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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 5
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 72.06 83.61
Bra026882.1-P Field mustard cytosol 66.72 79.59
Bra028267.1-P Field mustard mitochondrion 75.51 76.84
Bra026971.1-P Field mustard mitochondrion 75.67 76.63
Bra026884.1-P Field mustard cytosol 55.1 76.47
Bra026836.1-P Field mustard cytosol, mitochondrion 57.46 74.54
Bra031731.1-P Field mustard mitochondrion 59.18 74.21
Bra026954.1-P Field mustard mitochondrion 74.41 72.92
Bra016762.1-P Field mustard mitochondrion 68.6 71.99
AT1G12300.1 Thale cress mitochondrion 71.43 71.43
AT1G12620.1 Thale cress cytosol, mitochondrion 69.39 71.18
AT3G22470.1 Thale cress cytosol, mitochondrion 65.31 67.21
AT1G12775.1 Thale cress cytosol, mitochondrion 67.66 66.93
Bra026957.1-P Field mustard mitochondrion 58.4 61.69
Bra027029.1-P Field mustard mitochondrion 20.25 53.09
Bra027658.1-P Field mustard cytosol, mitochondrion 44.9 52.67
Bra036649.1-P Field mustard cytosol 32.03 52.17
Bra027636.1-P Field mustard cytosol 25.59 50.31
Bra006187.1-P Field mustard plastid 22.92 50.17
Bra036651.1-P Field mustard mitochondrion 40.97 48.78
VIT_12s0028g02320.t01 Wine grape mitochondrion 36.42 48.64
Bra027026.1-P Field mustard mitochondrion 39.4 47.99
Bra025516.1-P Field mustard cytosol, mitochondrion 35.48 47.38
Bra027726.1-P Field mustard mitochondrion 35.01 47.35
Bra021192.1-P Field mustard plastid 36.11 45.63
VIT_14s0081g00270.t01 Wine grape plastid 40.35 44.31
VIT_14s0081g00110.t01 Wine grape cytosol 33.28 43.18
Solyc06g007810.1.1 Tomato cytosol 17.74 42.16
VIT_14s0081g00120.t01 Wine grape plastid 38.3 41.85
PGSC0003DMT400008759 Potato cytosol 20.88 41.69
Solyc06g005220.2.1 Tomato cytosol 26.53 41.63
PGSC0003DMT400008757 Potato cytosol 32.5 41.57
Solyc06g007280.2.1 Tomato cytosol 16.17 40.39
KRH70370 Soybean cytosol 34.38 40.26
PGSC0003DMT400008760 Potato mitochondrion 36.58 39.76
KRH49698 Soybean cytosol 35.48 39.65
PGSC0003DMT400052977 Potato cytosol 24.02 39.33
PGSC0003DMT400025074 Potato cytosol 33.91 39.13
Bra026401.1-P Field mustard plastid 32.5 38.69
Solyc06g007740.1.1 Tomato cytosol 35.79 38.64
KRH42744 Soybean mitochondrion 37.05 38.63
KRH58843 Soybean nucleus 37.05 38.63
PGSC0003DMT400056665 Potato mitochondrion 35.64 38.54
Bra016758.1-P Field mustard plastid 70.02 38.48
PGSC0003DMT400025087 Potato endoplasmic reticulum 29.83 38.38
KRH75045 Soybean mitochondrion 35.95 38.36
VIT_14s0081g00280.t01 Wine grape mitochondrion 38.46 38.34
Solyc06g007300.1.1 Tomato extracellular 35.32 38.01
VIT_14s0030g02280.t01 Wine grape plastid 33.44 37.97
KRH75048 Soybean mitochondrion 36.11 37.83
KRH75063 Soybean mitochondrion, plastid 35.79 37.75
PGSC0003DMT400053185 Potato mitochondrion 34.85 37.63
PGSC0003DMT400052971 Potato mitochondrion 34.85 37.44
PGSC0003DMT400056663 Potato plastid 34.54 37.41
