Factsheet for AT1G62910.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G63150.1	Thale cress	mitochondrion	84.02	84.42
AT1G63400.1	Thale cress	cytosol, plastid	76.42	83.71
AT1G63130.1	Thale cress	mitochondrion	83.23	83.49
AT1G62670.1	Thale cress	mitochondrion	81.49	81.75
AT1G62914.1	Thale cress	mitochondrion	68.2	81.63
AT1G63330.2	Thale cress	cytosol	72.15	81.57
AT1G62930.1	Thale cress	plastid	80.54	80.92
AT1G63080.3	Thale cress	mitochondrion	77.69	79.97
AT1G63070.1	Thale cress	mitochondrion	74.37	79.66
AT1G62590.1	Thale cress	mitochondrion	78.64	78.39
CDY34375	Canola	mitochondrion	59.81	73.11
CDY34688	Canola	cytosol	41.77	72.93
Bra027658.1-P	Field mustard	cytosol, mitochondrion	61.08	71.09
CDY25522	Canola	mitochondrion, plastid	44.15	62.42
AT1G62680.2	Thale cress	plastid	51.27	59.12
AT5G16640.1	Thale cress	mitochondrion	45.73	57.34
AT1G64580.1	Thale cress	mitochondrion	47.15	56.98
AT1G62720.1	Thale cress	mitochondrion	42.88	55.88
AT3G16710.1	Thale cress	mitochondrion	44.3	55.23
AT3G22470.1	Thale cress	cytosol, mitochondrion	52.69	53.8
AT1G12300.1	Thale cress	mitochondrion	53.8	53.38
AT1G12620.1	Thale cress	cytosol, mitochondrion	52.22	53.14
AT1G06580.1	Thale cress	mitochondrion	41.93	53.0
AT5G41170.1	Thale cress	mitochondrion	43.83	52.56
AT1G12775.1	Thale cress	cytosol, mitochondrion	53.16	52.17
AT1G12700.2	Thale cress	cytosol	48.89	50.0
AT1G64583.1	Thale cress	mitochondrion	40.51	50.0
AT4G26800.2	Thale cress	mitochondrion, plastid	38.45	47.28
VIT_12s0028g02320.t01	Wine grape	mitochondrion	32.91	43.61
VIT_14s0081g00270.t01	Wine grape	plastid	38.13	41.55
VIT_14s0081g00110.t01	Wine grape	cytosol	31.8	40.94
VIT_14s0081g00120.t01	Wine grape	plastid	37.03	40.14
Solyc06g007280.2.1	Tomato	cytosol	15.82	39.22
Solyc06g005220.2.1	Tomato	cytosol	25.16	39.16
PGSC0003DMT400052977	Potato	cytosol	23.58	38.3
PGSC0003DMT400008757	Potato	cytosol	30.06	38.15
KRH70370	Soybean	cytosol	32.75	38.05
AT1G64100.2	Thale cress	cytosol	48.1	37.72
PGSC0003DMT400008759	Potato	cytosol	18.83	37.3
PGSC0003DMT400025067	Potato	cytosol	28.01	37.18
PGSC0003DMT400025087	Potato	endoplasmic reticulum	29.11	37.17
Solyc06g007300.1.1	Tomato	extracellular	34.81	37.16
PGSC0003DMT400008760	Potato	mitochondrion	34.34	37.03
KRH75063	Soybean	mitochondrion, plastid	35.28	36.92
PGSC0003DMT400025074	Potato	cytosol	32.12	36.78
Solyc06g007740.1.1	Tomato	cytosol	34.18	36.61
KRH38755	Soybean	mitochondrion	34.34	36.53
KRH75045	Soybean	mitochondrion	34.49	36.52
KRH42744	Soybean	mitochondrion	35.28	36.5
KRH49698	Soybean	cytosol	32.91	36.49
KRH09256	Soybean	mitochondrion	32.12	36.31
KRH58843	Soybean	nucleus	34.97	36.17
VIT_14s0030g02280.t01	Wine grape	plastid	31.96	36.01
Solyc06g007810.1.1	Tomato	cytosol	15.19	35.82
PGSC0003DMT400052971	Potato	mitochondrion	33.23	35.41
VIT_14s0081g00280.t01	Wine grape	mitochondrion	35.6	35.21
PGSC0003DMT400056663	Potato	plastid	32.59	35.03
KRH75048	Soybean	mitochondrion	33.7	35.03
PGSC0003DMT400056665	Potato	mitochondrion	32.44	34.8
PGSC0003DMT400053185	Potato	mitochondrion	31.49	33.73
PGSC0003DMT400053556	Potato	mitochondrion	23.58	32.46
PGSC0003DMT400015293	Potato	mitochondrion	31.33	32.46
PGSC0003DMT400015298	Potato	mitochondrion	31.33	32.46
Zm00001d018982_P001	Maize	mitochondrion	17.72	32.0
PGSC0003DMT400053182	Potato	cytosol	30.22	31.89
