Factsheet for HORVU1Hr1G014040.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G067600.1	Wheat	mitochondrion	80.91	82.9
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	81.15	81.45
TraesCS1D01G068900.1	Wheat	mitochondrion	77.19	79.09
HORVU6Hr1G076780.7	Barley	mitochondrion	71.55	72.33
HORVU1Hr1G014060.1	Barley	plastid	76.71	71.8
HORVU1Hr1G013810.1	Barley	plastid	72.03	71.51
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.78	70.11
HORVU1Hr1G010970.1	Barley	mitochondrion	68.91	69.49
HORVU0Hr1G035310.1	Barley	cytosol	48.38	69.24
HORVU1Hr1G011250.1	Barley	cytosol	24.37	68.81
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	24.25	68.01
HORVU0Hr1G031920.1	Barley	plastid	68.79	66.63
HORVU1Hr1G011160.2	Barley	cytosol, plastid	69.75	64.92
HORVU1Hr1G011150.1	Barley	cytosol, plastid	67.83	63.99
HORVU1Hr1G010890.5	Barley	cytosol	68.55	63.59
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	36.61	63.54
HORVU1Hr1G011400.44	Barley	plastid	46.7	63.15
HORVU1Hr1G011300.3	Barley	plastid	69.27	62.72
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	50.54	60.23
HORVU1Hr1G004750.6	Barley	plastid	57.38	59.9
KXG28799	Sorghum	plastid	52.34	57.37
Zm00001d007534_P001	Maize	plastid	52.7	56.5
Zm00001d007559_P001	Maize	plastid	55.22	56.3
Zm00001d007548_P001	Maize	plastid	54.98	56.27
Zm00001d007531_P001	Maize	plastid	54.74	56.02
Zm00001d007555_P001	Maize	plastid	54.74	56.02
HORVU6Hr1G017870.2	Barley	mitochondrion	20.05	55.67
KXG35774	Sorghum	cytosol, mitochondrion	28.69	50.53
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	46.22	50.26
HORVU1Hr1G018190.2	Barley	cytosol	16.81	49.12
Os04t0349600-01	Rice	plastid	20.89	44.96
Os04t0351333-00	Rice	cytosol	44.42	42.09
HORVU6Hr1G014310.1	Barley	mitochondrion	34.21	41.48
HORVU6Hr1G002890.6	Barley	cytosol, plastid	39.38	41.26
VIT_12s0028g02320.t01	Wine grape	mitochondrion	18.01	31.45
KRH39054	Soybean	cytosol	18.73	31.39
KRH39057	Soybean	cytosol	18.73	31.39
KRH39004	Soybean	cytosol	18.61	31.19
Solyc06g007280.2.1	Tomato	cytosol	9.48	30.98
VIT_14s0081g00110.t01	Wine grape	cytosol	18.25	30.96
KRH09084	Soybean	plastid	18.97	30.92
KRH39074	Soybean	cytosol	18.37	30.78
KRH08628	Soybean	plastid	20.05	30.25
KRH39072	Soybean	cytosol	18.01	30.24
KRH39112	Soybean	cytosol	17.89	29.98
VIT_14s0081g00120.t01	Wine grape	plastid	20.89	29.85
KRH40513	Soybean	plastid	12.48	29.63
KRH17148	Soybean	mitochondrion	19.21	29.36
Bra027636.1-P	Field mustard	cytosol	11.4	29.32
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	17.77	29.31
Bra026882.1-P	Field mustard	cytosol	18.73	29.21
Bra006187.1-P	Field mustard	plastid	10.2	29.21
KRH08639	Soybean	mitochondrion, plastid	19.81	29.2
KRH08607	Soybean	cytosol	19.57	29.06
KRH08671	Soybean	cytosol, mitochondrion	19.21	28.93
KRH08277	Soybean	plastid	19.69	28.92
Solyc06g007810.1.1	Tomato	cytosol	9.24	28.73
AT1G63330.2	Thale cress	cytosol	19.21	28.62
VIT_14s0081g00270.t01	Wine grape	plastid	19.93	28.62
Solyc06g005220.2.1	Tomato	cytosol	13.93	28.57
KRH08636	Soybean	cytosol	17.89	28.54
KRH48615	Soybean	mitochondrion	18.61	28.44
KRH39050	Soybean	mitochondrion	18.01	28.2
KRH40400	Soybean	plastid	19.45	28.08
KRH39066	Soybean	cytosol	18.61	27.93
KRH09154	Soybean	mitochondrion	18.61	27.88
AT5G16640.1	Thale cress	mitochondrion	16.81	27.78
Bra021192.1-P	Field mustard	plastid	16.81	27.78
Bra026884.1-P	Field mustard	cytosol	15.25	27.67
AT1G62670.1	Thale cress	mitochondrion	20.89	27.62
PGSC0003DMT400008759	Potato	cytosol	10.56	27.59
Bra027029.1-P	Field mustard	mitochondrion	8.04	27.57
KRH09082	Soybean	cytosol	13.45	27.45
AT1G62930.1	Thale cress	plastid	20.65	27.34
KRH08625	Soybean	plastid	18.85	27.26
