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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:
  • plastid 5
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Plant-mPloc:plastid
PProwler:plastid
TargetP:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 Os03t0596900-01 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os04t0349600-01 Rice plastid 34.33 67.96
TraesCS1D01G058400.1 Wheat cytosol 40.21 59.81
TraesCS1D01G076700.1 Wheat cytosol 25.59 58.68
TraesCS2B01G126900.1 Wheat cytosol 28.85 57.85
Os04t0351333-00 Rice cytosol 63.58 55.4
TraesCS1B01G038400.1 Wheat cytosol 43.86 55.26
HORVU0Hr1G035310.1 Barley cytosol 41.78 54.98
HORVU1Hr1G011250.1 Barley cytosol 21.15 54.92
TraesCS1B01G038600.1 Wheat cytosol 25.98 54.82
TraesCS1A01G055600.1 Wheat cytosol 23.24 54.77
TraesCS1B01G075300.1 Wheat cytosol 42.17 54.1
TraesCS1D01G056700.1 Wheat cytosol 42.82 54.04
TraesCS1D01G033000.1 Wheat cytosol 28.46 53.96
TraesCS1B01G084800.1 Wheat cytosol 32.38 53.45
TraesCS1A01G056000.1 Wheat cytosol 27.94 53.23
TraesCS1B01G073100.1 Wheat cytosol 42.04 53.14
TraesCS1B01G039700.1 Wheat cytosol 42.17 53.12
TraesCS1D01G057700.1 Wheat cytosol 22.45 52.92
TraesCS1D01G067600.1 Wheat cytosol 25.07 52.6
TraesCS1A01G054800.1 Wheat cytosol 39.95 52.58
TraesCS1D01G068700.1 Wheat cytosol 29.9 52.16
TraesCS1B01G038200.1 Wheat mitochondrion 43.08 52.13
TraesCS1D01G055300.1 Wheat cytosol 42.04 52.1
TraesCS1A01G031600.1 Wheat cytosol 44.91 51.96
TraesCS6B01G341800.2 Wheat cytosol 27.02 51.88
TraesCS1A01G073700.1 Wheat cytosol 25.98 51.69
TraesCS1B01G039200.1 Wheat mitochondrion 52.87 51.66
TraesCS1B01G038500.1 Wheat mitochondrion 53.26 51.65
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 47.0 51.5
HORVU1Hr1G004750.6 Barley plastid 53.26 51.13
TraesCS1B01G039100.1 Wheat mitochondrion 52.22 51.09
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 52.35 50.95
TraesCS1A01G067800.1 Wheat cytosol 24.8 50.8
TraesCS1B01G085400.1 Wheat cytosol 42.17 50.39
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 51.7 50.0
TraesCS1A01G067600.1 Wheat mitochondrion 53.0 49.94
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 41.64 49.92
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 43.08 49.7
TraesCS1A01G054700.2 Wheat mitochondrion 52.61 49.63
TraesCS6D01G290900.1 Wheat mitochondrion 47.39 49.52
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 50.39 49.49
TraesCS1A01G067400.1 Wheat mitochondrion 53.26 49.45
TraesCS1B01G085900.1 Wheat mitochondrion 52.48 49.39
TraesCS1D01G068400.1 Wheat mitochondrion 53.0 49.33
TraesCS1D01G058000.1 Wheat cytosol 26.11 49.26
TraesCS1B01G072400.1 Wheat cytosol 44.65 49.21
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 43.08 49.03
TraesCS1D01G068500.1 Wheat mitochondrion 51.96 49.01
TraesCS1A01G031700.1 Wheat plastid 47.39 48.99
TraesCS1B01G092500.1 Wheat mitochondrion 50.0 48.91
HORVU6Hr1G076780.7 Barley mitochondrion 52.48 48.79
TraesCS1D01G068900.1 Wheat mitochondrion 51.7 48.71
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 44.26 48.64
TraesCS1D01G068800.1 Wheat plastid 51.7 48.53
TraesCS1D01G076500.1 Wheat mitochondrion 42.04 48.49
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 18.8 48.48
KXG35774 Sorghum cytosol, mitochondrion 29.9 48.41
TraesCS1A01G055800.1 Wheat mitochondrion 48.56 48.25
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 21.54 48.25
HORVU1Hr1G013810.1 Barley plastid 52.61 48.03
