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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • cytosol 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc07g065490.2.1
Solyc10g006000.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 Solyc07g065490.2.1 AT4G26630.1 25387881
AT1G62670.1 Solyc10g006000.2.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400052977 Potato cytosol 58.78 89.46
Solyc06g007280.2.1 Tomato cytosol 37.67 87.45
PGSC0003DMT400052971 Potato mitochondrion 86.66 86.51
Solyc06g007740.1.1 Tomato cytosol 79.56 79.83
Solyc06g005220.2.1 Tomato cytosol 50.0 72.91
Solyc06g007810.1.1 Tomato cytosol 30.74 67.91
Solyc04g080120.1.1 Tomato extracellular 50.34 48.69
VIT_12s0028g02320.t01 Wine grape mitochondrion 35.3 43.82
VIT_14s0081g00270.t01 Wine grape plastid 42.91 43.79
VIT_14s0081g00120.t01 Wine grape plastid 40.37 40.99
VIT_14s0081g00110.t01 Wine grape cytosol 33.78 40.73
Bra027636.1-P Field mustard cytosol 21.45 39.2
CDY09968 Canola cytosol 19.26 38.78
KRH70370 Soybean cytosol 35.3 38.42
CDY39810 Canola cytosol 25.34 38.36
CDY51169 Canola cytosol 27.36 38.3
CDY06217 Canola cytosol 18.92 38.23
VIT_14s0081g00280.t01 Wine grape mitochondrion 41.22 38.18
Bra036649.1-P Field mustard cytosol 25.17 38.11
CDY03257 Canola cytosol 25.17 38.11
CDY16110 Canola extracellular 26.18 37.8
Bra031731.1-P Field mustard mitochondrion 32.26 37.6
Bra027029.1-P Field mustard mitochondrion 15.37 37.45
CDX71969 Canola cytosol 25.0 37.37
Bra026884.1-P Field mustard cytosol 28.89 37.25
Bra026882.1-P Field mustard cytosol 33.45 37.08
VIT_14s0030g02280.t01 Wine grape plastid 34.97 36.9
AT1G63330.2 Thale cress cytosol 34.8 36.85
CDY33797 Canola mitochondrion 31.59 36.52
CDX67634 Canola cytosol 26.01 36.41
AT5G16640.1 Thale cress mitochondrion 30.91 36.31
CDY34870 Canola mitochondrion 17.57 36.24
AT1G63130.1 Thale cress mitochondrion 38.51 36.19
CDY31272 Canola mitochondrion 34.63 36.09
KRH38755 Soybean mitochondrion 36.15 36.03
CDY00489 Canola mitochondrion 35.64 36.01
AT1G12700.2 Thale cress cytosol 37.5 35.92
KRH49698 Soybean cytosol 34.46 35.79
AT1G12620.1 Thale cress cytosol, mitochondrion 37.5 35.75
CDY16002 Canola cytosol 18.75 35.69
CDY16031 Canola cytosol 18.75 35.69
CDY26607 Canola cytosol 27.53 35.67
CDY34688 Canola cytosol 21.79 35.64
CDY65983 Canola mitochondrion 25.34 35.55
AT1G62720.1 Thale cress mitochondrion 29.05 35.46
AT3G22470.1 Thale cress cytosol, mitochondrion 36.99 35.38
KRH75045 Soybean mitochondrion 35.64 35.34
Bra026957.1-P Field mustard mitochondrion 35.98 35.32
AT1G12300.1 Thale cress mitochondrion 38.01 35.32
Bra026958.1-P Field mustard mitochondrion 38.01 35.32
Bra028267.1-P Field mustard mitochondrion 37.33 35.3
CDY46909 Canola mitochondrion 17.4 35.27
AT1G63070.1 Thale cress mitochondrion 35.14 35.25
CDX69436 Canola plastid 29.56 35.14
KRH75063 Soybean mitochondrion, plastid 35.81 35.1