VIT_14s0030g02260.t01	Wine grape	cytosol	22.15	31.6
Solyc04g080120.1.1	Tomato	extracellular	30.38	31.37
Os10t0495100-01	Rice	cytosol, mitochondrion	22.78	31.24
HORVU1Hr1G018190.2	Barley	cytosol	13.77	30.53
Os08t0248400-01	Rice	mitochondrion	21.04	30.23
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	15.35	29.85
OQU82832	Sorghum	cytosol	13.45	29.72
Os10t0499500-01	Rice	mitochondrion	23.73	29.64
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.92	29.63
Os10t0497432-01	Rice	mitochondrion	12.34	29.32
TraesCSU01G090200.1	Wheat	cytosol	19.94	28.51
TraesCS1A01G067700.1	Wheat	extracellular	15.19	28.49
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	11.39	28.46
Os10t0497366-00	Rice	mitochondrion	18.04	28.43
TraesCSU01G089700.1	Wheat	mitochondrion	21.68	28.42
HORVU6Hr1G017870.2	Barley	mitochondrion	13.45	28.33
TraesCSU01G089800.1	Wheat	mitochondrion	15.66	28.21
TraesCS6A01G015000.1	Wheat	mitochondrion	18.51	28.19
Os08t0107700-01	Rice	cytosol, mitochondrion	16.61	28.07
TraesCS2B01G126900.1	Wheat	cytosol	16.93	28.01
TraesCS6D01G083300.1	Wheat	mitochondrion	19.46	27.58
TraesCS6B01G127200.1	Wheat	cytosol	14.87	27.33
Os10t0501700-00	Rice	cytosol	19.62	27.31
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	16.3	27.25
OQU88594	Sorghum	cytosol	22.47	27.2
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	16.3	27.18
HORVU1Hr1G011250.1	Barley	cytosol	12.66	27.12
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	20.73	27.07
Os08t0107800-01	Rice	mitochondrion	26.11	26.44
KXG34536	Sorghum	mitochondrion	23.89	26.4
EER95949	Sorghum	mitochondrion	27.69	26.4
TraesCS6D01G083400.1	Wheat	mitochondrion	20.41	26.17
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	20.73	26.04
TraesCS1D01G058000.1	Wheat	cytosol	16.61	25.86
TraesCS6B01G127500.1	Wheat	cytosol	19.94	25.71
TraesCS6D01G076500.1	Wheat	plastid	18.35	25.61
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	20.41	25.24
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	18.99	24.95
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	17.25	24.83
TraesCS7D01G231400.1	Wheat	cytosol, plastid	15.82	24.81
TraesCS6D01G083100.1	Wheat	cytosol	19.15	24.69
Os10t0495200-01	Rice	mitochondrion	30.54	24.68
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	19.46	24.36
TraesCS1D01G068600.1	Wheat	plastid	12.97	24.12
TraesCS1A01G073800.1	Wheat	mitochondrion	12.66	24.02
EES07882	Sorghum	cytosol	29.43	23.94
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	27.06	23.92
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	16.3	23.79
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	26.9	23.78
TraesCS1B01G038200.1	Wheat	mitochondrion	23.58	23.54
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	26.58	23.53
TraesCS6B01G021600.1	Wheat	mitochondrion	26.58	23.46
TraesCS1B01G073200.1	Wheat	cytosol	11.23	23.43
TraesCS1B01G072300.1	Wheat	plastid	21.04	23.42
TraesCS1B01G315500.1	Wheat	mitochondrion	11.87	23.36
HORVU6Hr1G014310.1	Barley	mitochondrion	25.32	23.29
TraesCS6D01G047700.1	Wheat	mitochondrion	25.32	23.15
OQU82856	Sorghum	cytosol	27.53	23.14
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	17.56	23.12
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	12.5	23.1
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	26.11	23.08