TraesCS1D01G056200.1 Wheat mitochondrion 51.7 48.0
TraesCS6A01G311600.1 Wheat mitochondrion 52.35 47.97
HORVU1Hr1G010970.1 Barley mitochondrion 51.44 47.7
TraesCS1A01G054500.1 Wheat mitochondrion 48.56 47.69
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 51.44 47.47
TraesCS1B01G038300.1 Wheat plastid 33.81 47.44
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 44.26 47.28
TraesCS1B01G085300.1 Wheat mitochondrion 48.83 47.22
TraesCS1A01G057300.1 Wheat cytosol 44.13 47.08
HORVU0Hr1G031920.1 Barley plastid 52.74 46.98
Zm00001d007534_P001 Maize plastid 47.65 46.98
TraesCS1A01G067000.1 Wheat mitochondrion 43.73 46.79
TraesCS1B01G071600.1 Wheat mitochondrion 51.7 46.7
TraesCS1B01G072700.1 Wheat cytosol 30.94 46.47
TraesCS1B01G072900.2 Wheat mitochondrion 52.74 46.28
HORVU1Hr1G014040.1 Barley mitochondrion 50.26 46.22
TraesCS1B01G086000.1 Wheat plastid 41.38 46.21
TraesCS1D01G069100.1 Wheat mitochondrion 38.77 46.19
Zm00001d007555_P001 Maize plastid 48.43 45.58
KXG28799 Sorghum plastid 45.17 45.53
TraesCS1B01G315500.1 Wheat mitochondrion 19.06 45.48
TraesCS1D01G058500.1 Wheat plastid 33.81 45.44
Os10t0501700-00 Rice cytosol 26.89 45.37
TraesCS1B01G092600.1 Wheat plastid 30.55 45.26
Zm00001d007531_P001 Maize plastid 48.04 45.21
Zm00001d007548_P001 Maize plastid 47.78 44.96
TraesCS1A01G073600.1 Wheat mitochondrion 22.98 44.9
HORVU1Hr1G011160.2 Barley cytosol, plastid 52.35 44.8
Zm00001d007559_P001 Maize plastid 47.78 44.8
HORVU1Hr1G010890.5 Barley cytosol 52.35 44.65
HORVU1Hr1G011150.1 Barley cytosol, plastid 51.04 44.28
TraesCS1D01G076900.1 Wheat plastid 37.47 43.68
TraesCS1D01G076400.1 Wheat cytosol 20.63 43.53
TraesCS1D01G068600.1 Wheat plastid 19.19 43.24
HORVU1Hr1G011300.3 Barley plastid 51.7 43.04
HORVU1Hr1G014060.1 Barley plastid 49.87 42.92
TraesCS1B01G072300.1 Wheat plastid 31.72 42.78
TraesCS1A01G067700.1 Wheat extracellular 18.67 42.43
TraesCS1A01G073800.1 Wheat mitochondrion 18.41 42.34
TraesCS1D01G057800.1 Wheat mitochondrion 19.84 41.87
Os10t0497366-00 Rice mitochondrion 21.67 41.4
TraesCS1B01G073200.1 Wheat cytosol 16.19 40.92
HORVU1Hr1G011400.44 Barley plastid 32.64 40.58
Os10t0497300-01 Rice mitochondrion 41.78 40.3
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 25.2 40.21
Os10t0495200-01 Rice mitochondrion 40.6 39.77
TraesCS1D01G056600.1 Wheat mitochondrion 9.92 37.62
Os10t0495100-01 Rice cytosol, mitochondrion 22.58 37.53
Os08t0107800-01 Rice mitochondrion 30.42 37.34
Os10t0499500-01 Rice mitochondrion 24.54 37.15
Os08t0110200-01 Rice mitochondrion 37.47 35.96
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 10.57 35.53
Os08t0248400-01 Rice mitochondrion 20.23 35.23
TraesCS1A01G074000.1 Wheat mitochondrion 12.66 34.28
TraesCS1A01G055500.1 Wheat mitochondrion 9.53 33.64
Os08t0107700-01 Rice cytosol, mitochondrion 16.19 33.16
TraesCS1A01G066600.1 Wheat mitochondrion 11.36 33.08
KRH39054 Soybean cytosol 19.97 30.78
KRH39112 Soybean cytosol 19.84 30.58
VIT_12s0028g02320.t01 Wine grape mitochondrion 18.8 30.19
KRH39074 Soybean cytosol 19.58 30.18
KRH39004 Soybean cytosol 19.45 29.98
VIT_14s0081g00110.t01 Wine grape cytosol 19.06 29.74
KRH39057 Soybean cytosol 19.19 29.58
Os10t0497432-01 Rice mitochondrion 10.18 29.32
KRH39072 Soybean cytosol 18.8 29.03
Solyc06g007280.2.1 Tomato cytosol 9.66 29.02
KRH48615 Soybean mitochondrion 20.37 28.62
KRH08636 Soybean cytosol 19.45 28.54