KRH09256 Soybean mitochondrion 33.11 35.06
KRH75048 Soybean mitochondrion 35.98 35.03
CDY25492 Canola mitochondrion 29.05 35.03
CDY34375 Canola mitochondrion 30.57 35.01
AT1G63150.1 Thale cress mitochondrion 37.16 34.98
CDY26565 Canola mitochondrion 33.61 34.97
Bra016762.1-P Field mustard mitochondrion 35.81 34.93
CDY68929 Canola mitochondrion 35.81 34.93
CDY26588 Canola extracellular 19.09 34.88
AT1G62910.1 Thale cress mitochondrion 37.16 34.81
CDY26589 Canola cytosol 4.05 34.78
AT1G62670.1 Thale cress mitochondrion 36.99 34.76
Bra006187.1-P Field mustard plastid 17.06 34.71
AT1G62930.1 Thale cress plastid 36.82 34.66
CDY26593 Canola cytosol 35.64 34.65
Bra027026.1-P Field mustard mitochondrion 30.41 34.42
Bra026971.1-P Field mustard mitochondrion 36.49 34.34
AT1G62680.2 Thale cress plastid 31.59 34.12
CDY46912 Canola mitochondrion 28.38 34.01
AT1G06580.1 Thale cress mitochondrion 28.72 34.0
CDY16033 Canola cytosol 8.61 34.0
AT1G62590.1 Thale cress mitochondrion 36.32 33.91
Bra025516.1-P Field mustard cytosol, mitochondrion 27.2 33.75
CDY31271 Canola mitochondrion 27.7 33.74
KRH58843 Soybean nucleus 34.8 33.72
CDY08386 Canola cytosol 25.34 33.71
AT1G63080.3 Thale cress mitochondrion 34.8 33.55
AT1G12775.1 Thale cress cytosol, mitochondrion 36.49 33.54
Bra026954.1-P Field mustard mitochondrion 36.82 33.54
Bra027658.1-P Field mustard cytosol, mitochondrion 30.74 33.52
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 31.08 33.52
Bra026836.1-P Field mustard cytosol, mitochondrion 27.7 33.4
Bra021192.1-P Field mustard plastid 28.38 33.33
CDY49646 Canola mitochondrion 28.21 33.33
CDY48949 Canola mitochondrion 27.03 33.26
KRH42744 Soybean mitochondrion 34.29 33.22
AT1G64583.1 Thale cress mitochondrion 28.72 33.2
CDY34969 Canola mitochondrion 28.38 33.2
AT1G63400.1 Thale cress cytosol, plastid 32.26 33.1
Bra036651.1-P Field mustard mitochondrion 29.9 33.08
CDY46394 Canola mitochondrion 26.86 33.06
CDY35831 Canola mitochondrion 28.72 33.01
AT3G16710.1 Thale cress mitochondrion 28.21 32.94
CDY66358 Canola mitochondrion 21.45 32.56
AT1G62914.1 Thale cress mitochondrion 28.89 32.39
AT1G64580.1 Thale cress mitochondrion 28.55 32.31
CDY33753 Canola mitochondrion 23.99 31.98
VIT_14s0030g02260.t01 Wine grape cytosol 23.65 31.6
CDY16032 Canola mitochondrion 21.62 31.37
AT5G41170.1 Thale cress mitochondrion 27.7 31.12
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.54 30.98
CDY16003 Canola cytosol, plastid 20.44 30.95
AT4G26800.2 Thale cress mitochondrion, plastid 26.18 30.16
CDY25522 Canola mitochondrion, plastid 22.47 29.75
CDY47835 Canola mitochondrion 21.79 29.52
CDY28348 Canola mitochondrion, plastid 29.39 29.1
Bra027726.1-P Field mustard mitochondrion 23.14 29.09
CDY25519 Canola mitochondrion, plastid 31.08 28.8
CDY29251 Canola mitochondrion 24.49 28.6
TraesCS2B01G126900.1 Wheat cytosol 18.41 28.53
TraesCS1A01G067700.1 Wheat extracellular 16.22 28.49
