Factsheet for PGSC0003DMT400053185

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	PGSC0003DMT400037344	AT4G26630.1	25387881
AT1G62670.1	PGSC0003DMT400057390	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400053182	Potato	cytosol	85.59	84.31
Solyc06g007740.1.1	Tomato	cytosol	82.88	82.88
PGSC0003DMT400052971	Potato	mitochondrion	75.93	75.55
PGSC0003DMT400052977	Potato	cytosol	49.49	75.06
PGSC0003DMT400025074	Potato	cytosol	70.0	74.82
PGSC0003DMT400008757	Potato	cytosol	62.54	74.1
PGSC0003DMT400025087	Potato	endoplasmic reticulum	62.03	73.94
PGSC0003DMT400056665	Potato	mitochondrion	73.05	73.17
PGSC0003DMT400056663	Potato	plastid	72.71	72.96
PGSC0003DMT400025067	Potato	cytosol	58.14	72.06
PGSC0003DMT400008759	Potato	cytosol	38.64	71.47
PGSC0003DMT400008760	Potato	mitochondrion	69.32	69.8
PGSC0003DMT400053556	Potato	mitochondrion	53.56	68.85
PGSC0003DMT400015293	Potato	mitochondrion	51.69	50.0
PGSC0003DMT400015298	Potato	mitochondrion	51.69	50.0
VIT_12s0028g02320.t01	Wine grape	mitochondrion	33.39	41.3
VIT_14s0081g00270.t01	Wine grape	plastid	38.47	39.14
VIT_14s0081g00120.t01	Wine grape	plastid	38.64	39.11
VIT_14s0081g00110.t01	Wine grape	cytosol	31.86	38.29
VIT_14s0081g00280.t01	Wine grape	mitochondrion	39.49	36.46
Bra027636.1-P	Field mustard	cytosol	20.0	36.42
CDY09968	Canola	cytosol	18.14	36.39
KRH70370	Soybean	cytosol	33.22	36.03
CDY16110	Canola	extracellular	24.75	35.61
CDY06217	Canola	cytosol	17.63	35.49
CDY51169	Canola	cytosol	25.25	35.22
Bra026958.1-P	Field mustard	mitochondrion	37.63	34.85
CDY00489	Canola	mitochondrion	34.58	34.81
CDY26589	Canola	cytosol	4.07	34.78
CDY33797	Canola	mitochondrion	30.17	34.77
KRH09256	Soybean	mitochondrion	32.88	34.7
CDY31272	Canola	mitochondrion	33.39	34.68
VIT_14s0030g02280.t01	Wine grape	plastid	32.88	34.58
CDY03257	Canola	cytosol	22.88	34.53
CDY39810	Canola	cytosol	22.88	34.53
KRH38755	Soybean	mitochondrion	34.75	34.51
Bra026882.1-P	Field mustard	cytosol	31.19	34.46
AT5G16640.1	Thale cress	mitochondrion	29.32	34.33
Bra036649.1-P	Field mustard	cytosol	22.71	34.27
KRH58843	Soybean	nucleus	35.42	34.21
Bra027029.1-P	Field mustard	mitochondrion	14.07	34.16
AT1G12700.2	Thale cress	cytosol	35.76	34.14
CDX71969	Canola	cytosol	22.88	34.09
KRH49698	Soybean	cytosol	32.71	33.86
Bra031731.1-P	Field mustard	mitochondrion	29.15	33.86
CDX67634	Canola	cytosol	24.24	33.81
Bra026957.1-P	Field mustard	mitochondrion	34.41	33.66
KRH75063	Soybean	mitochondrion, plastid	34.41	33.61
AT3G22470.1	Thale cress	cytosol, mitochondrion	35.25	33.6
KRH42744	Soybean	mitochondrion	34.75	33.55
Bra026884.1-P	Field mustard	cytosol	26.1	33.55
AT1G12620.1	Thale cress	cytosol, mitochondrion	35.25	33.49
CDY26607	Canola	cytosol	25.93	33.48
CDY34870	Canola	mitochondrion	16.27	33.45
CDY16031	Canola	cytosol	17.63	33.44
CDY65983	Canola	mitochondrion	23.9	33.41
AT1G62720.1	Thale cress	mitochondrion	27.46	33.4
KRH75048	Soybean	mitochondrion	34.41	33.39
Bra028267.1-P	Field mustard	mitochondrion	35.42	33.39
AT1G63130.1	Thale cress	mitochondrion	35.59	33.33
KRH75045	Soybean	mitochondrion	33.73	33.33
CDY08386	Canola	cytosol	25.08	33.26
CDY26565	Canola	mitochondrion	32.03	33.22
AT1G62670.1	Thale cress	mitochondrion	35.42	33.17
AT1G64583.1	Thale cress	mitochondrion	28.64	33.01