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 18.8 28.51
KRH39066 Soybean cytosol 20.5 28.29
KRH09154 Soybean mitochondrion 20.5 28.24
Bra027636.1-P Field mustard cytosol 11.88 28.09
KRH17148 Soybean mitochondrion 19.97 28.07
KRH09084 Soybean plastid 18.67 27.98
VIT_14s0081g00270.t01 Wine grape plastid 20.76 27.41
KRH40513 Soybean plastid 12.53 27.35
KRH41817 Soybean mitochondrion 19.71 27.21
KRH08628 Soybean plastid 19.58 27.17
KRH08671 Soybean cytosol, mitochondrion 19.58 27.12
Bra036649.1-P Field mustard cytosol 13.84 27.11
VIT_14s0081g00120.t01 Wine grape plastid 20.63 27.1
KRH08639 Soybean mitochondrion, plastid 19.84 26.9
KRH39050 Soybean mitochondrion 18.67 26.88
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 18.41 26.86
PGSC0003DMT400052977 Potato cytosol 13.45 26.48
Bra006187.1-P Field mustard plastid 10.05 26.46
KRH08277 Soybean plastid 19.58 26.45
KRH08607 Soybean cytosol 19.32 26.38
KRH31646 Soybean cytosol 17.75 26.25
KRH08625 Soybean plastid 19.58 26.04
KRH40400 Soybean plastid 19.19 25.48
AT5G16640.1 Thale cress mitochondrion 16.58 25.2
VIT_14s0030g02280.t01 Wine grape plastid 18.41 25.13
Solyc06g005220.2.1 Tomato cytosol 13.32 25.12
VIT_14s0081g00280.t01 Wine grape mitochondrion 20.89 25.04
KRH09082 Soybean cytosol 13.32 25.0
KRH09121 Soybean mitochondrion 17.36 24.91
KRH25652 Soybean cytosol, golgi 17.49 24.81
Bra026884.1-P Field mustard cytosol 14.75 24.62
Bra021192.1-P Field mustard plastid 16.19 24.6
AT1G64580.1 Thale cress mitochondrion 16.71 24.47
AT1G62720.1 Thale cress mitochondrion 15.4 24.33
Bra036651.1-P Field mustard mitochondrion 16.97 24.3
AT1G63330.2 Thale cress cytosol 17.62 24.15
PGSC0003DMT400008757 Potato cytosol 15.67 24.1
PGSC0003DMT400025074 Potato cytosol 17.23 23.91
AT3G22470.1 Thale cress cytosol, mitochondrion 19.32 23.91
PGSC0003DMT400008759 Potato cytosol 9.92 23.82
PGSC0003DMT400056665 Potato mitochondrion 18.28 23.77
AT1G63400.1 Thale cress cytosol, plastid 17.89 23.74
AT1G63080.3 Thale cress mitochondrion 18.93 23.62
Solyc06g007810.1.1 Tomato cytosol 8.22 23.51
KRH09097 Soybean plastid 17.89 23.5
Bra027029.1-P Field mustard mitochondrion 7.44 23.46
Solyc06g007300.1.1 Tomato extracellular 18.02 23.31
KRH09095 Soybean plastid 17.75 23.25
PGSC0003DMT400025087 Potato endoplasmic reticulum 15.01 23.23
Bra026882.1-P Field mustard cytosol 16.19 23.22
AT1G62930.1 Thale cress plastid 19.06 23.21
AT1G62670.1 Thale cress mitochondrion 19.06 23.17
PGSC0003DMT400056663 Potato plastid 17.75 23.13
PGSC0003DMT400025067 Potato cytosol 14.36 23.11
Bra025516.1-P Field mustard cytosol, mitochondrion 14.36 23.06
PGSC0003DMT400053185 Potato mitochondrion 17.75 23.05
AT1G12620.1 Thale cress cytosol, mitochondrion 18.54 22.87
AT1G62680.2 Thale cress plastid 16.32 22.81
AT1G12300.1 Thale cress mitochondrion 18.93 22.76
AT1G63070.1 Thale cress mitochondrion 17.49 22.71
Solyc06g007740.1.1 Tomato cytosol 17.49 22.71
AT1G63130.1 Thale cress mitochondrion 18.67 22.7
AT3G16710.1 Thale cress mitochondrion 15.01 22.68
AT1G64583.1 Thale cress mitochondrion 15.14 22.66
PGSC0003DMT400052971 Potato mitochondrion 17.36 22.43
AT1G63150.1 Thale cress mitochondrion 18.41 22.42
Bra026971.1-P Field mustard mitochondrion 18.41 22.42
AT1G62590.1 Thale cress mitochondrion 18.54 22.4
KRH08599 Soybean cytosol, plastid 19.45 22.27
Bra016762.1-P Field mustard mitochondrion 17.62 22.24
AT4G26800.2 Thale cress mitochondrion, plastid 14.88 22.18