PGSC0003DMT400052977	Potato	cytosol	12.73	27.25
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	17.17	27.24
Bra026958.1-P	Field mustard	mitochondrion	20.77	27.16
KRH09121	Soybean	mitochondrion	17.41	27.15
AT1G63130.1	Thale cress	mitochondrion	20.53	27.14
KRH41817	Soybean	mitochondrion	18.01	27.03
VIT_14s0081g00280.t01	Wine grape	mitochondrion	20.65	26.92
VIT_14s0030g02280.t01	Wine grape	plastid	18.13	26.92
Bra036649.1-P	Field mustard	cytosol	12.61	26.85
Bra016762.1-P	Field mustard	mitochondrion	19.57	26.85
AT3G22470.1	Thale cress	cytosol, mitochondrion	19.93	26.82
AT1G63400.1	Thale cress	cytosol, plastid	18.49	26.69
AT1G12300.1	Thale cress	mitochondrion	20.41	26.69
KRH25652	Soybean	cytosol, golgi	17.29	26.67
PGSC0003DMT400025074	Potato	cytosol	17.65	26.63
AT1G62590.1	Thale cress	mitochondrion	20.17	26.5
AT1G63080.3	Thale cress	mitochondrion	19.45	26.38
PGSC0003DMT400008757	Potato	cytosol	15.73	26.31
Solyc06g007740.1.1	Tomato	cytosol	18.61	26.27
KRH31646	Soybean	cytosol	16.33	26.25
AT1G12775.1	Thale cress	cytosol, mitochondrion	20.29	26.24
AT1G63150.1	Thale cress	mitochondrion	19.81	26.23
Bra025516.1-P	Field mustard	cytosol, mitochondrion	15.01	26.21
Bra036651.1-P	Field mustard	mitochondrion	16.81	26.17
Bra026954.1-P	Field mustard	mitochondrion	20.41	26.15
PGSC0003DMT400053185	Potato	mitochondrion	18.49	26.1
Bra026971.1-P	Field mustard	mitochondrion	19.69	26.07
PGSC0003DMT400025067	Potato	cytosol	14.89	26.05
AT1G12620.1	Thale cress	cytosol, mitochondrion	19.33	25.93
Bra027026.1-P	Field mustard	mitochondrion	16.21	25.81
KRH09095	Soybean	plastid	18.13	25.81
AT1G62910.1	Thale cress	mitochondrion	19.57	25.79
Bra027658.1-P	Field mustard	cytosol, mitochondrion	16.81	25.78
AT1G63070.1	Thale cress	mitochondrion	18.25	25.76
Bra028267.1-P	Field mustard	mitochondrion	19.33	25.72
PGSC0003DMT400025087	Potato	endoplasmic reticulum	15.25	25.66
Solyc04g080120.1.1	Tomato	extracellular	18.85	25.65
AT3G16710.1	Thale cress	mitochondrion	15.61	25.64
Bra031731.1-P	Field mustard	mitochondrion	15.49	25.39
KRH09097	Soybean	plastid	17.77	25.39
AT1G64580.1	Thale cress	mitochondrion	15.85	25.24
CDX68679	Canola	cytosol	3.48	25.22
AT1G62914.1	Thale cress	mitochondrion	15.97	25.19
PGSC0003DMT400056665	Potato	mitochondrion	17.77	25.13
AT1G12700.2	Thale cress	cytosol	18.61	25.08
Bra026836.1-P	Field mustard	cytosol, mitochondrion	14.77	25.05
PGSC0003DMT400053182	Potato	cytosol	18.01	25.04
Bra026957.1-P	Field mustard	mitochondrion	18.13	25.04
PGSC0003DMT400015293	Potato	mitochondrion	18.13	24.75
PGSC0003DMT400015298	Potato	mitochondrion	18.13	24.75
AT1G62720.1	Thale cress	mitochondrion	14.41	24.74
Solyc06g007300.1.1	Tomato	extracellular	17.41	24.49
PGSC0003DMT400056663	Potato	plastid	17.29	24.49
AT1G62680.2	Thale cress	plastid	16.09	24.45
PGSC0003DMT400052971	Potato	mitochondrion	17.29	24.28
PGSC0003DMT400008760	Potato	mitochondrion	16.93	24.06
AT5G41170.1	Thale cress	mitochondrion	15.13	23.91
AT1G64583.1	Thale cress	mitochondrion	14.53	23.63
KRH08599	Soybean	cytosol, plastid	18.85	23.47
Bra027726.1-P	Field mustard	mitochondrion	13.21	23.35
Bra026401.1-P	Field mustard	plastid	14.89	23.18
VIT_14s0030g02260.t01	Wine grape	cytosol	12.24	23.02
AT1G06580.1	Thale cress	mitochondrion	13.81	23.0
PGSC0003DMT400053556	Potato	mitochondrion	12.61	22.88
AT4G26800.2	Thale cress	mitochondrion, plastid	14.05	22.76
AT1G64100.2	Thale cress	cytosol	21.25	21.96
KRH09085	Soybean	mitochondrion	18.49	21.88
Bra027656.1-P	Field mustard	cytosol	22.09	19.55
KRH12873	Soybean	cytosol	15.73	18.82
KRH39064	Soybean	cytosol	20.17	17.34
Bra016758.1-P	Field mustard	plastid	19.93	14.32