PGSC0003DMT400025067 Potato cytosol 27.94 37.4
KRH09256 Soybean mitochondrion 32.5 37.03
PGSC0003DMT400053556 Potato mitochondrion 26.53 36.82
KRH38755 Soybean mitochondrion 34.07 36.53
PGSC0003DMT400053182 Potato cytosol 33.75 35.89
PGSC0003DMT400015293 Potato mitochondrion 32.34 33.77
PGSC0003DMT400015298 Potato mitochondrion 32.34 33.77
Solyc04g080120.1.1 Tomato extracellular 32.18 33.5
VIT_14s0030g02260.t01 Wine grape cytosol 23.23 33.41
Zm00001d018982_P001 Maize mitochondrion 16.95 30.86
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 14.13 30.3
TraesCS1A01G067700.1 Wheat extracellular 15.86 29.97
Os10t0495100-01 Rice cytosol, mitochondrion 21.66 29.93
HORVU1Hr1G018190.2 Barley cytosol 13.34 29.82
TraesCS6B01G127200.1 Wheat cytosol 16.01 29.65
Bra027656.1-P Field mustard cytosol 43.17 29.22
Os08t0248400-01 Rice mitochondrion 20.09 29.09
TraesCS2B01G126900.1 Wheat cytosol 17.43 29.06
OQU82832 Sorghum cytosol 13.03 29.02
HORVU6Hr1G017870.2 Barley mitochondrion 13.5 28.67
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 16.8 28.31
TraesCS6D01G083300.1 Wheat mitochondrion 19.78 28.25
Os10t0501700-00 Rice cytosol 20.09 28.19
TraesCS6A01G015000.1 Wheat mitochondrion 18.37 28.19
HORVU1Hr1G011250.1 Barley cytosol 13.03 28.14
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 21.19 27.89
TraesCSU01G089700.1 Wheat mitochondrion 21.04 27.8
TraesCS7D01G231400.1 Wheat cytosol, plastid 17.58 27.79
Os10t0497366-00 Rice mitochondrion 17.43 27.68
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 21.66 27.44
TraesCS6D01G083100.1 Wheat cytosol 21.04 27.35
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 20.57 27.23
TraesCSU01G090200.1 Wheat cytosol 18.84 27.15
TraesCS6B01G127500.1 Wheat cytosol 20.88 27.14
TraesCS6D01G083400.1 Wheat mitochondrion 20.88 26.98
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 21.35 26.93
TraesCS1D01G058000.1 Wheat cytosol 16.95 26.6
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 18.05 26.56
TraesCSU01G089800.1 Wheat mitochondrion 14.6 26.5
Os10t0499500-01 Rice mitochondrion 20.72 26.09
OQU88594 Sorghum cytosol 21.19 25.86
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 13.03 25.54
Os08t0107700-01 Rice cytosol, mitochondrion 14.91 25.4
KXG34536 Sorghum mitochondrion 22.61 25.17
TraesCS6D01G076500.1 Wheat plastid 17.9 25.17
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 20.09 25.05
EER95949 Sorghum mitochondrion 26.06 25.04
Os08t0107800-01 Rice mitochondrion 24.49 25.0
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 9.89 24.9
Os10t0497432-01 Rice mitochondrion 10.36 24.81
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 16.8 24.37
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 18.21 24.17
TraesCS1B01G072700.1 Wheat cytosol 19.15 23.92
OQU82856 Sorghum cytosol 27.94 23.67
TraesCS6B01G021600.1 Wheat mitochondrion 26.53 23.6
TraesCS6D01G047700.1 Wheat mitochondrion 25.59 23.59