HORVU1Hr1G018190.2 Barley cytosol 13.68 28.42
CDX89301 Canola plastid 25.17 27.85
Zm00001d018982_P001 Maize mitochondrion 16.39 27.71
Bra026401.1-P Field mustard plastid 25.0 27.66
TraesCS6B01G127200.1 Wheat cytosol 16.05 27.62
HORVU1Hr1G011250.1 Barley cytosol 13.68 27.46
CDX68680 Canola mitochondrion 20.95 26.84
Os10t0495100-01 Rice cytosol, mitochondrion 20.27 26.03
HORVU6Hr1G017870.2 Barley mitochondrion 13.18 26.0
CDY66357 Canola cytosol 16.55 25.86
AT1G64100.2 Thale cress cytosol 35.14 25.81
TraesCS6D01G083300.1 Wheat mitochondrion 19.43 25.78
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 16.39 25.66
TraesCS6A01G015000.1 Wheat mitochondrion 17.91 25.54
Os10t0501700-00 Rice cytosol 19.43 25.33
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 13.85 25.23
TraesCS1D01G058000.1 Wheat cytosol 17.23 25.12
TraesCS6B01G127500.1 Wheat cytosol 20.78 25.1
Os10t0497366-00 Rice mitochondrion 16.89 24.94
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 21.11 24.85
TraesCS6D01G083100.1 Wheat cytosol 20.44 24.69
TraesCSU01G090200.1 Wheat cytosol 18.41 24.66
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 18.24 24.6
TraesCS6D01G017800.1 Wheat cytosol 22.3 24.58
Os08t0248400-01 Rice mitochondrion 18.24 24.55
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 15.54 24.27
TraesCSU01G089800.1 Wheat mitochondrion 14.36 24.22
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 19.76 24.17
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 20.61 24.16
TraesCS6D01G083400.1 Wheat mitochondrion 20.1 24.14
TraesCSU01G089700.1 Wheat mitochondrion 19.59 24.07
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 19.26 23.7
TraesCS6D01G076500.1 Wheat plastid 18.07 23.62
OQU82832 Sorghum cytosol 11.32 23.43
Os08t0107700-01 Rice cytosol, mitochondrion 14.7 23.26
Os10t0499500-01 Rice mitochondrion 19.76 23.12
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 19.93 23.09
TraesCS1B01G038200.1 Wheat mitochondrion 24.49 22.91
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 16.72 22.86
TraesCS7D01G231400.1 Wheat cytosol, plastid 15.54 22.83
TraesCS1B01G315500.1 Wheat mitochondrion 12.33 22.74
CDY34370 Canola cytosol 31.42 22.66
KXG34536 Sorghum mitochondrion 21.79 22.55
TraesCS6B01G021600.1 Wheat mitochondrion 27.2 22.49
HORVU6Hr1G014310.1 Barley mitochondrion 26.01 22.42
OQU88594 Sorghum cytosol 19.76 22.41
TraesCS1D01G068600.1 Wheat plastid 12.84 22.35
TraesCS6A01G083000.1 Wheat cytosol 17.06 22.15
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 26.69 22.13
TraesCS1B01G085400.1 Wheat cytosol 23.82 22.0
HORVU0Hr1G035310.1 Barley cytosol 21.62 21.99
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 26.52 21.96
TraesCS1D01G058400.1 Wheat cytosol 19.09 21.94
CDX81633 Canola extracellular, golgi, plasma membrane 33.61 21.89
TraesCS7B01G469500.1 Wheat cytosol 20.78 21.89
Os08t0107800-01 Rice mitochondrion 22.97 21.79
