Factsheet for PGSC0003DMT400008759

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	PGSC0003DMT400037344	AT4G26630.1	25387881
AT1G62670.1	PGSC0003DMT400057390	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g007810.1.1	Tomato	cytosol	68.34	81.34
PGSC0003DMT400052977	Potato	cytosol	73.04	59.9
PGSC0003DMT400008757	Potato	cytosol	82.45	52.81
PGSC0003DMT400056665	Potato	mitochondrion	89.03	48.22
PGSC0003DMT400025067	Potato	cytosol	69.91	46.85
PGSC0003DMT400008760	Potato	mitochondrion	85.27	46.42
PGSC0003DMT400025087	Potato	endoplasmic reticulum	71.79	46.26
PGSC0003DMT400056663	Potato	plastid	84.95	46.09
PGSC0003DMT400025074	Potato	cytosol	73.98	42.75
PGSC0003DMT400052971	Potato	mitochondrion	73.04	39.29
PGSC0003DMT400053185	Potato	mitochondrion	71.47	38.64
CDY26589	Canola	cytosol	8.15	37.68
PGSC0003DMT400053556	Potato	mitochondrion	52.35	36.38
PGSC0003DMT400053182	Potato	cytosol	66.77	35.56
CDY09968	Canola	cytosol	30.72	33.33
CDY06217	Canola	cytosol	30.09	32.76
Bra006187.1-P	Field mustard	plastid	29.47	32.3
VIT_14s0030g02260.t01	Wine grape	cytosol	43.26	31.15
CDY16033	Canola	cytosol	14.42	30.67
Bra027636.1-P	Field mustard	cytosol	30.72	30.25
Bra027029.1-P	Field mustard	mitochondrion	22.57	29.63
VIT_14s0081g00110.t01	Wine grape	cytosol	42.95	27.9
CDY51169	Canola	cytosol	36.99	27.9
PGSC0003DMT400015293	Potato	mitochondrion	52.66	27.54
PGSC0003DMT400015298	Potato	mitochondrion	52.66	27.54
Bra026884.1-P	Field mustard	cytosol	38.87	27.02
CDY16110	Canola	extracellular	34.17	26.59
CDY39810	Canola	cytosol	31.35	25.58
Bra036649.1-P	Field mustard	cytosol	31.03	25.32
CDY03257	Canola	cytosol	31.03	25.32
CDY46909	Canola	mitochondrion	22.88	25.0
CDY34688	Canola	cytosol	28.21	24.86
Bra026836.1-P	Field mustard	cytosol, mitochondrion	36.68	23.83
KRH09256	Soybean	mitochondrion	41.69	23.79
KRH70370	Soybean	cytosol	40.44	23.71
VIT_12s0028g02320.t01	Wine grape	mitochondrion	35.42	23.69
Bra026882.1-P	Field mustard	cytosol	39.5	23.6
VIT_14s0081g00270.t01	Wine grape	plastid	42.32	23.28
CDX67634	Canola	cytosol	30.72	23.17
CDX71969	Canola	cytosol	28.53	22.98
VIT_14s0081g00120.t01	Wine grape	plastid	41.69	22.81
KRH38755	Soybean	mitochondrion	41.69	22.39
CDY15970	Canola	cytosol	6.58	22.34
CDY16002	Canola	cytosol	21.63	22.19
KRH49698	Soybean	cytosol	39.5	22.11
CDY33753	Canola	mitochondrion	30.72	22.07
CDY16031	Canola	cytosol	21.32	21.86
VIT_14s0081g00280.t01	Wine grape	mitochondrion	43.26	21.6
CDY33797	Canola	mitochondrion	34.48	21.48
CDY26607	Canola	cytosol	30.41	21.23
KRH75045	Soybean	mitochondrion	39.19	20.94
Bra026958.1-P	Field mustard	mitochondrion	41.69	20.88
CDY66357	Canola	cytosol	24.76	20.84
Bra025516.1-P	Field mustard	cytosol, mitochondrion	31.03	20.75
Bra031731.1-P	Field mustard	mitochondrion	32.92	20.67
KRH75048	Soybean	mitochondrion	39.19	20.56
KRH75063	Soybean	mitochondrion, plastid	38.87	20.53
CDX69436	Canola	plastid	31.97	20.48
