CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG98502
KRG98507
KRH46360
KRH46364

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	KRG98502	AT4G26630.1	25387881
AT1G62670.1	KRG98507	AT4G26630.1	25387881
AT1G62670.1	KRH46360	AT4G26630.1	25387881
AT1G62670.1	KRH46364	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75045	Soybean	mitochondrion	95.56	97.32
KRH75063	Soybean	mitochondrion, plastid	89.64	90.23
KRH70370	Soybean	cytosol	62.34	69.67
KRH49698	Soybean	cytosol	63.16	67.37
KRH09256	Soybean	mitochondrion	50.82	55.28
KRH38755	Soybean	mitochondrion	52.47	53.7
KRH42744	Soybean	mitochondrion	53.78	53.52
KRH58843	Soybean	nucleus	53.62	53.36
VIT_12s0028g02320.t01	Wine grape	mitochondrion	36.02	45.91
VIT_14s0081g00270.t01	Wine grape	plastid	39.8	41.72
CDY09968	Canola	cytosol	19.74	40.82
VIT_14s0081g00110.t01	Wine grape	cytosol	32.89	40.73
CDY06217	Canola	cytosol	19.57	40.61
PGSC0003DMT400008757	Potato	cytosol	33.06	40.36
Bra027636.1-P	Field mustard	cytosol	21.22	39.81
VIT_14s0081g00120.t01	Wine grape	plastid	37.99	39.62
Solyc06g007810.1.1	Tomato	cytosol	17.43	39.55
PGSC0003DMT400008759	Potato	cytosol	20.56	39.19
CDX71969	Canola	cytosol	25.49	39.14
PGSC0003DMT400052977	Potato	cytosol	24.84	38.82
CDY51169	Canola	cytosol	26.97	38.77
Bra026882.1-P	Field mustard	cytosol	34.05	38.76
KRH39057	Soybean	cytosol	31.41	38.43
Solyc06g005220.2.1	Tomato	cytosol	25.66	38.42
KRH39072	Soybean	cytosol	31.25	38.31
CDX67634	Canola	cytosol	26.64	38.3
CDY16031	Canola	cytosol	19.57	38.26
CDY03257	Canola	cytosol	24.51	38.11
CDY16033	Canola	cytosol	9.38	38.0
CDY33797	Canola	mitochondrion	31.91	37.89
KRH39054	Soybean	cytosol	30.76	37.63
KRH39074	Soybean	cytosol	30.76	37.63
Bra036649.1-P	Field mustard	cytosol	24.18	37.6
Bra027029.1-P	Field mustard	mitochondrion	14.97	37.45
VIT_14s0030g02280.t01	Wine grape	plastid	34.54	37.43
KRH39004	Soybean	cytosol	30.59	37.42
CDY39810	Canola	cytosol	24.01	37.34
CDY16110	Canola	extracellular	25.16	37.32
VIT_14s0081g00280.t01	Wine grape	mitochondrion	38.98	37.09
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	30.76	37.03
CDY16002	Canola	cytosol	18.91	36.98
PGSC0003DMT400025087	Potato	endoplasmic reticulum	30.1	36.97
PGSC0003DMT400025074	Potato	cytosol	33.55	36.96
Bra026884.1-P	Field mustard	cytosol	27.8	36.82
Bra031731.1-P	Field mustard	mitochondrion	30.76	36.81
CDY31272	Canola	mitochondrion	34.38	36.8
KRH08636	Soybean	cytosol	31.58	36.78
CDY26607	Canola	cytosol	27.63	36.76
KRH40513	Soybean	plastid	21.22	36.75
AT3G22470.1	Thale cress	cytosol, mitochondrion	37.34	36.67
CDY46909	Canola	mitochondrion	17.6	36.64
KRH39112	Soybean	cytosol	29.93	36.62
CDY65983	Canola	mitochondrion	25.33	36.49
CDY68929	Canola	mitochondrion	36.35	36.41
Bra016762.1-P	Field mustard	mitochondrion	36.18	36.24
CDY26589	Canola	cytosol	4.11	36.23
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	31.25	36.19
AT1G63330.2	Thale cress	cytosol	33.22	36.14
PGSC0003DMT400025067	Potato	cytosol	28.29	36.13
Bra026958.1-P	Field mustard	mitochondrion	37.83	36.11
KRH08628	Soybean	plastid	32.73	36.05
AT1G63080.3	Thale cress	mitochondrion	36.35	35.99
Bra026957.1-P	Field mustard	mitochondrion	35.69	35.99
Solyc06g007300.1.1	Tomato	extracellular	35.03	35.98
AT1G12300.1	Thale cress	mitochondrion	37.66	35.95
Bra021192.1-P	Field mustard	plastid	29.77	35.91
CDY34870	Canola	mitochondrion	16.94	35.89
AT1G62720.1	Thale cress	mitochondrion	28.62	35.88
CDY00489	Canola	mitochondrion	34.54	35.84
PGSC0003DMT400008760	Potato	mitochondrion	34.54	35.84
PGSC0003DMT400056665	Potato	mitochondrion	34.7	35.82
CDY26593	Canola	cytosol	35.86	35.8
KRH08671	Soybean	cytosol, mitochondrion	32.4	35.62
PGSC0003DMT400052971	Potato	mitochondrion	34.7	35.58
CDY08386	Canola	cytosol	25.99	35.51
Bra026971.1-P	Field mustard	mitochondrion	36.68	35.45
AT1G12620.1	Thale cress	cytosol, mitochondrion	36.18	35.43
CDY34969	Canola	mitochondrion	29.44	35.38
Bra028267.1-P	Field mustard	mitochondrion	36.35	35.3
Bra036651.1-P	Field mustard	mitochondrion	30.92	35.14
KRH08277	Soybean	plastid	32.73	35.1
AT1G62680.2	Thale cress	plastid	31.58	35.04
Bra025516.1-P	Field mustard	cytosol, mitochondrion	27.47	35.01