EES09203	Sorghum	cytosol	29.11	23.06
Os10t0497300-01	Rice	mitochondrion	28.96	23.05
TraesCS7B01G469500.1	Wheat	cytosol	20.41	22.95
TraesCS1B01G072700.1	Wheat	cytosol	18.51	22.94
TraesCS6D01G017800.1	Wheat	cytosol	19.46	22.91
OQU82836	Sorghum	cytosol	22.15	22.88
TraesCS1B01G092600.1	Wheat	plastid	18.51	22.63
TraesCS1D01G057800.1	Wheat	mitochondrion	12.97	22.59
OQU82827	Sorghum	cytosol	28.48	22.58
OQU82823	Sorghum	cytosol	28.32	22.46
Zm00001d009733_P001	Maize	cytosol	27.85	22.14
KXG28799	Sorghum	plastid	26.58	22.11
KXG27690	Sorghum	cytosol, plastid	25.47	22.02
TraesCS1A01G031600.1	Wheat	cytosol	22.94	21.9
TraesCS1A01G074000.1	Wheat	mitochondrion	9.65	21.55
Os04t0349600-01	Rice	plastid	13.13	21.45
TraesCS1B01G086000.1	Wheat	plastid	23.26	21.43
OQU80148	Sorghum	mitochondrion	24.53	21.32
TraesCS1B01G072400.1	Wheat	cytosol	23.42	21.3
Zm00001d007555_P001	Maize	plastid	27.37	21.25
TraesCS1D01G058400.1	Wheat	cytosol	17.25	21.16
Zm00001d007548_P001	Maize	plastid	27.22	21.13
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.36	21.13
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	22.15	21.08
Zm00001d007559_P001	Maize	plastid	27.22	21.05
TraesCS6D01G290900.1	Wheat	mitochondrion	24.37	21.01
Zm00001d007531_P001	Maize	plastid	27.06	21.01
TraesCS6D01G017700.1	Wheat	plastid	17.72	20.97
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	26.11	20.97
TraesCS1A01G031700.1	Wheat	plastid	24.53	20.92
TraesCS1B01G038400.1	Wheat	cytosol	20.09	20.89
HORVU6Hr1G002890.6	Barley	cytosol, plastid	26.27	20.88
Zm00001d007534_P001	Maize	plastid	25.63	20.85
TraesCS6A01G083000.1	Wheat	cytosol	15.03	20.83
TraesCS2D01G532400.1	Wheat	cytosol	20.09	20.79
TraesCS2A01G531000.1	Wheat	golgi	22.31	20.77
TraesCS1D01G068500.1	Wheat	mitochondrion	26.58	20.69
TraesCS1B01G085900.1	Wheat	mitochondrion	26.58	20.64
TraesCS1A01G067600.1	Wheat	mitochondrion	26.42	20.54
TraesCS1A01G066600.1	Wheat	mitochondrion	8.54	20.53
TraesCS2D01G532600.1	Wheat	plastid	25.16	20.49
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	22.63	20.46
HORVU0Hr1G035310.1	Barley	cytosol	18.83	20.45
TraesCS1B01G085400.1	Wheat	cytosol	20.73	20.44
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	21.68	20.36
Os08t0110200-01	Rice	mitochondrion	25.63	20.3
TraesCS2D01G532500.1	Wheat	plastid	21.84	20.29
TraesCS2A01G530600.1	Wheat	cytosol	24.53	20.26
TraesCS1A01G054500.1	Wheat	mitochondrion	25.0	20.26
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	25.0	20.26
TraesCS1A01G067400.1	Wheat	mitochondrion	26.42	20.24
TraesCS1A01G055800.1	Wheat	mitochondrion	24.68	20.23
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	22.31	20.23
TraesCS1D01G068800.1	Wheat	plastid	26.11	20.22
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	21.04	20.18
HORVU6Hr1G076780.7	Barley	mitochondrion	26.27	20.15
TraesCS1B01G038500.1	Wheat	mitochondrion	25.16	20.13
TraesCS1D01G056200.1	Wheat	mitochondrion	26.27	20.12
TraesCS1A01G054700.2	Wheat	mitochondrion	25.79	20.07
TraesCS1B01G039700.1	Wheat	cytosol	19.3	20.07
OQU82831	Sorghum	cytosol	19.46	20.07
TraesCS1D01G068900.1	Wheat	mitochondrion	25.79	20.05
HORVU1Hr1G010970.1	Barley	mitochondrion	26.11	19.98
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	25.0	19.95
TraesCS1A01G054800.1	Wheat	cytosol	18.35	19.93
