Factsheet for Os10t0495200-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 16489123

gfp PMID: 16489123 doi

Z Wang, Y Zou, X Li, Q Zhang, L Chen, H Wu, D Su, Y Chen, J Guo, D Luo, Y Long, Y Zhong, YG Liu

Key Laboratory of Plant Functional Genomics and Biotechnology of Guangdong Province, College of Life Sciences, South China Agricultural University, Guangzhou 510642, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0497432-01	Rice	mitochondrion	30.18	88.72
Os10t0497366-00	Rice	mitochondrion	43.35	84.54
Os10t0497300-01	Rice	mitochondrion	85.68	84.38
Os10t0495100-01	Rice	cytosol, mitochondrion	49.23	83.51
Os08t0248400-01	Rice	mitochondrion	42.97	76.36
Os10t0501700-00	Rice	cytosol	43.22	74.45
Os10t0499500-01	Rice	mitochondrion	47.95	74.11
Os08t0107800-01	Rice	mitochondrion	48.85	61.22
Os08t0107700-01	Rice	cytosol, mitochondrion	28.77	60.16
Os08t0110200-01	Rice	mitochondrion	59.85	58.65
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	51.92	56.78
OQU82836	Sorghum	cytosol	44.37	56.7
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	51.66	56.5
TraesCS6A01G014600.1	Wheat	cytosol	28.52	56.46
Zm00001d018982_P001	Maize	mitochondrion	25.19	56.29
HORVU1Hr1G018190.2	Barley	cytosol	20.33	55.79
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	50.64	55.46
TraesCS6B01G021600.1	Wheat	mitochondrion	50.64	55.31
OQU82831	Sorghum	cytosol	43.35	55.3
KXG27690	Sorghum	cytosol, plastid	51.53	55.13
TraesCS6D01G017800.1	Wheat	cytosol	37.85	55.12
OQU82833	Sorghum	cytosol	31.2	54.46
EES07882	Sorghum	cytosol	54.09	54.44
KXG19780	Sorghum	cytosol	41.05	54.31
TraesCS6D01G017700.1	Wheat	plastid	37.08	54.31
TraesCSU01G090200.1	Wheat	cytosol	30.56	54.07
TraesCSU01G089700.1	Wheat	mitochondrion	33.25	53.94
Zm00001d009733_P001	Maize	cytosol	54.73	53.84
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	17.39	53.75
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	49.1	53.71
OQU80148	Sorghum	mitochondrion	49.62	53.37
OQU82827	Sorghum	cytosol	53.71	52.7
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	21.87	52.62
OQU82823	Sorghum	cytosol	53.45	52.45
TraesCSU01G089800.1	Wheat	mitochondrion	23.53	52.42
TraesCS6A01G015000.1	Wheat	mitochondrion	27.49	51.81
HORVU6Hr1G014310.1	Barley	mitochondrion	44.25	50.36
OQU82832	Sorghum	cytosol	18.29	50.0
EES09203	Sorghum	cytosol	50.77	49.75
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	24.04	49.6
TraesCS6D01G076500.1	Wheat	plastid	28.64	49.45
HORVU6Hr1G002890.6	Barley	cytosol, plastid	48.98	48.18
TraesCS6D01G047700.1	Wheat	mitochondrion	41.56	47.03
TraesCS6A01G083000.1	Wheat	cytosol	27.24	46.71
TraesCS6B01G114300.1	Wheat	cytosol	23.15	46.53
Zm00001d009735_P001	Maize	cytosol	53.96	43.37
OQU82856	Sorghum	cytosol	41.3	42.95
OQU82834	Sorghum	cytosol	51.41	41.74
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	39.77	40.6
KRH39057	Soybean	cytosol	22.25	35.01
KRH39054	Soybean	cytosol	21.99	34.61
KRH39112	Soybean	cytosol	21.99	34.61
Bra036649.1-P	Field mustard	cytosol	17.26	34.53
KRH39004	Soybean	cytosol	21.87	34.41
Os04t0351333-00	Rice	cytosol	38.49	34.24
KRH39072	Soybean	cytosol	21.61	34.07
KRH39074	Soybean	cytosol	21.61	34.0
KRH40513	Soybean	plastid	14.96	33.33
Os04t0349600-01	Rice	plastid	16.5	33.33
AT1G63330.2	Thale cress	cytosol	23.66	33.09
Solyc06g007280.2.1	Tomato	cytosol	10.74	32.94
KRH31646	Soybean	cytosol	21.61	32.63
Bra027636.1-P	Field mustard	cytosol	13.43	32.41
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	20.72	32.08
KRH08636	Soybean	cytosol	21.36	31.99
KRH39066	Soybean	cytosol	22.63	31.89
KRH48615	Soybean	mitochondrion	22.12	31.74
Bra027029.1-P	Field mustard	mitochondrion	9.85	31.69
Solyc06g005220.2.1	Tomato	cytosol	16.37	31.53
VIT_12s0028g02320.t01	Wine grape	mitochondrion	19.18	31.45
KRH39050	Soybean	mitochondrion	21.23	31.2
AT1G62930.1	Thale cress	plastid	25.06	31.16
Bra026884.1-P	Field mustard	cytosol	18.29	31.15
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	20.84	31.05
Bra006187.1-P	Field mustard	plastid	11.51	30.93
KRH08277	Soybean	plastid	22.38	30.86
Bra036651.1-P	Field mustard	mitochondrion	20.97	30.65
AT1G62910.1	Thale cress	mitochondrion	24.68	30.54
AT1G62670.1	Thale cress	mitochondrion	24.55	30.48