KRH41817	Soybean	mitochondrion	31.91	34.95
AT1G12700.2	Thale cress	cytosol	35.53	34.95
CDY46394	Canola	mitochondrion	27.63	34.93
Solyc06g007280.2.1	Tomato	cytosol	14.64	34.9
KRH08639	Soybean	mitochondrion, plastid	32.4	34.87
KRH09084	Soybean	plastid	29.28	34.83
CDY25492	Canola	mitochondrion	28.12	34.83
CDY26565	Canola	mitochondrion	32.57	34.8
CDY16026	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	31.41	34.79
AT5G16640.1	Thale cress	mitochondrion	28.78	34.72
KRH08625	Soybean	plastid	32.73	34.55
CDY34688	Canola	cytosol	20.56	34.53
PGSC0003DMT400056663	Potato	plastid	33.39	34.52
AT3G16710.1	Thale cress	mitochondrion	28.78	34.52
CDY48949	Canola	mitochondrion	27.3	34.51
KRH48615	Soybean	mitochondrion	30.92	34.5
PGSC0003DMT400053185	Potato	mitochondrion	33.39	34.41
Solyc06g007740.1.1	Tomato	cytosol	33.39	34.41
AT1G12775.1	Thale cress	cytosol, mitochondrion	36.35	34.32
CDY26588	Canola	extracellular	18.26	34.26
AT1G64580.1	Thale cress	mitochondrion	29.44	34.23
CDY31271	Canola	mitochondrion	27.3	34.16
Bra026954.1-P	Field mustard	mitochondrion	36.35	34.0
CDY49646	Canola	mitochondrion	27.96	33.93
AT1G63150.1	Thale cress	mitochondrion	35.03	33.86
KRH39050	Soybean	mitochondrion	29.61	33.83
AT1G63400.1	Thale cress	cytosol, plastid	32.07	33.8
AT1G62910.1	Thale cress	mitochondrion	35.03	33.7
KRH39066	Soybean	cytosol	30.76	33.69
AT1G63130.1	Thale cress	mitochondrion	34.87	33.65
AT5G41170.1	Thale cress	mitochondrion	29.11	33.59
CDX69436	Canola	plastid	27.47	33.53
KRH08607	Soybean	cytosol	30.92	33.51
Bra027026.1-P	Field mustard	mitochondrion	28.78	33.46
KRH09154	Soybean	mitochondrion	30.59	33.45
KRH40400	Soybean	plastid	31.74	33.45
AT1G06580.1	Thale cress	mitochondrion	27.47	33.4
KRH17148	Soybean	mitochondrion	29.93	33.39
AT1G63070.1	Thale cress	mitochondrion	32.24	33.22
Bra026836.1-P	Field mustard	cytosol, mitochondrion	26.81	33.2
CDY29251	Canola	mitochondrion	27.63	33.14
CDY16032	Canola	mitochondrion	22.2	33.09
CDY34375	Canola	mitochondrion	28.12	33.08
AT1G62930.1	Thale cress	plastid	34.21	33.07
PGSC0003DMT400015293	Potato	mitochondrion	33.06	32.95
PGSC0003DMT400015298	Potato	mitochondrion	33.06	32.95
AT1G62914.1	Thale cress	mitochondrion	28.45	32.77
CDY33753	Canola	mitochondrion	23.85	32.66
CDY35831	Canola	mitochondrion	27.63	32.62
AT1G64583.1	Thale cress	mitochondrion	27.47	32.62
Bra027658.1-P	Field mustard	cytosol, mitochondrion	29.11	32.6
CDY46912	Canola	mitochondrion	26.48	32.59
Bra026401.1-P	Field mustard	plastid	28.62	32.52
CDX89301	Canola	plastid	28.62	32.52
Solyc04g080120.1.1	Tomato	extracellular	32.73	32.52
AT1G62590.1	Thale cress	mitochondrion	33.88	32.49
KRH09097	Soybean	plastid	30.92	32.25
AT1G62670.1	Thale cress	mitochondrion	33.39	32.22
KRH09121	Soybean	mitochondrion	28.29	32.21
PGSC0003DMT400053182	Potato	cytosol	31.58	32.05
KRH25652	Soybean	cytosol, golgi	28.45	32.04
Bra027726.1-P	Field mustard	mitochondrion	24.51	31.63
Bra006187.1-P	Field mustard	plastid	15.13	31.62
PGSC0003DMT400053556	Potato	mitochondrion	23.85	31.59
AT4G26800.2	Thale cress	mitochondrion, plastid	26.48	31.32
KRH09095	Soybean	plastid	30.1	31.28
KRH31646	Soybean	cytosol	26.64	31.27
KRH09082	Soybean	cytosol	20.72	30.88
CDY66358	Canola	mitochondrion	19.74	30.77
CDY25522	Canola	mitochondrion, plastid	22.2	30.2
CDY47835	Canola	mitochondrion	21.55	29.98
CDY28348	Canola	mitochondrion, plastid	29.44	29.93
CDY25519	Canola	mitochondrion, plastid	30.92	29.42
CDY16003	Canola	cytosol, plastid	18.75	29.16
VIT_14s0030g02260.t01	Wine grape	cytosol	20.72	28.44
KRH08599	Soybean	cytosol, plastid	29.77	27.06
AT1G64100.2	Thale cress	cytosol	35.03	26.43
CDX68680	Canola	mitochondrion	20.07	26.41
KRH09085	Soybean	mitochondrion	30.43	26.28
CDY66357	Canola	cytosol	15.95	25.59
CDY15970	Canola	cytosol	3.78	24.47
CDX81633	Canola	extracellular, golgi, plasma membrane	34.7	23.21
CDY34370	Canola	cytosol	30.92	22.9
Bra027656.1-P	Field mustard	cytosol	31.25	20.19
KRH39064	Soybean	cytosol	32.07	20.12
Bra016758.1-P	Field mustard	plastid	37.5	19.67
CDY31277	Canola	plastid	28.29	17.94
KRH12873	Soybean	cytosol	18.42	16.09
CDY34680	Canola	cytosol	21.22	14.14
CDY21063	Canola	plastid	1.81	2.0