Protein Annotations

EnsemblPlants:HORVU1Hr1G014040.1	EnsemblPlantsGene:HORVU1Hr1G014040	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF874
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	UniParc:UPI000B46261D	UniProt:A0A287EPH5	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr1H:+:38766512..38770123

Molecular Weight (calculated)

91531.1 Da

IEP (calculated)

9.053

GRAVY (calculated)

0.024

Length

833 amino acids

Sequence
(BLAST)

001: MSSIRLRLRI RIRRHHSSTT PMSLVSLRGR LSSSTSTSPP SSSWSPHAAF AAATERVRAG TLSPQDAHRL FDELLHQVTP VPERSLAGFL AALGRAAPSE
101: ACRDGPALVL SLFNRVCREE AGMRVAPPTI FTYGVVMNCC CRARRPELGL AFFGRLLRTG LKTNEVVANT VLKCLCCAKL TDEAVNMLLH RMSGPGCVPD
201: AFSYNTVLKS LCEDSRSQRA LDLLLVMAKE GGVCSPNVVT YSTVIHGFFK EGKIGKACKL FHEMKQRGVV PDVVTHNSII NALCKARAMD KARFFLRQMV
301: DSGVPPNKVT YASMVHGYST LGRWKEATKM LREMTSRGLP PNIVTWNSFM DSLCKHGRSK EAAEIFFSMA ARGHKPDTVS YAILLHGYAN EGNFGDMMSL
401: FNSMEGNGIV ATSYVFNILI DAYAKRGMMD EAMLILTEML GQGLNPNVVT YSSLISALCR MGKLTDAMDK FSQMIGTGVQ PNKVVYQSLI QGFCTHGDLG
501: KAKELVYEMM KKGIPCPNIA FFGSIVDSLC KEGRVMDAHH IFDLVKDIGE RPDNIIFSML IDGYCLVGDM GKAFRVLDAM VSAGIEPDVV AYSTLVNGYC
601: RSGRIDDGLN LFREMSDKKI KPTTVTYNIM LEGLFRARRT VAAKKMLHEM IGSGTIVSIS TCNIILRGLS RNNCADEAIV LFQKLHAMNV KFNITTLNTM
701: INVLYKVQRR EEANDLFAAL PASGLVPNAS TYGVMLRNLL KEGAVEEADS MFSSMEKSGC APSSRLINDV IRILLEKGEI VKAGKYMSKV DGKSISLEAS
801: TCSLLLSLFS GNGKYQEQIQ LLPAKYQFFD GIS

Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)

001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.