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 9.29 21.74
EER95949 Sorghum mitochondrion 24.32 21.72
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 17.57 21.67
TraesCS1A01G031600.1 Wheat cytosol 23.99 21.45
TraesCS1B01G038400.1 Wheat cytosol 21.96 21.38
KXG35774 Sorghum cytosol, mitochondrion 17.06 21.35
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 25.68 21.26
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 25.68 21.26
TraesCS1D01G057800.1 Wheat mitochondrion 13.01 21.21
TraesCS1B01G072700.1 Wheat cytosol 18.24 21.18
TraesCS6D01G047700.1 Wheat mitochondrion 24.66 21.13
TraesCS1B01G072300.1 Wheat plastid 20.27 21.13
TraesCS1B01G092600.1 Wheat plastid 18.41 21.08
TraesCS1D01G055300.1 Wheat cytosol 21.96 21.04
Zm00001d009733_P001 Maize cytosol 28.21 21.01
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 23.48 20.93
EES09203 Sorghum cytosol 28.21 20.93
EES07882 Sorghum cytosol 27.36 20.85
TraesCS6D01G017700.1 Wheat plastid 18.75 20.79
TraesCS1D01G056700.1 Wheat cytosol 21.28 20.76
TraesCS1A01G031700.1 Wheat plastid 25.84 20.65
TraesCS1A01G054800.1 Wheat cytosol 20.27 20.62
TraesCS2A01G531000.1 Wheat golgi 23.65 20.62
TraesCS6B01G114300.1 Wheat cytosol 13.51 20.57
Os10t0495200-01 Rice mitochondrion 27.03 20.46
TraesCS1D01G068900.1 Wheat mitochondrion 27.87 20.3
TraesCS2D01G532500.1 Wheat plastid 23.31 20.29
TraesCS1B01G039700.1 Wheat cytosol 20.78 20.23
CDY15970 Canola cytosol 3.21 20.21
TraesCS2D01G533000.1 Wheat cytosol, extracellular 22.47 20.18
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 11.66 20.18
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 23.82 20.17
Os10t0497300-01 Rice mitochondrion 27.03 20.15
TraesCS1B01G085900.1 Wheat mitochondrion 27.7 20.15
TraesCS1B01G073200.1 Wheat cytosol 10.3 20.13
TraesCS1B01G086000.1 Wheat plastid 23.31 20.12
OQU82836 Sorghum cytosol 20.78 20.1
Bra027656.1-P Field mustard cytosol 31.93 20.09
TraesCS6D01G290900.1 Wheat mitochondrion 24.83 20.05
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 21.62 20.03
TraesCS1B01G038500.1 Wheat mitochondrion 26.69 20.0
KXG27690 Sorghum cytosol, plastid 24.66 19.97
TraesCS1B01G073100.1 Wheat cytosol 20.44 19.97
OQU82856 Sorghum cytosol 25.34 19.95
OQU82831 Sorghum cytosol 20.61 19.9
TraesCS1A01G067400.1 Wheat mitochondrion 27.7 19.88
TraesCS2B01G560300.1 Wheat cytosol 19.09 19.86
OQU82823 Sorghum cytosol 26.69 19.82
TraesCS2D01G532400.1 Wheat cytosol 20.44 19.8
OQU82827 Sorghum cytosol 26.52 19.7
TraesCS1B01G072400.1 Wheat cytosol 22.97 19.57
TraesCS1A01G067000.1 Wheat mitochondrion 23.65 19.55
Os10t0497432-01 Rice mitochondrion 8.78 19.55
TraesCS2D01G532300.1 Wheat plastid 25.68 19.54
TraesCS2A01G526200.1 Wheat golgi 22.47 19.53
TraesCS1A01G073800.1 Wheat mitochondrion 10.98 19.52
HORVU6Hr1G002890.6 Barley cytosol, plastid 26.18 19.5
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 22.13 19.47