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:A0A0R0LE28	EMBL:ACUP02000111	EnsemblPlantsGene:GLYMA_01G059000	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	EnsemblPlants:KRH75048	ProteinID:KRH75048	ProteinID:KRH75048.1	PFAM:PF01535
PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1594	InterPro:Pentatricopeptide_repeat
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00023BB477	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:7790857..7792847

Molecular Weight (calculated)

68461.0 Da

IEP (calculated)

8.469

GRAVY (calculated)

0.055

Length

608 amino acids

Sequence
(BLAST)

001: MMMRRSSSIH GFPLLRYFAL SSNPTHFLLH PSHSSSTFST YVRDSDNHNH NNASINTRRA QFLDSMRNVK SVDVALDFYH KMVTMKPFPC VKDFNLLFGI
101: VAKMKHYTTA ISLIKHMSYI GVKPNVSTHN IVINCLCRLN HTVFGFSVLG LMFKIGVEPS IVTFTTIVNG LCVEGNVAQA IRFVDHLKDM GYESDRYTRG
201: AIINGLCKVG HSSAALSYLK KMEEQNCNLD VTAYSAVVDG LCKDGMVFEA LDLFSQMTGK GIQPNLFTYN CLIHGLCNFD RWKEAAPLLA NMMRKGIMPD
301: VQTFNVIAGR FLKTGMISRA KSIFSFMGHM GIEHNVVTYN SIIGAHCMLN QMKDAMEVFD LMIRKGCLPN IVTYNSLIHG WCETKNMNKA MYFLGEMVNN
401: GLDPDVVTWS TLIGGFCKAG KPVAAKELFF VMHKHGQLPD LQTCAIILDG LFKCHFHSEA MSLFRELEKM NSDLDIIIYS IILNGMCSSG KLNDALELFS
501: YLSSKGVKID VVTYNIMING LCKEGLLDDA EDLLMKMEEN GCPPDECTYN VFVQGLLRRY EISKSTKYLM FMKGKGFRAN ATTTKLLINY FSANKENRAF
601: QVFLQKFV

Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)

001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS

Arabidopsis Description

ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.