Bra006187.1-P	Field mustard	plastid	16.27	32.99
CDX69436	Canola	plastid	27.8	32.93
AT1G12300.1	Thale cress	mitochondrion	35.42	32.81
CDY34969	Canola	mitochondrion	28.14	32.81
CDY25492	Canola	mitochondrion	27.29	32.79
Bra021192.1-P	Field mustard	plastid	27.97	32.74
AT1G63330.2	Thale cress	cytosol	31.02	32.74
CDY34375	Canola	mitochondrion	28.64	32.69
Bra026971.1-P	Field mustard	mitochondrion	34.75	32.59
AT1G62930.1	Thale cress	plastid	34.58	32.43
CDY26588	Canola	extracellular	17.8	32.41
CDY34688	Canola	cytosol	19.83	32.32
AT1G63080.3	Thale cress	mitochondrion	33.56	32.25
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	30.0	32.24
CDY46909	Canola	mitochondrion	15.93	32.19
CDY26593	Canola	cytosol	33.22	32.18
CDY16002	Canola	cytosol	16.95	32.15
AT3G16710.1	Thale cress	mitochondrion	27.63	32.15
Bra016762.1-P	Field mustard	mitochondrion	33.05	32.13
CDY68929	Canola	mitochondrion	33.05	32.13
AT1G63070.1	Thale cress	mitochondrion	32.03	32.03
AT1G06580.1	Thale cress	mitochondrion	27.12	32.0
CDY46912	Canola	mitochondrion	26.78	31.98
Bra027026.1-P	Field mustard	mitochondrion	28.31	31.93
Bra026954.1-P	Field mustard	mitochondrion	35.08	31.85
AT1G12775.1	Thale cress	cytosol, mitochondrion	34.75	31.83
Bra025516.1-P	Field mustard	cytosol, mitochondrion	25.59	31.66
AT1G62680.2	Thale cress	plastid	29.32	31.57
AT1G62910.1	Thale cress	mitochondrion	33.73	31.49
CDY16033	Canola	cytosol	7.97	31.33
AT1G63150.1	Thale cress	mitochondrion	33.39	31.32
AT1G63400.1	Thale cress	cytosol, plastid	30.51	31.2
CDY46394	Canola	mitochondrion	25.42	31.18
Bra026836.1-P	Field mustard	cytosol, mitochondrion	25.93	31.16
CDY49646	Canola	mitochondrion	26.44	31.14
Bra027658.1-P	Field mustard	cytosol, mitochondrion	28.64	31.12
CDY33753	Canola	mitochondrion	23.39	31.08
CDY48949	Canola	mitochondrion	25.25	30.98
AT1G64580.1	Thale cress	mitochondrion	27.46	30.98
VIT_14s0030g02260.t01	Wine grape	cytosol	23.22	30.93
CDY31271	Canola	mitochondrion	25.42	30.86
Bra036651.1-P	Field mustard	mitochondrion	27.97	30.84
AT1G62914.1	Thale cress	mitochondrion	27.46	30.68
AT1G62590.1	Thale cress	mitochondrion	32.88	30.6
CDY35831	Canola	mitochondrion	26.44	30.29
CDY66358	Canola	mitochondrion	19.83	30.0
AT5G41170.1	Thale cress	mitochondrion	26.61	29.79
CDY16032	Canola	mitochondrion	20.51	29.66
CDY47835	Canola	mitochondrion	21.86	29.52
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.75	29.29
Bra027726.1-P	Field mustard	mitochondrion	23.22	29.09
TraesCS1A01G067700.1	Wheat	extracellular	16.61	29.08
CDY16003	Canola	cytosol, plastid	19.15	28.9
CDY25522	Canola	mitochondrion, plastid	21.86	28.86
CDY28348	Canola	mitochondrion, plastid	28.98	28.6
TraesCS2B01G126900.1	Wheat	cytosol	18.14	28.01
AT4G26800.2	Thale cress	mitochondrion, plastid	23.73	27.24
CDY25519	Canola	mitochondrion, plastid	29.49	27.23
Zm00001d018982_P001	Maize	mitochondrion	16.1	27.14
CDX68680	Canola	mitochondrion	21.02	26.84
HORVU1Hr1G018190.2	Barley	cytosol	12.88	26.67
Os10t0501700-00	Rice	cytosol	20.51	26.65
TraesCS6B01G127200.1	Wheat	cytosol	15.42	26.45
HORVU1Hr1G011250.1	Barley	cytosol	13.22	26.44
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	16.61	25.93
TraesCS1D01G058000.1	Wheat	cytosol	17.8	25.86
HORVU6Hr1G017870.2	Barley	mitochondrion	13.05	25.67