CDY08386	Canola	cytosol	28.53	20.45
AT5G16640.1	Thale cress	mitochondrion	32.29	20.44
AT1G62720.1	Thale cress	mitochondrion	31.03	20.41
CDY48949	Canola	mitochondrion	30.72	20.37
CDY26588	Canola	extracellular	20.69	20.37
CDY34969	Canola	mitochondrion	32.29	20.36
AT3G22470.1	Thale cress	cytosol, mitochondrion	39.5	20.36
AT1G12620.1	Thale cress	cytosol, mitochondrion	39.5	20.29
Bra021192.1-P	Field mustard	plastid	31.97	20.24
Bra026957.1-P	Field mustard	mitochondrion	38.24	20.23
AT1G62930.1	Thale cress	plastid	39.81	20.19
CDY46394	Canola	mitochondrion	30.41	20.17
AT3G16710.1	Thale cress	mitochondrion	31.97	20.12
AT1G12700.2	Thale cress	cytosol	38.56	19.9
AT1G63330.2	Thale cress	cytosol	34.8	19.86
KRH42744	Soybean	mitochondrion	37.93	19.8
KRH58843	Soybean	nucleus	37.93	19.8
AT1G12300.1	Thale cress	mitochondrion	39.5	19.78
CDY25492	Canola	mitochondrion	30.41	19.76
AT5G41170.1	Thale cress	mitochondrion	32.6	19.73
CDY31272	Canola	mitochondrion	35.11	19.72
CDY35831	Canola	mitochondrion	31.66	19.61
CDY49646	Canola	mitochondrion	30.72	19.56
AT1G64583.1	Thale cress	mitochondrion	31.35	19.53
AT1G62670.1	Thale cress	mitochondrion	38.56	19.52
VIT_14s0030g02280.t01	Wine grape	plastid	34.17	19.43
Bra026971.1-P	Field mustard	mitochondrion	38.24	19.4
CDY34375	Canola	mitochondrion	31.35	19.34
AT1G64580.1	Thale cress	mitochondrion	31.66	19.31
TraesCS6B01G114300.1	Wheat	cytosol	23.51	19.28
Bra028267.1-P	Field mustard	mitochondrion	37.62	19.17
Bra027658.1-P	Field mustard	cytosol, mitochondrion	32.6	19.15
Bra016762.1-P	Field mustard	mitochondrion	36.36	19.11
CDY68929	Canola	mitochondrion	36.36	19.11
Bra027726.1-P	Field mustard	mitochondrion	28.21	19.11
AT1G63080.3	Thale cress	mitochondrion	36.68	19.06
AT1G63130.1	Thale cress	mitochondrion	37.3	18.89
AT1G62910.1	Thale cress	mitochondrion	37.3	18.83
CDY00489	Canola	mitochondrion	34.48	18.77
Bra026954.1-P	Field mustard	mitochondrion	38.24	18.77
AT1G63150.1	Thale cress	mitochondrion	36.99	18.76
CDY26593	Canola	cytosol	35.74	18.72
CDY65983	Canola	mitochondrion	24.45	18.48
CDY66358	Canola	mitochondrion	22.57	18.46
CDY26565	Canola	mitochondrion	32.92	18.45
AT1G62680.2	Thale cress	plastid	31.66	18.43
CDY47835	Canola	mitochondrion	25.08	18.31
Os10t0501700-00	Rice	cytosol	26.02	18.28
TraesCS6A01G014600.1	Wheat	cytosol	22.57	18.23
AT1G06580.1	Thale cress	mitochondrion	28.53	18.2
AT1G12775.1	Thale cress	cytosol, mitochondrion	36.68	18.17
Bra027026.1-P	Field mustard	mitochondrion	29.78	18.16
AT1G63070.1	Thale cress	mitochondrion	33.54	18.14
Bra036651.1-P	Field mustard	mitochondrion	30.41	18.13
HORVU1Hr1G011250.1	Barley	cytosol	16.61	17.97
TraesCS1D01G058400.1	Wheat	cytosol	28.84	17.86
AT1G63400.1	Thale cress	cytosol, plastid	31.97	17.68
AT1G62590.1	Thale cress	mitochondrion	35.11	17.67
CDY28348	Canola	mitochondrion, plastid	32.92	17.56
CDY29251	Canola	mitochondrion	27.9	17.55