TraesCS1B01G039100.1	Wheat	mitochondrion	24.68	19.92
TraesCS1D01G055300.1	Wheat	cytosol	19.46	19.9
KXG35774	Sorghum	cytosol, mitochondrion	14.87	19.87
TraesCS2B01G560700.1	Wheat	plastid	24.21	19.84
TraesCS2A01G526200.1	Wheat	golgi	21.36	19.82
TraesCS1D01G068400.1	Wheat	mitochondrion	25.79	19.81
KXG19780	Sorghum	cytosol	18.51	19.8
TraesCS6B01G114300.1	Wheat	cytosol	12.18	19.79
TraesCS1D01G056700.1	Wheat	cytosol	18.99	19.77
HORVU0Hr1G031920.1	Barley	plastid	26.9	19.77
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	25.95	19.76
TraesCS1D01G069100.1	Wheat	mitochondrion	20.09	19.75
TraesCS1D01G076500.1	Wheat	mitochondrion	20.73	19.73
HORVU1Hr1G011160.2	Barley	cytosol, plastid	27.85	19.66
TraesCS1B01G039200.1	Wheat	mitochondrion	24.37	19.64
HORVU1Hr1G014040.1	Barley	mitochondrion	25.79	19.57
TraesCS2D01G532300.1	Wheat	plastid	24.05	19.54
TraesCS2D01G532100.1	Wheat	mitochondrion	21.36	19.51
TraesCS1B01G072900.2	Wheat	mitochondrion	26.9	19.47
HORVU1Hr1G004750.6	Barley	plastid	24.53	19.42
TraesCS6A01G311600.1	Wheat	mitochondrion	25.63	19.38
HORVU1Hr1G010890.5	Barley	cytosol	27.53	19.38
TraesCS1A01G055500.1	Wheat	mitochondrion	6.65	19.35
TraesCS1B01G073100.1	Wheat	cytosol	18.51	19.31
TraesCS1D01G056600.1	Wheat	mitochondrion	6.17	19.31
TraesCS1B01G092500.1	Wheat	mitochondrion	23.89	19.28
TraesCS1B01G075300.1	Wheat	cytosol	18.2	19.26
TraesCS1B01G071600.1	Wheat	mitochondrion	25.79	19.22
HORVU1Hr1G011150.1	Barley	cytosol, plastid	26.58	19.03
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	21.52	18.97
TraesCS1A01G057300.1	Wheat	cytosol	21.52	18.94
TraesCS1B01G085300.1	Wheat	mitochondrion	23.73	18.94
TraesCS1D01G076900.1	Wheat	plastid	19.46	18.72
TraesCS1A01G067000.1	Wheat	mitochondrion	21.2	18.72
TraesCS1A01G073600.1	Wheat	mitochondrion	11.55	18.62
HORVU1Hr1G011300.3	Barley	plastid	27.06	18.59
HORVU1Hr1G014060.1	Barley	plastid	26.11	18.54
HORVU1Hr1G013810.1	Barley	plastid	24.37	18.36
TraesCS2B01G560300.1	Wheat	cytosol	16.46	18.28
TraesCS6A01G014600.1	Wheat	cytosol	11.39	18.23
TraesCS2A01G531100.1	Wheat	cytosol	16.3	18.1
TraesCS2B01G559900.1	Wheat	cytosol	15.51	18.08
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	6.49	17.98
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	21.68	17.89
TraesCS6B01G129100.1	Wheat	cytosol, plastid	8.07	17.71
Zm00001d009735_P001	Maize	cytosol	27.06	17.57
OQU82834	Sorghum	cytosol	26.58	17.45
TraesCS1D01G058500.1	Wheat	plastid	15.66	17.37
TraesCS1D01G076400.1	Wheat	cytosol	9.81	17.08
TraesCS1D01G068700.1	Wheat	cytosol	11.71	16.86
HORVU1Hr1G011400.44	Barley	plastid	16.14	16.56
Os04t0351333-00	Rice	cytosol	21.99	15.81
TraesCS1B01G084800.1	Wheat	cytosol	11.23	15.3
TraesCS6B01G341800.2	Wheat	cytosol	9.49	15.04
TraesCS1B01G038300.1	Wheat	plastid	12.97	15.02
TraesCS1D01G033000.1	Wheat	cytosol	9.49	14.85
TraesCS1A01G073700.1	Wheat	cytosol	9.02	14.81
OQU82833	Sorghum	cytosol	10.44	14.73
TraesCS1A01G056000.1	Wheat	cytosol	9.34	14.68
TraesCS1D01G076700.1	Wheat	cytosol	7.59	14.37
TraesCS1B01G038600.1	Wheat	cytosol	8.07	14.05
TraesCS1D01G067600.1	Wheat	cytosol	7.91	13.7
TraesCS1A01G067800.1	Wheat	cytosol	7.91	13.37
OQU88581	Sorghum	cytosol	20.25	11.78
TraesCS1A01G055600.1	Wheat	cytosol	6.01	11.69
TraesCS1D01G057700.1	Wheat	cytosol	5.85	11.38
TraesCS2D01G532200.1	Wheat	cytosol	4.59	9.9

