CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG98502
KRG98507
KRH46360
KRH46364

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	KRG98502	AT4G26630.1	25387881
AT1G62670.1	KRG98507	AT4G26630.1	25387881
AT1G62670.1	KRH46360	AT4G26630.1	25387881
AT1G62670.1	KRH46364	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09256	Soybean	mitochondrion	83.0	88.19
KRH70370	Soybean	cytosol	50.17	54.78
KRH49698	Soybean	cytosol	51.52	53.68
KRH58843	Soybean	nucleus	54.71	53.19
KRH42744	Soybean	mitochondrion	54.55	53.03
KRH75048	Soybean	mitochondrion	53.7	52.47
KRH75045	Soybean	mitochondrion	52.69	52.43
KRH75063	Soybean	mitochondrion, plastid	52.86	51.99
VIT_12s0028g02320.t01	Wine grape	mitochondrion	35.19	43.82
Bra027636.1-P	Field mustard	cytosol	23.4	42.9
CDY03257	Canola	cytosol	28.11	42.71
KRH39057	Soybean	cytosol	35.52	42.45
CDY39810	Canola	cytosol	27.78	42.2
KRH39072	Soybean	cytosol	35.19	42.14
KRH39074	Soybean	cytosol	35.19	42.05
Bra036649.1-P	Field mustard	cytosol	27.61	41.94
KRH39054	Soybean	cytosol	35.02	41.85
PGSC0003DMT400008759	Potato	cytosol	22.39	41.69
KRH39004	Soybean	cytosol	34.85	41.65
KRH40513	Soybean	plastid	24.58	41.6
VIT_14s0081g00110.t01	Wine grape	cytosol	34.34	41.55
CDY09968	Canola	cytosol	20.54	41.5
VIT_14s0081g00270.t01	Wine grape	plastid	40.4	41.38
KRH39112	Soybean	cytosol	34.34	41.05
CDY06217	Canola	cytosol	20.03	40.61
VIT_14s0081g00120.t01	Wine grape	plastid	39.73	40.48
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	35.69	40.38
PGSC0003DMT400052977	Potato	cytosol	26.09	39.85
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	33.84	39.8
Solyc06g005220.2.1	Tomato	cytosol	27.1	39.66
Solyc06g007280.2.1	Tomato	cytosol	17.0	39.61
CDY51169	Canola	cytosol	28.11	39.48
CDY46909	Canola	mitochondrion	19.19	39.04
KRH08636	Soybean	cytosol	34.18	38.89
CDX67634	Canola	cytosol	27.61	38.77
Bra027029.1-P	Field mustard	mitochondrion	15.66	38.27
KRH08628	Soybean	plastid	35.52	38.22
KRH08639	Soybean	mitochondrion, plastid	36.03	37.88
KRH08277	Soybean	plastid	36.03	37.74
KRH39066	Soybean	cytosol	35.19	37.66
KRH48615	Soybean	mitochondrion	34.51	37.61
KRH08671	Soybean	cytosol, mitochondrion	35.02	37.61
Bra006187.1-P	Field mustard	plastid	18.35	37.46
CDY16033	Canola	cytosol	9.43	37.33
AT1G62720.1	Thale cress	mitochondrion	30.47	37.32
KRH09154	Soybean	mitochondrion	34.85	37.23
PGSC0003DMT400025067	Potato	cytosol	29.8	37.18
PGSC0003DMT400025087	Potato	endoplasmic reticulum	30.81	36.97
CDX71969	Canola	cytosol	24.58	36.87
PGSC0003DMT400008757	Potato	cytosol	30.81	36.75
CDY08386	Canola	cytosol	27.44	36.63
CDX69436	Canola	plastid	30.64	36.55
CDY26607	Canola	cytosol	28.11	36.54
KRH08607	Soybean	cytosol	34.51	36.54
KRH09084	Soybean	plastid	31.31	36.4
KRH40400	Soybean	plastid	35.35	36.4
Bra026884.1-P	Field mustard	cytosol	28.11	36.38
AT1G63330.2	Thale cress	cytosol	34.18	36.31
VIT_14s0081g00280.t01	Wine grape	mitochondrion	39.06	36.31
Solyc06g007810.1.1	Tomato	cytosol	16.33	36.19
Solyc06g007300.1.1	Tomato	extracellular	36.03	36.15
KRH17148	Soybean	mitochondrion	33.16	36.15
AT5G16640.1	Thale cress	mitochondrion	30.64	36.11
CDY16110	Canola	extracellular	24.92	36.1
CDY65983	Canola	mitochondrion	25.59	36.02
CDY16002	Canola	cytosol	18.86	36.01
VIT_14s0030g02280.t01	Wine grape	plastid	34.01	36.01
CDY34969	Canola	mitochondrion	30.64	35.97
KRH08625	Soybean	plastid	34.85	35.94
Bra021192.1-P	Field mustard	plastid	30.47	35.91
KRH39050	Soybean	mitochondrion	32.15	35.9
CDY49646	Canola	mitochondrion	30.13	35.73
Bra036651.1-P	Field mustard	mitochondrion	32.15	35.7
Bra025516.1-P	Field mustard	cytosol, mitochondrion	28.62	35.64
PGSC0003DMT400025074	Potato	cytosol	33.0	35.51
Bra026957.1-P	Field mustard	mitochondrion	36.03	35.49
CDY16031	Canola	cytosol	18.52	35.37
CDY34688	Canola	cytosol	21.55	35.36
CDY46394	Canola	mitochondrion	28.62	35.34
PGSC0003DMT400008760	Potato	mitochondrion	34.68	35.15
CDY48949	Canola	mitochondrion	28.45	35.14
KRH41817	Soybean	mitochondrion	32.83	35.14
AT3G22470.1	Thale cress	cytosol, mitochondrion	36.53	35.06
Solyc06g007740.1.1	Tomato	cytosol	34.68	34.92
PGSC0003DMT400052971	Potato	mitochondrion	34.85	34.91