TraesCS6A01G083000.1	Wheat	cytosol	25.08	17.54
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	29.78	17.3
TraesCS2B01G126900.1	Wheat	cytosol	20.69	17.28
Bra026401.1-P	Field mustard	plastid	28.84	17.2
CDX89301	Canola	plastid	28.84	17.2
CDY31271	Canola	mitochondrion	26.02	17.08
TraesCS1D01G068700.1	Wheat	cytosol	23.2	16.86
TraesCS1B01G084800.1	Wheat	cytosol	24.45	16.81
CDY46912	Canola	mitochondrion	26.02	16.8
AT4G26800.2	Thale cress	mitochondrion, plastid	26.65	16.54
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.36	16.5
CDY25519	Canola	mitochondrion, plastid	32.92	16.43
TraesCS1A01G073700.1	Wheat	cytosol	19.75	16.36
TraesCS6B01G127200.1	Wheat	cytosol	17.24	15.99
HORVU0Hr1G035310.1	Barley	cytosol	28.53	15.64
TraesCS6D01G017800.1	Wheat	cytosol	26.02	15.46
TraesCS2B01G560300.1	Wheat	cytosol	27.27	15.29
KXG35774	Sorghum	cytosol, mitochondrion	22.57	15.22
AT1G62914.1	Thale cress	mitochondrion	25.08	15.15
TraesCS1B01G085400.1	Wheat	cytosol	30.09	14.98
TraesCS1D01G076700.1	Wheat	cytosol	15.67	14.97
OQU82833	Sorghum	cytosol	21.0	14.96
TraesCS2B01G559900.1	Wheat	cytosol	25.39	14.94
TraesCS1A01G056000.1	Wheat	cytosol	18.81	14.93
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	23.82	14.87
TraesCS1B01G038400.1	Wheat	cytosol	28.21	14.8
TraesCS1B01G039700.1	Wheat	cytosol	28.21	14.8
TraesCS7B01G469500.1	Wheat	cytosol	26.02	14.77
TraesCS1D01G056700.1	Wheat	cytosol	27.9	14.66
TraesCS6D01G017700.1	Wheat	plastid	24.45	14.61
TraesCS1D01G055300.1	Wheat	cytosol	28.21	14.56
TraesCS6B01G341800.2	Wheat	cytosol	18.18	14.54
Os10t0497366-00	Rice	mitochondrion	18.18	14.46
TraesCS1A01G054800.1	Wheat	cytosol	26.33	14.43
TraesCS1B01G073100.1	Wheat	cytosol	27.27	14.36
OQU82831	Sorghum	cytosol	27.59	14.36
TraesCS1B01G072700.1	Wheat	cytosol	22.88	14.31
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	16.93	14.29
TraesCS1B01G075300.1	Wheat	cytosol	26.65	14.24
KXG34536	Sorghum	mitochondrion	25.39	14.16
CDY25522	Canola	mitochondrion, plastid	19.44	13.87
TraesCS1D01G058000.1	Wheat	cytosol	17.55	13.79
AT1G64100.2	Thale cress	cytosol	34.8	13.77
TraesCS2A01G531100.1	Wheat	cytosol	24.45	13.71
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	28.53	13.7
HORVU1Hr1G018190.2	Barley	cytosol	12.23	13.68
KXG19780	Sorghum	cytosol	25.08	13.54
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	29.47	13.49
TraesCS1A01G031600.1	Wheat	cytosol	27.9	13.44
TraesCS1A01G067800.1	Wheat	cytosol	15.67	13.37
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.65	13.3
TraesCS1B01G038600.1	Wheat	cytosol	14.73	12.95
TraesCS1D01G069100.1	Wheat	mitochondrion	26.02	12.91
TraesCS1A01G067000.1	Wheat	mitochondrion	28.84	12.85
TraesCS2A01G531000.1	Wheat	golgi	27.27	12.81
EES07882	Sorghum	cytosol	31.03	12.74
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	26.65	12.63
Zm00001d007534_P001	Maize	plastid	30.72	12.61
TraesCS1D01G067600.1	Wheat	cytosol	14.42	12.6