TraesCS1D01G068400.1 Wheat mitochondrion 27.03 19.44
TraesCS1A01G067600.1 Wheat mitochondrion 26.69 19.43
Os04t0349600-01 Rice plastid 12.67 19.38
TraesCS2B01G559900.1 Wheat cytosol 17.74 19.37
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 22.8 19.37
KXG28799 Sorghum plastid 24.83 19.34
HORVU0Hr1G031920.1 Barley plastid 28.04 19.3
TraesCS1B01G075300.1 Wheat cytosol 19.43 19.26
OQU80148 Sorghum mitochondrion 23.65 19.26
TraesCS6A01G014600.1 Wheat cytosol 12.84 19.24
TraesCS2D01G532100.1 Wheat mitochondrion 22.47 19.22
TraesCS1D01G068500.1 Wheat mitochondrion 26.35 19.21
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.68 19.19
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.51 19.19
TraesCS1B01G071600.1 Wheat mitochondrion 27.36 19.1
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 25.17 19.1
TraesCS1A01G054700.2 Wheat mitochondrion 26.18 19.09
TraesCS2D01G532600.1 Wheat plastid 25.0 19.07
HORVU1Hr1G004750.6 Barley plastid 25.68 19.05
TraesCS1B01G085300.1 Wheat mitochondrion 25.34 18.94
TraesCS1B01G039100.1 Wheat mitochondrion 25.0 18.9
Bra016758.1-P Field mustard plastid 36.82 18.81
Zm00001d007534_P001 Maize plastid 24.66 18.79
KXG19780 Sorghum cytosol 18.75 18.78
Zm00001d007548_P001 Maize plastid 25.68 18.67
Zm00001d007555_P001 Maize plastid 25.68 18.67
TraesCS1D01G056200.1 Wheat mitochondrion 26.01 18.67
TraesCS1D01G069100.1 Wheat mitochondrion 20.27 18.66
HORVU1Hr1G010970.1 Barley mitochondrion 26.01 18.64
TraesCS1D01G068800.1 Wheat plastid 25.68 18.63
Zm00001d007559_P001 Maize plastid 25.68 18.6
TraesCS1A01G054500.1 Wheat mitochondrion 24.49 18.59
Zm00001d007531_P001 Maize plastid 25.51 18.55
TraesCS1A01G057300.1 Wheat cytosol 22.47 18.52
HORVU6Hr1G076780.7 Barley mitochondrion 25.68 18.45
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 25.84 18.43
TraesCS2A01G530600.1 Wheat cytosol 23.82 18.43
TraesCS1B01G039200.1 Wheat mitochondrion 24.32 18.37
Os08t0110200-01 Rice mitochondrion 24.66 18.3
TraesCS2A01G531100.1 Wheat cytosol 17.57 18.28
HORVU1Hr1G011150.1 Barley cytosol, plastid 27.2 18.23
HORVU1Hr1G011160.2 Barley cytosol, plastid 27.53 18.21
HORVU1Hr1G010890.5 Barley cytosol 27.53 18.15
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 23.31 18.02
TraesCS6A01G311600.1 Wheat mitochondrion 25.34 17.94
TraesCS1D01G076500.1 Wheat mitochondrion 20.1 17.92
TraesCS1B01G072900.2 Wheat mitochondrion 26.35 17.87
TraesCS2B01G560700.1 Wheat plastid 23.14 17.77
HORVU1Hr1G013810.1 Barley plastid 25.0 17.64
CDY31277 Canola plastid 28.38 17.52
TraesCS1B01G092500.1 Wheat mitochondrion 23.14 17.5
HORVU1Hr1G014040.1 Barley mitochondrion 24.49 17.41
HORVU1Hr1G014060.1 Barley plastid 26.01 17.3
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 20.95 17.29
HORVU1Hr1G011300.3 Barley plastid 26.86 17.28
TraesCS1A01G055800.1 Wheat mitochondrion 22.3 17.12
TraesCS1A01G073600.1 Wheat mitochondrion 11.15 16.84
TraesCS1B01G084800.1 Wheat cytosol 13.18 16.81
