Field mustard	cytosol	22.32	16.58
KRH39064	Soybean	cytosol	22.46	16.2
Bra016758.1-P	Field mustard	plastid	20.17	12.17

Protein Annotations

EnsemblPlants:HORVU7Hr1G029840.1	EnsemblPlantsGene:HORVU7Hr1G029840	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF874
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI000B482DE2	UniProt:A0A287VVY4	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:56753590..56755908

Molecular Weight (calculated)

76958.4 Da

IEP (calculated)

7.366

GRAVY (calculated)

0.126

Length

699 amino acids

Sequence
(BLAST)

001: VMCRVGVSAY GVQPASHPQG CQXXXXXPTT CTYGILMDCC CRAHRLDLAL AFFGRLFRTG LEAEQFVFNT LLKGLCHAKR ADEALEVLLH RMSELGCIPD
101: VVAYNMVIHG FFKEGQAGKA CSLFHEMAQL GVMPNVVTYT SVINALCKAK AMDKAEYFLR QMVDNGVVPN NVTYNSLVHG YSSSGHQKEA VRVLKEMTSQ
201: GIIPDVVTCN TLMASLCKNR RSKEAAEIID YMVVKGLKPD IVSYSILLHG YANEGCLVDM TNLFNSMTRA GILPDCHALN ILINAYAKSG MMDEAMLIFK
301: GMRKQGVTPD VVTYSTVIDA FCKMGSLDDA MVKFNQMIDM GVQPDTAVYR SLIQSFCTHG DLVKAKELVT EMRNKGMRPP DIMFFHSIMQ NLCTEGRVIE
401: ARDILDLIVH IGMRPDVFTF SLLIGGYCLV CKMADASKIY DDMMSYGLEP SNMTYGILIN GYCKNRRIDD GLILFKEMLC KGLKPTTFNY NVILDGLFLA
501: GRTVAAKEKF NEMVESGVSV CIDTYSIVLG GLCRNNCSSE AITLFQKLST MNVKFNIAIV NIIIGAFYRV QRNQEAKDLF AAVSANGLVA DVFTYTIIMS
601: NLIKEGSVEE ADNLFSSMEK SGCTADSYML NLIIRRLLEK GEIVKAGNYM SKVDAKSYSL EAKTVSLLIS LFSGKGKYRE HIRLLPTKYQ FHEEAGTVE

Best Arabidopsis Sequence Match ( AT3G22470.1 )
(BLAST)

001: MIQRLIPLNR KASNFTQILE KGTSLLHYSS ITEAKLSYKE RLRNGIVDIK VNDAIDLFES MIQSRPLPTP IDFNRLCSAV ARTKQYDLVL GFCKGMELNG
101: IEHDMYTMTI MINCYCRKKK LLFAFSVLGR AWKLGYEPDT ITFSTLVNGF CLEGRVSEAV ALVDRMVEMK QRPDLVTVST LINGLCLKGR VSEALVLIDR
201: MVEYGFQPDE VTYGPVLNRL CKSGNSALAL DLFRKMEERN IKASVVQYSI VIDSLCKDGS FDDALSLFNE MEMKGIKADV VTYSSLIGGL CNDGKWDDGA
301: KMLREMIGRN IIPDVVTFSA LIDVFVKEGK LLEAKELYNE MITRGIAPDT ITYNSLIDGF CKENCLHEAN QMFDLMVSKG CEPDIVTYSI LINSYCKAKR
401: VDDGMRLFRE ISSKGLIPNT ITYNTLVLGF CQSGKLNAAK ELFQEMVSRG VPPSVVTYGI LLDGLCDNGE LNKALEIFEK MQKSRMTLGI GIYNIIIHGM
501: CNASKVDDAW SLFCSLSDKG VKPDVVTYNV MIGGLCKKGS LSEADMLFRK MKEDGCTPDD FTYNILIRAH LGGSGLISSV ELIEEMKVCG FSADSSTIKM
601: VIDMLSDRRL DKSFLDMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q6NQ83]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.