CDY34370	Canola	cytosol	32.29	12.55
TraesCS1B01G038200.1	Wheat	mitochondrion	24.76	12.48
KXG27690	Sorghum	cytosol, plastid	28.53	12.45
TraesCS1A01G031700.1	Wheat	plastid	28.84	12.42
TraesCS1A01G057300.1	Wheat	cytosol	27.9	12.4
TraesCS1D01G033000.1	Wheat	cytosol	15.67	12.38
TraesCS1D01G076500.1	Wheat	mitochondrion	25.71	12.35
TraesCS6D01G083300.1	Wheat	mitochondrion	17.24	12.33
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	25.39	12.29
TraesCS1B01G072400.1	Wheat	cytosol	26.65	12.23
Os08t0107800-01	Rice	mitochondrion	23.82	12.18
TraesCS6B01G021600.1	Wheat	mitochondrion	27.27	12.15
CDX68680	Canola	mitochondrion	17.55	12.12
Zm00001d007555_P001	Maize	plastid	30.72	12.04
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	26.33	12.02
TraesCS6D01G290900.1	Wheat	mitochondrion	27.59	12.01
OQU80148	Sorghum	mitochondrion	27.27	11.97
Os10t0495100-01	Rice	cytosol, mitochondrion	17.24	11.93
Zm00001d007531_P001	Maize	plastid	30.41	11.92
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	26.65	11.9
TraesCS1A01G067700.1	Wheat	extracellular	12.54	11.87
TraesCS1B01G085900.1	Wheat	mitochondrion	30.09	11.79
Zm00001d007548_P001	Maize	plastid	30.09	11.79
EER95949	Sorghum	mitochondrion	24.45	11.76
TraesCS2D01G532500.1	Wheat	plastid	25.08	11.76
Zm00001d007559_P001	Maize	plastid	30.09	11.75
TraesCS2A01G526200.1	Wheat	golgi	25.08	11.75
TraesCS1B01G085300.1	Wheat	mitochondrion	29.15	11.74
KXG28799	Sorghum	plastid	27.9	11.71
TraesCS2D01G532100.1	Wheat	mitochondrion	25.39	11.71
TraesCS1A01G055600.1	Wheat	cytosol	11.91	11.69
EES09203	Sorghum	cytosol	29.15	11.65
HORVU6Hr1G014310.1	Barley	mitochondrion	25.08	11.64
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	17.55	11.64
Os10t0495200-01	Rice	mitochondrion	28.53	11.64
TraesCS1A01G067400.1	Wheat	mitochondrion	30.09	11.64
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	26.02	11.61
Os10t0497300-01	Rice	mitochondrion	28.84	11.59
CDX81633	Canola	extracellular, golgi, plasma membrane	32.92	11.55
TraesCS1D01G056200.1	Wheat	mitochondrion	29.78	11.52
TraesCS1B01G039100.1	Wheat	mitochondrion	28.21	11.49
TraesCS1A01G067600.1	Wheat	mitochondrion	29.15	11.44
TraesCS6D01G047700.1	Wheat	mitochondrion	24.76	11.43
TraesCS1A01G054500.1	Wheat	mitochondrion	27.9	11.41
TraesCS1B01G086000.1	Wheat	plastid	24.45	11.37
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	28.21	11.36
TraesCS1D01G068500.1	Wheat	mitochondrion	28.84	11.33
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	25.39	11.33
OQU88594	Sorghum	cytosol	18.5	11.3
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	17.87	11.29
TraesCS1B01G038500.1	Wheat	mitochondrion	27.9	11.27
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	29.15	11.2
TraesCS1D01G068900.1	Wheat	mitochondrion	28.53	11.19
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	25.08	11.19
OQU82856	Sorghum	cytosol	26.33	11.17