AT1G63130.1	Thale cress	mitochondrion	24.55	30.48
KRH08628	Soybean	plastid	21.48	30.43
VIT_14s0081g00110.t01	Wine grape	cytosol	19.05	30.35
Solyc06g007810.1.1	Tomato	cytosol	10.36	30.22
AT1G62914.1	Thale cress	mitochondrion	20.33	30.11
AT3G22470.1	Thale cress	cytosol, mitochondrion	23.79	30.05
KRH08671	Soybean	cytosol, mitochondrion	21.23	30.02
AT1G63150.1	Thale cress	mitochondrion	24.04	29.89
VIT_14s0081g00120.t01	Wine grape	plastid	22.25	29.85
AT1G63070.1	Thale cress	mitochondrion	22.51	29.83
KRH25652	Soybean	cytosol, golgi	20.59	29.81
AT1G62590.1	Thale cress	mitochondrion	24.17	29.81
AT1G63080.3	Thale cress	mitochondrion	23.27	29.64
AT1G63400.1	Thale cress	cytosol, plastid	21.87	29.64
AT1G12620.1	Thale cress	cytosol, mitochondrion	23.53	29.63
KRH08607	Soybean	cytosol	21.23	29.59
Bra026971.1-P	Field mustard	mitochondrion	23.79	29.57
KRH08639	Soybean	mitochondrion, plastid	21.36	29.56
Bra021192.1-P	Field mustard	plastid	18.93	29.37
KRH17148	Soybean	mitochondrion	20.46	29.36
KRH09154	Soybean	mitochondrion	20.84	29.32
PGSC0003DMT400052977	Potato	cytosol	14.58	29.31
KRH40400	Soybean	plastid	21.61	29.29
Bra026882.1-P	Field mustard	cytosol	19.95	29.21
AT5G16640.1	Thale cress	mitochondrion	18.8	29.17
VIT_14s0081g00270.t01	Wine grape	plastid	21.61	29.14
KRH41817	Soybean	mitochondrion	20.59	29.01
KRH09084	Soybean	plastid	18.93	28.96
Bra027658.1-P	Field mustard	cytosol, mitochondrion	20.08	28.91
Bra026958.1-P	Field mustard	mitochondrion	23.53	28.89
Bra028267.1-P	Field mustard	mitochondrion	23.02	28.75
Bra026836.1-P	Field mustard	cytosol, mitochondrion	18.03	28.72
AT1G62720.1	Thale cress	mitochondrion	17.77	28.66
KRH08625	Soybean	plastid	21.1	28.65
PGSC0003DMT400008759	Potato	cytosol	11.64	28.53
Bra025516.1-P	Field mustard	cytosol, mitochondrion	17.39	28.51
Bra016762.1-P	Field mustard	mitochondrion	22.12	28.5
Bra026954.1-P	Field mustard	mitochondrion	23.66	28.46
AT1G12300.1	Thale cress	mitochondrion	23.15	28.41
Bra027026.1-P	Field mustard	mitochondrion	18.8	28.11
AT1G12775.1	Thale cress	cytosol, mitochondrion	23.15	28.11
AT3G16710.1	Thale cress	mitochondrion	18.16	28.01
Bra031731.1-P	Field mustard	mitochondrion	18.16	27.95
AT1G64580.1	Thale cress	mitochondrion	18.67	27.92
CDX68679	Canola	cytosol	4.09	27.83
AT1G62680.2	Thale cress	plastid	19.44	27.74
AT1G12700.2	Thale cress	cytosol	21.87	27.67
VIT_14s0030g02280.t01	Wine grape	plastid	19.82	27.63
PGSC0003DMT400025087	Potato	endoplasmic reticulum	17.39	27.47
PGSC0003DMT400008757	Potato	cytosol	17.39	27.31
Solyc06g007740.1.1	Tomato	cytosol	20.59	27.29
PGSC0003DMT400025074	Potato	cytosol	19.18	27.17
AT1G64583.1	Thale cress	mitochondrion	17.77	27.15
Solyc06g007300.1.1	Tomato	extracellular	20.46	27.03
KRH09121	Soybean	mitochondrion	18.41	26.97
AT1G06580.1	Thale cress	mitochondrion	17.14	26.8
VIT_14s0081g00280.t01	Wine grape	mitochondrion	21.87	26.76
Bra026957.1-P	Field mustard	mitochondrion	20.59	26.7
PGSC0003DMT400056663	Potato	plastid	19.95	26.53
AT5G41170.1	Thale cress	mitochondrion	17.77	26.38
PGSC0003DMT400053185	Potato	mitochondrion	19.82	26.27
PGSC0003DMT400025067	Potato	cytosol	15.98	26.26
KRH09082	Soybean	cytosol	13.68	26.23
PGSC0003DMT400015293	Potato	mitochondrion	20.33	26.07
PGSC0003DMT400015298	Potato	mitochondrion	20.33	26.07
PGSC0003DMT400056665	Potato	mitochondrion	19.57	25.98
Solyc04g080120.1.1	Tomato	extracellular	20.08	25.65
PGSC0003DMT400008760	Potato	mitochondrion	19.18	25.6
PGSC0003DMT400052971	Potato	mitochondrion	18.93	24.96
KRH08599	Soybean	cytosol, plastid	21.23	24.81
AT4G26800.2	Thale cress	mitochondrion, plastid	16.24	24.71
PGSC0003DMT400053182	Potato	cytosol	18.93	24.71
Bra027726.1-P	Field mustard	mitochondrion	14.83	24.63
KRH09095	Soybean	plastid	18.29	24.44
KRH09097	Soybean	plastid	18.03	24.19
VIT_14s0030g02260.t01	Wine grape	cytosol	13.68	24.15
PGSC0003DMT400053556	Potato	mitochondrion	13.68	23.31
Bra026401.1-P	Field mustard	plastid	15.86	23.18
AT1G64100.2	Thale cress	cytosol	23.66	22.95
Bra027656.1-P	Field mustard	cytosol	25.83	21.47
KRH12873	Soybean	cytosol	18.03	20.26
KRH09085	Soybean	mitochondrion	18.16	20.17
KRH39064	Soybean	cytosol	23.15	18.68
Bra016758.1-P	Field mustard	plastid	22.76	15.36