Os10t0495200-01 Rice mitochondrion 28.89 23.53
TraesCS1D01G068600.1 Wheat plastid 12.56 23.53
KXG27690 Sorghum cytosol, plastid 26.84 23.39
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 26.22 23.39
HORVU6Hr1G014310.1 Barley mitochondrion 25.12 23.29
EES09203 Sorghum cytosol 29.04 23.18
TraesCS1B01G072300.1 Wheat plastid 20.57 23.06
TraesCS1B01G086000.1 Wheat plastid 24.8 23.03
OQU80148 Sorghum mitochondrion 26.22 22.97
TraesCS7B01G469500.1 Wheat cytosol 20.25 22.95
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 25.75 22.94
TraesCS1D01G057800.1 Wheat mitochondrion 13.03 22.86
OQU82823 Sorghum cytosol 28.57 22.84
TraesCS1B01G092600.1 Wheat plastid 18.52 22.82
TraesCS1A01G073800.1 Wheat mitochondrion 11.93 22.82
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 12.24 22.81
OQU82836 Sorghum cytosol 21.82 22.71
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 13.5 22.69
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 25.43 22.66
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 25.43 22.66
TraesCS1B01G038200.1 Wheat mitochondrion 22.45 22.59
OQU82827 Sorghum cytosol 28.26 22.58
Os10t0497300-01 Rice mitochondrion 28.1 22.54
TraesCS6D01G017800.1 Wheat cytosol 18.84 22.35
TraesCS1D01G058400.1 Wheat cytosol 18.05 22.33
TraesCS1B01G073200.1 Wheat cytosol 10.52 22.11
TraesCS1D01G069100.1 Wheat mitochondrion 22.29 22.08
EES07882 Sorghum cytosol 26.69 21.88
TraesCS1D01G056600.1 Wheat mitochondrion 6.91 21.78
TraesCS1A01G031700.1 Wheat plastid 25.27 21.73
TraesCS6A01G083000.1 Wheat cytosol 15.54 21.71
KXG28799 Sorghum plastid 25.75 21.58
TraesCS6D01G290900.1 Wheat mitochondrion 24.65 21.42
Zm00001d009733_P001 Maize cytosol 26.69 21.38
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 23.39 21.38
TraesCS1D01G055300.1 Wheat cytosol 20.72 21.36
TraesCS1B01G072400.1 Wheat cytosol 23.23 21.3
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 22.14 21.23
OQU82831 Sorghum cytosol 20.41 21.21
TraesCS1B01G315500.1 Wheat mitochondrion 10.68 21.18
TraesCS6D01G017700.1 Wheat plastid 17.74 21.16
KXG19780 Sorghum cytosol 19.62 21.15
TraesCS1D01G056700.1 Wheat cytosol 20.09 21.09
TraesCS1D01G068500.1 Wheat mitochondrion 26.84 21.06
TraesCS1D01G068900.1 Wheat mitochondrion 26.84 21.03
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.9 20.97
TraesCS1B01G073100.1 Wheat cytosol 19.94 20.96
TraesCS1B01G085300.1 Wheat mitochondrion 25.9 20.83
TraesCS1D01G068800.1 Wheat plastid 26.69 20.83
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 20.88 20.81
TraesCS1A01G054700.2 Wheat mitochondrion 26.53 20.81
HORVU1Hr1G014040.1 Barley mitochondrion 27.16 20.77
Os04t0349600-01 Rice plastid 12.56 20.67
TraesCS1A01G067000.1 Wheat mitochondrion 23.23 20.67
TraesCS1A01G054500.1 Wheat mitochondrion 25.27 20.64
TraesCS1B01G085900.1 Wheat mitochondrion 26.37 20.64
HORVU0Hr1G035310.1 Barley cytosol 18.84 20.62