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:842592	ProteinID:AAF75801.1	ProteinID:AEE34020.1	ArrayExpress:AT1G62910
EnsemblPlantsGene:AT1G62910	RefSeq:AT1G62910	TAIR:AT1G62910	RefSeq:AT1G62910-TAIR-G	EnsemblPlants:AT1G62910.1	TAIR:AT1G62910.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006139	GO:GO:0006397	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0080156	GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	RefSeq:NP_176479.2
PFAM:PF12854	PFAM:PF13041	PO:PO:0001078	PO:PO:0007611	PO:PO:0009010	PO:PO:0009031
PO:PO:0009047	PFscan:PS51375	PANTHER:PTHR44149	PANTHER:PTHR44149:SF3	InterPro:Pentatricopeptide_repeat	UniProt:Q9LQ16
SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000A3BA5	SEG:seg	:

Description

Pentatricopeptide repeat-containing protein At1g62910 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ16]

Coordinates

chr1:+:23298948..23301141

Molecular Weight (calculated)

70987.5 Da

IEP (calculated)

6.858

GRAVY (calculated)

-0.038

Length

632 amino acids

Sequence
(BLAST)

001: MQRSISLTAK RLFVHWNLQG IGNPPTVPSF FNLCGSGCWE RSFASASGDY REILRNRLSD IIKVDDAVDL FGDMVKSRPF PSIVEFNKLL SAVAKMNKFE
101: LVISLGEQMQ TLGISHDLYT YSIFINCFCR RSQLSLALAV LAKMMKLGYE PDIVTLSSLL NGYCHSKRIS DAVALVDQMV EMGYKPDTFT FTTLIHGLFL
201: HNKASEAVAL VDQMVQRGCQ PDLVTYGTVV NGLCKRGDID LALSLLKKME KGKIEADVVI YNTIIDGLCK YKHMDDALNL FTEMDNKGIR PDVFTYSSLI
301: SCLCNYGRWS DASRLLSDMI ERKINPNVVT FSALIDAFVK EGKLVEAEKL YDEMIKRSID PDIFTYSSLI NGFCMHDRLD EAKHMFELMI SKDCFPNVVT
401: YSTLIKGFCK AKRVEEGMEL FREMSQRGLV GNTVTYTTLI HGFFQARDCD NAQMVFKQMV SVGVHPNILT YNILLDGLCK NGKLAKAMVV FEYLQRSTME
501: PDIYTYNIMI EGMCKAGKVE DGWELFCNLS LKGVSPNVIA YNTMISGFCR KGSKEEADSL LKKMKEDGPL PNSGTYNTLI RARLRDGDRE ASAELIKEMR
601: SCGFAGDAST IGLVTNMLHD GRLDKSFLDM LS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.