Zm00001d009735_P001 Maize cytosol 27.53 16.75
TraesCS1D01G076900.1 Wheat plastid 18.58 16.74
TraesCS1A01G073700.1 Wheat cytosol 10.47 16.1
Os04t0351333-00 Rice cytosol 23.65 15.93
TraesCS1D01G068700.1 Wheat cytosol 11.49 15.49
OQU82833 Sorghum cytosol 11.66 15.4
OQU82834 Sorghum cytosol 24.66 15.16
TraesCS1D01G076700.1 Wheat cytosol 8.45 14.97
TraesCS6B01G129100.1 Wheat cytosol, plastid 7.09 14.58
TraesCS1D01G058500.1 Wheat plastid 14.02 14.56
HORVU1Hr1G011400.44 Barley plastid 15.03 14.45
TraesCS6B01G341800.2 Wheat cytosol 9.63 14.29
TraesCS1A01G074000.1 Wheat mitochondrion 6.76 14.13
TraesCS1D01G076400.1 Wheat cytosol 8.61 14.05
TraesCS1A01G056000.1 Wheat cytosol 9.46 13.93
TraesCS1D01G056600.1 Wheat mitochondrion 4.73 13.86
TraesCS1A01G066600.1 Wheat mitochondrion 6.08 13.69
TraesCS1D01G033000.1 Wheat cytosol 9.29 13.61
TraesCS1A01G055500.1 Wheat mitochondrion 4.9 13.36
CDY34680 Canola cytosol 20.44 13.27
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 5.07 13.16
TraesCS1D01G067600.1 Wheat cytosol 7.94 12.88
TraesCS1B01G038600.1 Wheat cytosol 7.77 12.67
TraesCS1A01G067800.1 Wheat cytosol 7.94 12.57
TraesCS1B01G038300.1 Wheat plastid 11.15 12.09
TraesCS1A01G055600.1 Wheat cytosol 6.42 11.69
TraesCS1D01G057700.1 Wheat cytosol 6.42 11.69
OQU88581 Sorghum cytosol 20.61 11.22
TraesCS2D01G532200.1 Wheat cytosol 5.24 10.58
CDY21063 Canola plastid 1.86 2.0
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003824
GO:GO:0004518GO:GO:0004519GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009451GO:GO:0009987
GO:GO:0016787GO:GO:0043231GO:GO:0090305InterPro:IPR002885InterPro:IPR011990UniProt:K4C3B3
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF1649
InterPro:Pentatricopeptide_repeatSUPFAM:SSF81901EnsemblPlantsGene:Solyc06g007300.1EnsemblPlants:Solyc06g007300.1.1TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sf
UniParc:UPI000276610A:::::
Description
No Description!
Coordinates
chr6:-:1326150..1327928
Molecular Weight (calculated)
66928.3 Da
IEP (calculated)
7.871
GRAVY (calculated)
0.060
Length
592 amino acids
Sequence
(BLAST)
001: MRRISLRNGN GNGISFISFS ADSVITGRSC SSCDYSKESI SVKDKIGVNS SNLDDAVTLF HQMVTMKPLP SVVDFSKLFK TMIKMKHYSA AISLFRQMLK
101: LGIPINNFIL SIMINSYCLM CRVDCAFSVL PIYLKNGIPF NAVTFNTLLR GLFSENKVKD AVELFKKLVR EKICEPDVVT YATVMNGLSK RGHTQKTLSL
201: LRLMEQGNTE PNIYIYNIVI DALCKDGNLD AAINILNEMK QKDIHPDVLT YNSLIDGLCK LGQWEKVTSL FSEMVNLNIY PDVCIFNTLI DGLCKEGKVE
301: DAEEVMKHMV RKAVEPDIIT YNAIMDGYCL RGQVDRAKRI FDIMIDKGIK PNIFSYNILI NGYCMTKEVD DAMQLFCEIS QKGTKPDVVT YNTILQGLFK
401: VGKIVHARKF FAEMLSAGFI PDFYTHGIVI NGYFKNGLVE EALSLFNKLE GKREITDIEF YNVVINGLCN IGKLDEARAI FEKLSLIGLL PNVRTYNKMI
501: HGFCLEGLLD EANDMLRKMV ENGYLPNVFT YNALVQGFLR CRKITEMTTF MKEMTGRGFS FDATTTELLV NVLRESPSVL DMILDLHSKI MK
Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)
001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.