TraesCS1B01G075300.1 Wheat cytosol 19.31 20.6
TraesCS1B01G085400.1 Wheat cytosol 20.72 20.59
TraesCS6B01G114300.1 Wheat cytosol 12.56 20.57
TraesCS1A01G031600.1 Wheat cytosol 21.35 20.54
TraesCS1A01G066600.1 Wheat mitochondrion 8.48 20.53
Zm00001d007555_P001 Maize plastid 26.22 20.52
TraesCS2D01G533000.1 Wheat cytosol, extracellular 21.19 20.49
TraesCS1D01G056200.1 Wheat mitochondrion 26.53 20.48
TraesCS2D01G532500.1 Wheat plastid 21.82 20.44
TraesCS1A01G067600.1 Wheat mitochondrion 26.06 20.42
Zm00001d007531_P001 Maize plastid 26.06 20.39
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.27 20.33
Os08t0110200-01 Rice mitochondrion 25.43 20.3
TraesCS6A01G014600.1 Wheat cytosol 12.56 20.25
TraesCS1A01G067400.1 Wheat mitochondrion 26.06 20.12
TraesCS1A01G055800.1 Wheat mitochondrion 24.33 20.1
HORVU1Hr1G010970.1 Barley mitochondrion 26.06 20.1
Zm00001d007534_P001 Maize plastid 24.49 20.08
TraesCS2A01G531000.1 Wheat golgi 21.35 20.03
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 21.98 20.03
Zm00001d007548_P001 Maize plastid 25.59 20.02
HORVU6Hr1G002890.6 Barley cytosol, plastid 24.96 20.0
TraesCS2A01G530600.1 Wheat cytosol 24.02 20.0
Zm00001d007559_P001 Maize plastid 25.59 19.95
TraesCS1A01G054800.1 Wheat cytosol 18.21 19.93
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 21.04 19.91
HORVU1Hr1G013810.1 Barley plastid 26.22 19.9
HORVU6Hr1G076780.7 Barley mitochondrion 25.75 19.9
TraesCS1B01G039700.1 Wheat cytosol 19.0 19.9
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 25.9 19.88
KXG35774 Sorghum cytosol, mitochondrion 14.76 19.87
TraesCS2A01G526200.1 Wheat golgi 21.19 19.82
TraesCS1D01G068400.1 Wheat mitochondrion 25.59 19.81
TraesCS2D01G532400.1 Wheat cytosol 19.0 19.8
HORVU1Hr1G004750.6 Barley plastid 24.8 19.8
HORVU0Hr1G031920.1 Barley plastid 26.69 19.77
HORVU1Hr1G011150.1 Barley cytosol, plastid 27.32 19.71
TraesCS1B01G072900.2 Wheat mitochondrion 27.0 19.7
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 24.02 19.62
TraesCS2B01G560700.1 Wheat plastid 23.7 19.59
TraesCS1D01G076500.1 Wheat mitochondrion 20.41 19.58
TraesCS1B01G038400.1 Wheat cytosol 18.68 19.57
TraesCS2D01G532300.1 Wheat plastid 23.86 19.54
TraesCS2B01G560300.1 Wheat cytosol 17.43 19.51
TraesCS2D01G532600.1 Wheat plastid 23.7 19.46
TraesCS1B01G071600.1 Wheat mitochondrion 25.9 19.46
HORVU1Hr1G011160.2 Barley cytosol, plastid 27.32 19.44
TraesCS2B01G559900.1 Wheat cytosol 16.48 19.37
TraesCS1A01G057300.1 Wheat cytosol 21.82 19.36
HORVU1Hr1G014060.1 Barley plastid 27.0 19.33
HORVU1Hr1G010890.5 Barley cytosol 27.0 19.15
TraesCS1B01G039100.1 Wheat mitochondrion 23.39 19.03
TraesCS1B01G092500.1 Wheat mitochondrion 23.39 19.03
TraesCS1D01G076900.1 Wheat plastid 19.62 19.03
TraesCS1B01G038500.1 Wheat mitochondrion 23.55 18.99
TraesCS2D01G532100.1 Wheat mitochondrion 20.57 18.93
TraesCS1A01G055500.1 Wheat mitochondrion 6.44 18.89
TraesCS2A01G531100.1 Wheat cytosol 16.8 18.8