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	17.55	11.13
TraesCS2D01G532400.1	Wheat	cytosol	21.32	11.13
TraesCS1D01G068400.1	Wheat	mitochondrion	28.53	11.06
Bra027656.1-P	Field mustard	cytosol	32.6	11.05
TraesCS1D01G068800.1	Wheat	plastid	28.21	11.03
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	26.96	11.03
TraesCS6A01G311600.1	Wheat	mitochondrion	28.84	11.0
TraesCS1B01G071600.1	Wheat	mitochondrion	29.15	10.97
TraesCS1A01G054700.2	Wheat	mitochondrion	27.9	10.96
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	16.61	10.95
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	26.96	10.93
OQU82823	Sorghum	cytosol	27.27	10.92
Os08t0110200-01	Rice	mitochondrion	27.27	10.9
Bra016758.1-P	Field mustard	plastid	39.5	10.87
Os10t0499500-01	Rice	mitochondrion	17.24	10.87
Zm00001d018982_P001	Maize	mitochondrion	11.91	10.86
TraesCS1B01G092500.1	Wheat	mitochondrion	26.65	10.86
TraesCS6B01G127500.1	Wheat	cytosol	16.61	10.82
TraesCS2D01G532300.1	Wheat	plastid	26.33	10.8
OQU82827	Sorghum	cytosol	26.96	10.79
TraesCS1D01G057700.1	Wheat	cytosol	10.97	10.77
TraesCS6D01G083400.1	Wheat	mitochondrion	16.61	10.75
TraesCS2A01G530600.1	Wheat	cytosol	25.71	10.72
HORVU6Hr1G076780.7	Barley	mitochondrion	27.59	10.68
CDY34680	Canola	cytosol	30.41	10.64
TraesCS1B01G039200.1	Wheat	mitochondrion	26.02	10.59
HORVU0Hr1G031920.1	Barley	plastid	28.53	10.58
Zm00001d009733_P001	Maize	cytosol	26.33	10.57
HORVU1Hr1G014040.1	Barley	mitochondrion	27.59	10.56
HORVU1Hr1G010970.1	Barley	mitochondrion	27.27	10.53
HORVU1Hr1G004750.6	Barley	plastid	26.33	10.53
TraesCS2B01G560700.1	Wheat	plastid	25.39	10.51
OQU82836	Sorghum	cytosol	20.06	10.46
Os08t0248400-01	Rice	mitochondrion	14.42	10.45
TraesCSU01G089700.1	Wheat	mitochondrion	15.67	10.37
TraesCS2D01G532600.1	Wheat	plastid	25.08	10.31
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	14.11	10.25
TraesCS6D01G083100.1	Wheat	cytosol	15.67	10.2
TraesCS1D01G076900.1	Wheat	plastid	21.0	10.2
TraesCSU01G090200.1	Wheat	cytosol	14.11	10.18
HORVU1Hr1G013810.1	Barley	plastid	26.65	10.13
HORVU1Hr1G014060.1	Barley	plastid	28.21	10.11
TraesCS1B01G072900.2	Wheat	mitochondrion	27.59	10.08
HORVU1Hr1G011160.2	Barley	cytosol, plastid	27.9	9.94
HORVU6Hr1G002890.6	Barley	cytosol, plastid	24.76	9.94
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	23.82	9.92
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	22.26	9.9
TraesCS1B01G092600.1	Wheat	plastid	15.99	9.86
HORVU1Hr1G011150.1	Barley	cytosol, plastid	26.96	9.74
TraesCS1B01G072300.1	Wheat	plastid	17.24	9.68
Os04t0351333-00	Rice	cytosol	26.65	9.67
HORVU6Hr1G017870.2	Barley	mitochondrion	9.09	9.67
TraesCS6A01G015000.1	Wheat	mitochondrion	12.54	9.64
TraesCS1A01G055800.1	Wheat	mitochondrion	23.2	9.6
CDY31277	Canola	plastid	28.84	9.59
HORVU1Hr1G010890.5	Barley	cytosol	26.96	9.58
TraesCS2D01G532200.1	Wheat	cytosol	8.78	9.56
HORVU1Hr1G011300.3	Barley	plastid	27.27	9.46