Os10t0495100-01	Rice	cytosol, mitochondrion	20.0	25.6
TraesCS6A01G015000.1	Wheat	mitochondrion	17.8	25.3
CDY29251	Canola	mitochondrion	21.69	25.25
CDX89301	Canola	plastid	22.71	25.05
TraesCS6D01G083300.1	Wheat	mitochondrion	18.81	24.89
Bra026401.1-P	Field mustard	plastid	22.54	24.86
TraesCSU01G089800.1	Wheat	mitochondrion	14.75	24.79
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	21.02	24.65
Os08t0248400-01	Rice	mitochondrion	18.31	24.55
TraesCSU01G090200.1	Wheat	cytosol	18.31	24.43
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	20.0	24.38
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	18.14	24.37
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	21.02	24.27
TraesCS1D01G068600.1	Wheat	plastid	13.9	24.12
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	13.22	24.0
TraesCS6D01G083100.1	Wheat	cytosol	19.83	23.88
TraesCSU01G089700.1	Wheat	mitochondrion	19.49	23.86
Os10t0497366-00	Rice	mitochondrion	16.1	23.69
TraesCS6D01G076500.1	Wheat	plastid	18.14	23.62
AT1G64100.2	Thale cress	cytosol	32.2	23.57
TraesCS7D01G231400.1	Wheat	cytosol, plastid	16.1	23.57
TraesCS6B01G127500.1	Wheat	cytosol	19.49	23.47
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	20.0	23.37
CDY66357	Canola	cytosol	14.92	23.22
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	14.92	23.22
Os10t0499500-01	Rice	mitochondrion	19.83	23.12
TraesCS6D01G017800.1	Wheat	cytosol	21.02	23.09
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	18.81	23.08
TraesCS6D01G083400.1	Wheat	mitochondrion	19.15	22.92
TraesCS1D01G058400.1	Wheat	cytosol	20.0	22.91
OQU82832	Sorghum	cytosol	11.02	22.73
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	16.61	22.63
TraesCS1B01G072700.1	Wheat	cytosol	19.49	22.55
TraesCS1B01G038200.1	Wheat	mitochondrion	24.07	22.43
TraesCS7B01G469500.1	Wheat	cytosol	21.36	22.42
TraesCS6B01G021600.1	Wheat	mitochondrion	27.12	22.35
TraesCS1B01G315500.1	Wheat	mitochondrion	12.03	22.12
TraesCS6A01G083000.1	Wheat	cytosol	16.95	21.93
HORVU6Hr1G014310.1	Barley	mitochondrion	25.42	21.83
OQU88594	Sorghum	cytosol	19.15	21.65
KXG34536	Sorghum	mitochondrion	20.85	21.5
TraesCS1D01G057800.1	Wheat	mitochondrion	13.22	21.49
TraesCS1B01G092600.1	Wheat	plastid	18.81	21.47
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	17.46	21.46
TraesCS1B01G073200.1	Wheat	cytosol	11.02	21.45
CDY34370	Canola	cytosol	29.83	21.44
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	25.93	21.43
Os08t0107700-01	Rice	cytosol, mitochondrion	13.56	21.39
TraesCS1D01G055300.1	Wheat	cytosol	22.37	21.36
TraesCS1D01G056700.1	Wheat	cytosol	21.86	21.25
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	23.9	21.23
TraesCS1B01G085400.1	Wheat	cytosol	23.05	21.22
TraesCS1D01G068900.1	Wheat	mitochondrion	29.15	21.16
Os08t0107800-01	Rice	mitochondrion	22.37	21.15
TraesCS1B01G086000.1	Wheat	plastid	24.58	21.14
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	25.59	21.12
TraesCS1A01G073800.1	Wheat	mitochondrion	11.86	21.02
CDX81633	Canola	extracellular, golgi, plasma membrane	32.37	21.01
TraesCS6D01G290900.1	Wheat	mitochondrion	26.1	21.01
TraesCS1B01G073100.1	Wheat	cytosol	21.53	20.96
TraesCS1B01G072300.1	Wheat	plastid	20.17	20.95
EER95949	Sorghum	mitochondrion	23.39	20.81
TraesCS6D01G017700.1	Wheat	plastid	18.81	20.79