AT1G62680.2	Thale cress	plastid	32.15	34.85
Bra026882.1-P	Field mustard	cytosol	31.31	34.83
CDY26589	Canola	cytosol	4.04	34.78
CDY68929	Canola	mitochondrion	35.52	34.76
PGSC0003DMT400053185	Potato	mitochondrion	34.51	34.75
PGSC0003DMT400056663	Potato	plastid	34.34	34.69
AT1G63080.3	Thale cress	mitochondrion	35.86	34.69
Bra031731.1-P	Field mustard	mitochondrion	29.63	34.65
CDY31272	Canola	mitochondrion	33.0	34.51
CDY00489	Canola	mitochondrion	34.01	34.47
AT1G62914.1	Thale cress	mitochondrion	30.64	34.47
KRH09121	Soybean	mitochondrion	30.98	34.46
Bra016762.1-P	Field mustard	mitochondrion	35.19	34.43
AT1G62910.1	Thale cress	mitochondrion	36.53	34.34
AT1G12620.1	Thale cress	cytosol, mitochondrion	35.86	34.3
PGSC0003DMT400056665	Potato	mitochondrion	34.01	34.3
AT1G63130.1	Thale cress	mitochondrion	36.36	34.29
Bra028267.1-P	Field mustard	mitochondrion	36.03	34.19
AT1G63150.1	Thale cress	mitochondrion	36.2	34.18
CDY26593	Canola	cytosol	35.02	34.15
AT3G16710.1	Thale cress	mitochondrion	29.12	34.12
KRH25652	Soybean	cytosol, golgi	30.98	34.07
Bra026958.1-P	Field mustard	mitochondrion	36.53	34.07
Bra026971.1-P	Field mustard	mitochondrion	36.03	34.02
CDY25492	Canola	mitochondrion	28.11	34.01
AT1G06580.1	Thale cress	mitochondrion	28.62	34.0
CDY33797	Canola	mitochondrion	29.29	33.98
AT1G62670.1	Thale cress	mitochondrion	36.03	33.97
CDY26588	Canola	extracellular	18.52	33.95
AT1G12300.1	Thale cress	mitochondrion	36.36	33.91
AT1G62930.1	Thale cress	plastid	35.86	33.86
CDY46912	Canola	mitochondrion	28.11	33.81
AT5G41170.1	Thale cress	mitochondrion	29.97	33.78
Bra027026.1-P	Field mustard	mitochondrion	29.63	33.65
KRH09097	Soybean	plastid	33.0	33.62
CDY26565	Canola	mitochondrion	32.15	33.57
AT1G12700.2	Thale cress	cytosol	34.85	33.5
CDY34870	Canola	mitochondrion	16.16	33.45
KRH09095	Soybean	plastid	32.83	33.33
AT1G64580.1	Thale cress	mitochondrion	29.29	33.27
AT1G64583.1	Thale cress	mitochondrion	28.62	33.2
AT1G63400.1	Thale cress	cytosol, plastid	32.15	33.1
KRH09082	Soybean	cytosol	22.73	33.09
AT1G62590.1	Thale cress	mitochondrion	35.19	32.97
Solyc04g080120.1.1	Tomato	extracellular	33.84	32.84
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	30.3	32.79
Bra026954.1-P	Field mustard	mitochondrion	35.86	32.77
CDY34375	Canola	mitochondrion	28.45	32.69
PGSC0003DMT400015293	Potato	mitochondrion	33.33	32.46
PGSC0003DMT400015298	Potato	mitochondrion	33.33	32.46
CDY31271	Canola	mitochondrion	26.43	32.3
AT1G12775.1	Thale cress	cytosol, mitochondrion	35.02	32.3
AT1G63070.1	Thale cress	mitochondrion	31.99	32.2
Bra027658.1-P	Field mustard	cytosol, mitochondrion	29.29	32.04
Bra027726.1-P	Field mustard	mitochondrion	25.25	31.85
CDY35831	Canola	mitochondrion	27.61	31.84
CDY33753	Canola	mitochondrion	23.74	31.76
CDY47835	Canola	mitochondrion	23.23	31.58
PGSC0003DMT400053182	Potato	cytosol	31.65	31.39
CDY66358	Canola	mitochondrion	20.54	31.28
CDY29251	Canola	mitochondrion	26.6	31.16
Bra026836.1-P	Field mustard	cytosol, mitochondrion	25.76	31.16
PGSC0003DMT400053556	Potato	mitochondrion	24.07	31.15
VIT_14s0030g02260.t01	Wine grape	cytosol	23.23	31.15
AT4G26800.2	Thale cress	mitochondrion, plastid	26.94	31.13
CDY28348	Canola	mitochondrion, plastid	31.14	30.94
KRH31646	Soybean	cytosol	26.77	30.7
Bra026401.1-P	Field mustard	plastid	27.44	30.47
CDX89301	Canola	plastid	27.27	30.28
CDY25522	Canola	mitochondrion, plastid	22.73	30.2
CDY16032	Canola	mitochondrion	20.71	30.15
CDY25519	Canola	mitochondrion, plastid	31.65	29.42
CDY16003	Canola	cytosol, plastid	18.86	28.64
KRH08599	Soybean	cytosol, plastid	32.15	28.55
KRH09085	Soybean	mitochondrion	33.0	27.84
CDX68680	Canola	mitochondrion	20.88	26.84
CDY66357	Canola	cytosol	16.5	25.86
AT1G64100.2	Thale cress	cytosol	34.85	25.68
CDY34370	Canola	cytosol	31.99	23.14
KRH39064	Soybean	cytosol	36.53	22.39
CDX81633	Canola	extracellular, golgi, plasma membrane	33.84	22.11
CDY15970	Canola	cytosol	3.37	21.28
Bra027656.1-P	Field mustard	cytosol	32.32	20.4
Bra016758.1-P	Field mustard	plastid	35.86	18.38
KRH12873	Soybean	cytosol	21.21	18.1
CDY31277	Canola	plastid	27.61	17.1
CDY34680	Canola	cytosol	22.56	14.69
CDY21063	Canola	plastid	1.18	1.28