AT1G12700.2 Thale cress cytosol 17.89 22.17
AT1G62914.1 Thale cress mitochondrion 15.27 22.16
Bra027658.1-P Field mustard cytosol, mitochondrion 15.67 22.1
Bra026401.1-P Field mustard plastid 15.4 22.06
PGSC0003DMT400008760 Potato mitochondrion 16.84 22.01
Bra027026.1-P Field mustard mitochondrion 15.01 21.99
PGSC0003DMT400015293 Potato mitochondrion 17.49 21.97
PGSC0003DMT400015298 Potato mitochondrion 17.49 21.97
Bra028267.1-P Field mustard mitochondrion 17.89 21.89
Bra031731.1-P Field mustard mitochondrion 14.49 21.85
AT1G06580.1 Thale cress mitochondrion 14.23 21.8
Solyc04g080120.1.1 Tomato extracellular 17.36 21.73
Bra026954.1-P Field mustard mitochondrion 18.41 21.69
AT1G62910.1 Thale cress mitochondrion 17.89 21.68
VIT_14s0030g02260.t01 Wine grape cytosol 12.53 21.67
Bra026958.1-P Field mustard mitochondrion 18.02 21.66
Bra027726.1-P Field mustard mitochondrion 13.32 21.66
Bra026957.1-P Field mustard mitochondrion 16.97 21.56
AT1G12775.1 Thale cress cytosol, mitochondrion 17.89 21.27
AT5G41170.1 Thale cress mitochondrion 14.62 21.25
PGSC0003DMT400053556 Potato mitochondrion 12.66 21.13
PGSC0003DMT400053182 Potato cytosol 16.45 21.04
Bra026836.1-P Field mustard cytosol, mitochondrion 13.19 20.57
CDX68679 Canola cytosol 3.0 20.0
KRH09085 Soybean mitochondrion 18.28 19.89
AT1G64100.2 Thale cress cytosol 19.71 18.73
Bra027656.1-P Field mustard cytosol 21.54 17.53
KRH12873 Soybean cytosol 15.67 17.24
KRH39064 Soybean cytosol 21.41 16.92
Bra016758.1-P Field mustard plastid 18.15 11.99
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1EntrezGene:4335550UniProt:A0A0P0W8V8ProteinID:BAS88719.1GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:IPR002885InterPro:IPR011990EnsemblPlantsGene:Os04g0350000EnsemblPlants:Os04t0350000-02
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFAM:PF13812PFscan:PS51375PANTHER:PTHR24015
PANTHER:PTHR24015:SF874InterPro:Pentatricopeptide_repeatSUPFAM:SSF48452TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sfUniParc:UPI000393B193
SEG:seg:::::
Description
Similar to PPR protein. (Os04t0350000-01);Hypothetical conserved gene. (Os04t0350000-02);Similar to PPR protein. (Os04t0350000-03)
Coordinates
chr4:+:16685163..16693432
Molecular Weight (calculated)
85209.9 Da
IEP (calculated)
8.665
GRAVY (calculated)
-0.091
Length
766 amino acids
Sequence
(BLAST)
001: APWLLTPPAG RPPAAAAEEK PRLLTTARRR RRRRSTSVMS QTTAPMSRRR LSSILASTAT ASSTAASTTT AATASPARPS PPAHAAFRER LRSGTLGPDD
101: ARHLFDELLL RRDAPAPARG LNELLSALAR APPSAACRDV PALAVELFKR MDRCACPEAA PTIYTYNILI NCYRRARRPD LGLPVFGRLL RTGLGPDVFS
201: YNALIDGFSK EGEVDKAHDL FYKMEEQGIM PNVVTYSSLI NGLCKTKEMD KAERVLRQMV GAGVRPNNMT YNCLIHGYST SGMWKESVRV FKEMSSSLLV
301: PDVGNCNSFM TALCKHGRIK EARDIFDSMV LKGPKPDVIS YGALLHGYAT AGCIAGMDNL FNVMVCEGVV PDRHVFNTLI NAYARLGMMD KSLLMFEDMT
401: KQGVNPDIIT FSTVISAFCR LGRLDDAMEK FNHMIDTGVP PDTAVYSCLI QGQCNRRDLV KAKELISDML SKGIPPPCIK FFTSIINNLC KEGRVAEGKD
501: VVDLIIHTGQ RPNLITFNSL VDGYCLVGNM KEAVGLLDSM ESVGVEPDIY TYNTLVDGYC KHGRIDDALT LFRDMLHKRV TLTSVSYNII LHGLFQARRT
601: IVAKEMFHEM IESGMAVSIH TYATVLGGLC RNNCTDEANM LLEKLFSMNV KFDILTFNIV IRAMFKVGRR QEAKELFAAI STYGLVPTIL TYRVMITNLI
701: KEESFEDADN LFSSMEKSSC TPDSRILNEI IRMLLNKVNG KYREYIKLLP EKYRFLREQA AVDNCI
Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)
001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS
Arabidopsis Description
RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.