TraesCS6D01G047700.1	Wheat	mitochondrion	24.24	20.69
TraesCS1A01G031700.1	Wheat	plastid	25.93	20.65
TraesCS1A01G054800.1	Wheat	cytosol	20.34	20.62
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	24.92	20.56
TraesCS1B01G038400.1	Wheat	cytosol	21.19	20.56
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	8.81	20.55
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	23.39	20.51
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	11.86	20.47
HORVU0Hr1G035310.1	Barley	cytosol	20.17	20.45
TraesCS1D01G068500.1	Wheat	mitochondrion	28.14	20.44
TraesCS2B01G560300.1	Wheat	cytosol	19.66	20.39
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	22.71	20.33
TraesCS2A01G531000.1	Wheat	golgi	23.39	20.32
EES09203	Sorghum	cytosol	27.46	20.3
TraesCS1B01G085900.1	Wheat	mitochondrion	27.97	20.27
CDY15970	Canola	cytosol	3.22	20.21
TraesCS1A01G067600.1	Wheat	mitochondrion	27.8	20.17
TraesCS2D01G532500.1	Wheat	plastid	23.22	20.15
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	24.41	20.14
TraesCS1A01G067400.1	Wheat	mitochondrion	28.14	20.12
TraesCS2B01G559900.1	Wheat	cytosol	18.47	20.11
TraesCS1A01G031600.1	Wheat	cytosol	22.54	20.09
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	23.73	20.09
TraesCS1D01G068400.1	Wheat	mitochondrion	27.97	20.05
TraesCS1A01G067000.1	Wheat	mitochondrion	24.24	19.97
TraesCS2A01G526200.1	Wheat	golgi	23.05	19.97
TraesCS1D01G069100.1	Wheat	mitochondrion	21.69	19.91
Zm00001d009733_P001	Maize	cytosol	26.78	19.87
TraesCS1B01G085300.1	Wheat	mitochondrion	26.61	19.82
Os10t0495200-01	Rice	mitochondrion	26.27	19.82
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	27.8	19.76
KXG35774	Sorghum	cytosol, mitochondrion	15.76	19.66
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	23.22	19.6
TraesCS1B01G075300.1	Wheat	cytosol	19.83	19.6
TraesCS2D01G532300.1	Wheat	plastid	25.76	19.54
TraesCS2D01G532100.1	Wheat	mitochondrion	22.88	19.51
TraesCS1B01G038500.1	Wheat	mitochondrion	26.1	19.49
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	25.76	19.49
OQU82823	Sorghum	cytosol	26.27	19.45
EES07882	Sorghum	cytosol	25.59	19.43
Zm00001d007534_P001	Maize	plastid	25.59	19.43
TraesCS1B01G072400.1	Wheat	cytosol	22.88	19.42
OQU82831	Sorghum	cytosol	20.17	19.41
TraesCS1B01G039700.1	Wheat	cytosol	20.0	19.41
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.02	19.41
Os10t0497300-01	Rice	mitochondrion	26.1	19.4
TraesCS1D01G068800.1	Wheat	plastid	26.78	19.36
TraesCS2A01G531100.1	Wheat	cytosol	18.64	19.33
KXG27690	Sorghum	cytosol, plastid	23.9	19.29
TraesCS1B01G039100.1	Wheat	mitochondrion	25.59	19.28
KXG28799	Sorghum	plastid	24.75	19.21
Zm00001d007531_P001	Maize	plastid	26.44	19.16
TraesCS1D01G056200.1	Wheat	mitochondrion	26.78	19.15
TraesCS2D01G532400.1	Wheat	cytosol	19.83	19.15
TraesCS1D01G076500.1	Wheat	mitochondrion	21.53	19.13
Os04t0349600-01	Rice	plastid	12.54	19.12
TraesCS1A01G054700.2	Wheat	mitochondrion	26.27	19.09
OQU82827	Sorghum	cytosol	25.76	19.07
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	25.59	19.07
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	25.42	19.06
HORVU6Hr1G076780.7	Barley	mitochondrion	26.61	19.05
TraesCS6A01G311600.1	Wheat	mitochondrion	26.95	19.02
TraesCS1B01G071600.1	Wheat	mitochondrion	27.29	18.99