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	ProteinID:ABB47822.1	ProteinID:AIC74552.1	ProteinID:BAF26863.1	ProteinID:BAT11468.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	EnsemblPlantsGene:Os10g0495200	EnsemblPlants:Os10t0495200-01	PFAM:PF12854
PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF302	InterPro:Pentatricopeptide_repeat	UniProt:Q337H7
SUPFAM:SSF48452	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00005E1F2F	SEG:seg

Description

restorer-of-fertility 4, fertility restorer 4, pentatricopeptide repeat (PPR)-encoding gene 782a, pentatricopeptide repeat-containing protein 782a, pentatricopeptide repeat protein 9, pentatricopeptide repeat motif containing gene 3, PPR motif-containing gene 3Similar to Fertility restorer. (Os10t0495200-01);Similar to Fertility restorer. (Os10t0495200-02)

Coordinates

chr10:-:18832249..18836049

Molecular Weight (calculated)

86033.5 Da

IEP (calculated)

6.798

GRAVY (calculated)

-0.038

Length

782 amino acids

Sequence
(BLAST)

001: MARRVPTRPR GGGGGGVPRS EGSIQGRGGR AGGSGAEDAR HVFDELLRRG RGASIYGLNR ALADVARHSP AAAVSRYNRM ARAGAGKVTP TVHTYAILIG
101: CCCRAGRLDL GFAALGNVVK KGFRVDAITF TPLLKGLCAD KRTSDAMDIV LRRMTELGCI PDVFSYNNLL KGLCDENRSQ EALELLHMMA DDRGGGSPPD
201: VVSYNTVLNG FFKEGDSDKA YSTYHEMLDR GILPDVVTYS SIIAALCKAQ AMDKAMEVLN TMVKNGVMPD CMTYNSILHG YCSSGQPKEA IGTLKKMRSD
301: GVEPNVVTYS SLMNYLCKNG RSTEARKIFD SMTKRGLEPD IATYRTLLQG YATKGALVEM HALLDLMVRN GIQPDHHVFN ILICAYAKQE KVDQAMLVFS
401: KMRQHGLNPN VVCYGTVIDV LCKSGSVDDA MLYFEQMIDE GLTPNIIVYT SLIHGLCTCD KWDKAEELIL EMLDRGICLN TIFFNSIIDS HCKEGRVIES
501: EKLFDLMVRI GVKPDIITYN TLIDGCCLAG KMDEATKLLA SMVSVGVKPD IVTYGTLING YCRVSRMDDA LALFKEMVSS GVSPNIITYN IILQGLFHTR
601: RTAAAKELYV SITKSGTQLE LSTYNIILHG LCKNNLTDEA LRMFQNLCLT DLQLETRTFN IMIGALLKCG RMDEAKDLFA AHSANGLVPD VRTYSLMAEN
701: LIEQGSLEEL DDLFLSMEEN GCSADSRMLN SIVRKLLQRG DITRAGTYLF MIDEKHFSLE ASTASFLLES SPIVWEQISR IS

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.