HORVU1Hr1G011300.3 Barley plastid 27.16 18.8
TraesCS6A01G311600.1 Wheat mitochondrion 24.65 18.78
TraesCS1B01G039200.1 Wheat mitochondrion 22.61 18.37
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 21.66 18.02
TraesCS1A01G073600.1 Wheat mitochondrion 10.99 17.86
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 20.09 17.85
TraesCS1D01G058500.1 Wheat plastid 15.86 17.72
TraesCS6B01G129100.1 Wheat cytosol, plastid 8.01 17.71
TraesCS1A01G074000.1 Wheat mitochondrion 7.85 17.67
TraesCS1D01G068700.1 Wheat cytosol 12.09 17.54
TraesCS1A01G073700.1 Wheat cytosol 10.52 17.4
Zm00001d009735_P001 Maize cytosol 26.37 17.27
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 6.12 17.11
OQU82834 Sorghum cytosol 25.75 17.03
TraesCS1B01G084800.1 Wheat cytosol 12.09 16.59
HORVU1Hr1G011400.44 Barley plastid 15.86 16.4
OQU82833 Sorghum cytosol 11.15 15.85
TraesCS1D01G076400.1 Wheat cytosol 8.79 15.43
TraesCS1A01G056000.1 Wheat cytosol 9.73 15.42
Os04t0351333-00 Rice cytosol 21.19 15.36
TraesCS1B01G038300.1 Wheat plastid 12.87 15.02
TraesCS1D01G033000.1 Wheat cytosol 9.42 14.85
TraesCS1A01G067800.1 Wheat cytosol 8.48 14.44
TraesCS1D01G076700.1 Wheat cytosol 7.38 14.07
TraesCS6B01G341800.2 Wheat cytosol 8.79 14.04
TraesCS1B01G038600.1 Wheat cytosol 7.69 13.5
TraesCS1D01G067600.1 Wheat cytosol 7.54 13.15
OQU88581 Sorghum cytosol 20.09 11.78
TraesCS1D01G057700.1 Wheat cytosol 5.97 11.69
TraesCS1A01G055600.1 Wheat cytosol 5.65 11.08
TraesCS2D01G532200.1 Wheat cytosol 5.02 10.92
Protein Annotations
EnsemblPlants:Bra026958.1EnsemblPlants:Bra026958.1-PEnsemblPlantsGene:Bra026958Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015
PANTHER:PTHR24015:SF1649PFAM:PF12854PFAM:PF13041PFscan:PS51375SignalP:SignalP-noTMSUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI0002542881UniProt:M4EDU8MapMan:35.1::
Description
AT1G12300 (E=6e-261) | pentatricopeptide (PPR) repeat-containing protein
Coordinates
chrA09:+:34481111..34483024
Molecular Weight (calculated)
70900.2 Da
IEP (calculated)
6.129
GRAVY (calculated)
0.059
Length
637 amino acids
Sequence
(BLAST)
001: MMLMIRIRSA KALRSAWPLL LETAGNLITS LLHSPYEFLS FVCGRGFSSS DRNLCYRETL RSGLVDIKKD DAVALFQSML RSRPLPTVID FNRLFGLLAK
101: TKQYDLVLAL CKQMELKGIA YDLYTLNIMI NCFCRRRKLG FAFSAMGKIL KLGYQPSTIT FSTLINGLSL VGKVSEAVEL VDRMVGMKVI PNLIILNTIV
201: NGLCLQDRLS EAMALIDRMM ANGCQPDTFT YGPVLNRMCK SGNTSSALDL LRKMEGRKIE LDAAKYNVII DSLCKDGSLE DALILFNEME TKGAKANVIT
301: YSSLIGGFCS AGRWDDGAQL LRDMITRGIT PNVVTFNALI DSFVKEGKLS EAEELYNEMI PRGIDPNTIT YSTLIYGLCY EKRLDEANQM LDLMVSKGCD
401: PDIWTYNILI NGYCKAKLVD EGMRLFRKMS LRGLVADTVT YSSLIQGFCQ VGKLKVAKEL FQEMVSEGAH PDIVTYGILL DGLCDNGELE EAMEILEKMH
501: KTKTELDIGI YSIIIHGMCN ASKVDEAWDL FCSLPSKGVK PDVKTYTVMI SGLCKKGSLP EAKMLLRKME EDGIAPNDCT YNTLIRAHLR GSDISNSVEL
601: IEEMKRCGFS ADASTMKMVM DMLSDGGLDK SFLDMLS
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.