HORVU1Hr1G013810.1	Barley	plastid	26.95	18.95
TraesCS1A01G057300.1	Wheat	cytosol	23.05	18.94
Zm00001d007555_P001	Maize	plastid	26.1	18.92
Bra027656.1-P	Field mustard	cytosol	30.17	18.92
OQU82856	Sorghum	cytosol	24.07	18.88
TraesCS2D01G532600.1	Wheat	plastid	24.75	18.81
TraesCS2B01G560700.1	Wheat	plastid	24.58	18.81
Os10t0497432-01	Rice	mitochondrion	8.47	18.8
TraesCS6B01G114300.1	Wheat	cytosol	12.37	18.77
HORVU6Hr1G002890.6	Barley	cytosol, plastid	25.25	18.74
HORVU1Hr1G004750.6	Barley	plastid	25.25	18.67
Zm00001d007548_P001	Maize	plastid	25.59	18.55
TraesCS1B01G039200.1	Wheat	mitochondrion	24.58	18.49
HORVU1Hr1G014040.1	Barley	mitochondrion	26.1	18.49
Zm00001d007559_P001	Maize	plastid	25.59	18.48
TraesCS6A01G014600.1	Wheat	cytosol	12.37	18.48
TraesCS1B01G072900.2	Wheat	mitochondrion	27.29	18.44
OQU80148	Sorghum	mitochondrion	22.71	18.43
TraesCS1B01G092500.1	Wheat	mitochondrion	24.41	18.39
OQU82836	Sorghum	cytosol	18.98	18.3
TraesCS2A01G530600.1	Wheat	cytosol	23.73	18.3
HORVU0Hr1G031920.1	Barley	plastid	26.61	18.26
HORVU1Hr1G010970.1	Barley	mitochondrion	25.42	18.16
TraesCS1A01G054500.1	Wheat	mitochondrion	23.9	18.08
TraesCS1A01G055800.1	Wheat	mitochondrion	23.22	17.77
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	23.05	17.75
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	21.53	17.71
HORVU1Hr1G011150.1	Barley	cytosol, plastid	26.44	17.67
TraesCS1D01G076900.1	Wheat	plastid	19.66	17.66
KXG19780	Sorghum	cytosol	17.63	17.6
Bra016758.1-P	Field mustard	plastid	34.41	17.52
TraesCS1B01G084800.1	Wheat	cytosol	13.73	17.46
HORVU1Hr1G014060.1	Barley	plastid	26.27	17.42
TraesCS1A01G073700.1	Wheat	cytosol	11.36	17.4
HORVU1Hr1G011160.2	Barley	cytosol, plastid	26.27	17.32
HORVU1Hr1G010890.5	Barley	cytosol	26.27	17.26
Os08t0110200-01	Rice	mitochondrion	22.71	16.79
HORVU1Hr1G011300.3	Barley	plastid	26.1	16.74
CDY31277	Canola	plastid	27.12	16.68
TraesCS1A01G073600.1	Wheat	mitochondrion	11.02	16.58
TraesCS1D01G068700.1	Wheat	cytosol	12.2	16.4
Zm00001d009735_P001	Maize	cytosol	26.44	16.03
TraesCS1D01G056600.1	Wheat	mitochondrion	5.42	15.84
TraesCS1D01G058500.1	Wheat	plastid	14.58	15.09
TraesCS6B01G341800.2	Wheat	cytosol	10.17	15.04
HORVU1Hr1G011400.44	Barley	plastid	15.59	14.94
Os04t0351333-00	Rice	cytosol	22.2	14.9
TraesCS1A01G055500.1	Wheat	mitochondrion	5.42	14.75
OQU82833	Sorghum	cytosol	11.19	14.73
TraesCS1A01G056000.1	Wheat	cytosol	10.0	14.68
TraesCS1D01G076700.1	Wheat	cytosol	8.31	14.67
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	5.59	14.47
TraesCS6B01G129100.1	Wheat	cytosol, plastid	6.95	14.24
OQU82834	Sorghum	cytosol	23.05	14.12
TraesCS1D01G033000.1	Wheat	cytosol	9.49	13.86
TraesCS1A01G074000.1	Wheat	mitochondrion	6.61	13.78
TraesCS1D01G076400.1	Wheat	cytosol	8.31	13.5
TraesCS1D01G067600.1	Wheat	cytosol	8.31	13.42
TraesCS1A01G066600.1	Wheat	mitochondrion	5.93	13.31
CDY34680	Canola	cytosol	19.15	12.39
TraesCS1A01G067800.1	Wheat	cytosol	7.8	12.3
TraesCS1B01G038600.1	Wheat	cytosol	7.46	12.12
TraesCS1B01G038300.1	Wheat	plastid	11.19	12.09
TraesCS1A01G055600.1	Wheat	cytosol	6.44	11.69
TraesCS1D01G057700.1	Wheat	cytosol	6.44	11.69
TraesCS2D01G532200.1	Wheat	cytosol	5.76	11.6
OQU88581	Sorghum	cytosol	19.83	10.76
CDY21063	Canola	plastid	1.86	2.0