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100818857	MapMan:35.1	EMBL:ACUP02005872	EnsemblPlantsGene:GLYMA_09G156000	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	UniProt:K7LE47	EnsemblPlants:KRH38755	ProteinID:KRH38755	ProteinID:KRH38755.1
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1594	InterPro:Pentatricopeptide_repeat
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0002338A1B	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:37921744..37926646

Molecular Weight (calculated)

65633.2 Da

IEP (calculated)

7.371

GRAVY (calculated)

0.230

Length

594 amino acids

Sequence
(BLAST)

001: MLLRFHRTAS TSRLHPLITS LFYSHPFSTS PPPISDAAHR TLLLNSIRTL ETADAVVAVD FFHRMLTLTP FPCIQDFNLL FGLVAKSQHY ATAISLIKIL
101: HSLGDGSADV CTLNIAINCL CHMRKTTLGF AVLGLMTKIG LEPTLVTLNT IVNGLCIEGD VNHALWLVEK MENLGYHCNA RTYGALVNGL CKIGDTSGAL
201: ECLKKMVKRN LGPNVVVYNA ILDGLCKRGL VGEALGLLHE MGVVNVEPNV VTYNCLIQGL CGEFGGWREG VGLFNEMVAE KGIVPDVQTF SILVDGFCKE
301: GLLLRAESVV GFMVRIGVEP NVVTYNSLIA GYCLRSQMEE AMRVFGLMVR EGEGCLPSVV THNSLIHGWC KVKEVDKAMS LLSEMVGKGL DPDVFTWTSL
401: IGGFCEVKKP LAARELFFTM KEHGQVPNLQ TCAVVLDGLL KCWLDSEAVT LFRAMMKSGL DLDIVIYNIM LDGMCKMGKL NDARKLLSCV LVKGLKIDSY
501: TYNIMIKGLC REGLLDDAEE LLRKMKENGC PPNKCSYNVF VQGLLRKYDI ARSRKYLQIM KDKGFPVDAT TAELLIRFLS ANEEDKSFKE FPQI

Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)

001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS

Arabidopsis Description

ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.