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	12.54	9.24
TraesCS1D01G058500.1	Wheat	plastid	15.67	8.77
Zm00001d009735_P001	Maize	cytosol	26.65	8.74
TraesCS7D01G231400.1	Wheat	cytosol, plastid	10.97	8.68
CDY16032	Canola	mitochondrion	10.97	8.58
OQU88581	Sorghum	cytosol	27.9	8.19
TraesCS6D01G076500.1	Wheat	plastid	11.6	8.17
CDY34870	Canola	mitochondrion	7.21	8.01
TraesCS1B01G038300.1	Wheat	plastid	13.17	7.69
OQU82834	Sorghum	cytosol	23.2	7.68
TraesCS1B01G073200.1	Wheat	cytosol	6.9	7.26
Os08t0107700-01	Rice	cytosol, mitochondrion	7.52	6.42
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	9.4	6.25
HORVU1Hr1G011400.44	Barley	plastid	11.6	6.01
TraesCSU01G089800.1	Wheat	mitochondrion	6.27	5.7
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	6.58	5.54
TraesCS1D01G068600.1	Wheat	plastid	5.02	4.71
Os04t0349600-01	Rice	plastid	5.64	4.65
TraesCS1A01G073800.1	Wheat	mitochondrion	4.7	4.5
TraesCS1D01G076400.1	Wheat	cytosol	5.02	4.41
CDY16003	Canola	cytosol, plastid	5.33	4.35
TraesCS1A01G073600.1	Wheat	mitochondrion	5.33	4.34
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	3.76	3.69
OQU82832	Sorghum	cytosol	3.13	3.5
TraesCS1D01G057800.1	Wheat	mitochondrion	3.13	2.75
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	2.51	2.34
TraesCS1B01G315500.1	Wheat	mitochondrion	2.19	2.18
TraesCS1A01G074000.1	Wheat	mitochondrion	0.63	0.71
TraesCS1A01G055500.1	Wheat	mitochondrion	0.31	0.46
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	0.31	0.44
CDY21063	Canola	plastid	0.0	0.0
Os10t0497432-01	Rice	mitochondrion	0.0	0.0
TraesCS1A01G066600.1	Wheat	mitochondrion	0.0	0.0
TraesCS1D01G056600.1	Wheat	mitochondrion	0.0	0.0
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	0.0	0.0
TraesCS6B01G129100.1	Wheat	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400008759	EnsemblPlantsGene:PGSC0003DMG400003402	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	ncoils:Coil	PANTHER:PTHR44149
PANTHER:PTHR44149:SF3	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PGSC:PGSC0003DMG400003402	SUPFAM:SSF81901
TIGRFAMs:TIGR00756	UniParc:UPI000296263B	UniProt:M0ZV14	MapMan:35.1	:	:

Description

PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003402]

Coordinates

chr6:+:2284075..2288419

Molecular Weight (calculated)

36226.4 Da

IEP (calculated)

5.307

GRAVY (calculated)

-0.111

Length

319 amino acids

Sequence
(BLAST)

001: MVNLNMYPDV RTFTILTDGL CKEGKIEDAE EVMKHMVEKG VEPNVITYNV IMDGYCLRGQ LDRARRIFDI LIDKGIEPNI FTYNILINGY CKKKKLAEAM
101: QLFCEISQKG SKPNIVTYNT ILQGLFEVGR IGVANQLFVE MVSTGPVPNL SIYHTLLDGY FKYGLVEEAM SLFNKLEKNK ENIDIESYNI IINGLSKNGE
201: LNKARAIFEK LSSMGLLVNV RTYTTMITGF CLQGLLDEAK DMLREIEENG CFPNNVTYNV IVRGYLRCRK INEMVTLMKE MTGRGFSFDA TTAELLVKDI
301: SENPSILDMI PELHAENKK

Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)

001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.