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:102588542	MapMan:35.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	UniProt:M1BUJ6	PFAM:PF01535	PFAM:PF13041	EnsemblPlantsGene:PGSC0003DMG400020644
PGSC:PGSC0003DMG400020644	EnsemblPlants:PGSC0003DMT400053185	PFscan:PS51375	PANTHER:PTHR44149	PANTHER:PTHR44149:SF3	InterPro:Pentatricopeptide_repeat
SUPFAM:SSF48452	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000296EDE8	RefSeq:XP_006344105.1	RefSeq:XP_015162699.1
RefSeq:XP_015162700.1	RefSeq:XP_015162701.1	:	:	:	:

Description

PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020644]

Coordinates

chr6:-:2530593..2532532

Molecular Weight (calculated)

66988.3 Da

IEP (calculated)

8.851

GRAVY (calculated)

-0.054

Length

590 amino acids

Sequence
(BLAST)

001: MRRISLRNCN GIPFISSISG SAFTIRAYSS CRYSKKSISV MDKFGVNSSN LDDAVTLFHQ MVTMKPLPSV VHFSQLFKTM IKMKHYSGAL SLFRQMLKLG
101: IPISDFILNI MINSYCLMYR VDCAFSVLPI YLKNGIPFNT VTFNTLLKGI FAQNKVKDAV ELFKKLVRDK ICEPDEVMYA IVMNGLSKRG HTQKTLSLLR
201: LMEQGNTEPT IYIYSIVIDA LCKDGNLDAA INILNEMKQK DIPPDIVTYN SIIDGLCKFG QWEKVTSLFY EMVNLNIYPD VHTLNIITDG LCKEGKVKDA
301: EEVMKHMVEK GVEPNTITYN ALMDGYCLRG QLDRARRIFS IMIDKGIETD IISYNVLIKG YCKKKKVDEA MQLFCEISQK GSKPDNFTYN TILQGLFEVG
401: RTGDAKQIYA EMLTAGTKPD IYIHVTLLNG YYKYGLVEEA MALVNKLERN KEYTNIAFYR VVINGLCKNG KLNKAHAVFK KLSFIGLLPD VRTYTIMING
501: FCFEGLFDEA KYILRKMEDN GCSPNNVTYN VIVQGFLRCN KISEMASFMK EMDGRGFSFD ATTTGFLIDV VRENPSVLDM IPELHSKNKK

Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)

001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS

Arabidopsis Description

ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.