Factsheet for AT1G62680.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036651.1-P	Field mustard	mitochondrion	76.28	78.13
Bra027029.1-P	Field mustard	mitochondrion	33.58	75.72
CDY66358	Canola	mitochondrion	53.1	74.62
Bra027026.1-P	Field mustard	mitochondrion	68.8	72.08
CDY46909	Canola	mitochondrion	38.14	71.58
CDY46912	Canola	mitochondrion	63.87	70.85
AT1G62720.1	Thale cress	mitochondrion	52.37	59.18
AT5G16640.1	Thale cress	mitochondrion	53.1	57.74
AT3G16710.1	Thale cress	mitochondrion	50.0	54.04
AT1G64580.1	Thale cress	mitochondrion	51.28	53.73
AT1G06580.1	Thale cress	mitochondrion	48.91	53.6
AT5G41170.1	Thale cress	mitochondrion	50.91	52.94
AT1G63330.2	Thale cress	cytosol	53.28	52.24
AT1G63130.1	Thale cress	mitochondrion	59.67	51.9
AT1G63400.1	Thale cress	cytosol, plastid	54.56	51.82
AT1G63150.1	Thale cress	mitochondrion	59.31	51.67
AT1G63070.1	Thale cress	mitochondrion	55.47	51.53
AT1G62914.1	Thale cress	mitochondrion	49.63	51.52
AT1G62910.1	Thale cress	mitochondrion	59.12	51.27
AT1G62590.1	Thale cress	mitochondrion	58.76	50.79
AT1G62670.1	Thale cress	mitochondrion	58.21	50.63
AT1G63080.3	Thale cress	mitochondrion	56.39	50.33
AT1G62930.1	Thale cress	plastid	57.12	49.76
AT1G64583.1	Thale cress	mitochondrion	46.35	49.61
CDY66357	Canola	cytosol	34.12	49.34
AT4G26800.2	Thale cress	mitochondrion, plastid	44.71	47.67
AT3G22470.1	Thale cress	cytosol, mitochondrion	48.91	43.3
AT1G12300.1	Thale cress	mitochondrion	49.82	42.86
AT1G12620.1	Thale cress	cytosol, mitochondrion	48.18	42.51
AT1G12700.2	Thale cress	cytosol	47.45	42.07
AT1G12775.1	Thale cress	cytosol, mitochondrion	48.36	41.15
VIT_12s0028g02320.t01	Wine grape	mitochondrion	33.94	38.99
Solyc06g007280.2.1	Tomato	cytosol	16.06	34.51
VIT_14s0081g00270.t01	Wine grape	plastid	36.13	34.14
KRH70370	Soybean	cytosol	33.76	34.01
VIT_14s0081g00120.t01	Wine grape	plastid	36.13	33.96
PGSC0003DMT400052977	Potato	cytosol	23.91	33.68
KRH42744	Soybean	mitochondrion	36.86	33.06
KRH09256	Soybean	mitochondrion	33.58	32.92
KRH58843	Soybean	nucleus	36.68	32.9
KRH75045	Soybean	mitochondrion	35.77	32.83
PGSC0003DMT400025074	Potato	cytosol	32.85	32.61
KRH49698	Soybean	cytosol	33.76	32.46
Solyc06g005220.2.1	Tomato	cytosol	23.91	32.27
KRH38755	Soybean	mitochondrion	34.85	32.15
VIT_14s0081g00110.t01	Wine grape	cytosol	28.65	31.98
PGSC0003DMT400008757	Potato	cytosol	28.83	31.73
PGSC0003DMT400008759	Potato	cytosol	18.43	31.66
Solyc06g007300.1.1	Tomato	extracellular	34.12	31.59
KRH75048	Soybean	mitochondrion	35.04	31.58
VIT_14s0030g02280.t01	Wine grape	plastid	32.12	31.37
KRH75063	Soybean	mitochondrion, plastid	34.49	31.29
PGSC0003DMT400025087	Potato	endoplasmic reticulum	28.1	31.11
PGSC0003DMT400052971	Potato	mitochondrion	33.58	31.03
Solyc06g007810.1.1	Tomato	cytosol	15.15	30.97
Solyc06g007740.1.1	Tomato	cytosol	33.21	30.85
VIT_14s0081g00280.t01	Wine grape	mitochondrion	35.77	30.67
PGSC0003DMT400015293	Potato	mitochondrion	33.94	30.49
PGSC0003DMT400015298	Potato	mitochondrion	33.94	30.49
PGSC0003DMT400008760	Potato	mitochondrion	32.3	30.2
PGSC0003DMT400053556	Potato	mitochondrion	25.18	30.07
PGSC0003DMT400056663	Potato	plastid	31.75	29.59
Solyc04g080120.1.1	Tomato	extracellular	33.03	29.58
CDY34680	Canola	cytosol	49.09	29.5
PGSC0003DMT400025067	Potato	cytosol	25.55	29.41
PGSC0003DMT400056665	Potato	mitochondrion	31.57	29.37
PGSC0003DMT400053185	Potato	mitochondrion	31.57	29.32
AT1G64100.2	Thale cress	cytosol	42.7	29.03
PGSC0003DMT400053182	Potato	cytosol	30.47	27.88
HORVU1Hr1G011250.1	Barley	cytosol	14.96	27.8
VIT_14s0030g02260.t01	Wine grape	cytosol	22.45	27.77
TraesCS2B01G126900.1	Wheat	cytosol	17.15	24.61
Os10t0495100-01	Rice	cytosol, mitochondrion	20.07	23.86
KXG34536	Sorghum	mitochondrion	24.82	23.78
Zm00001d018982_P001	Maize	mitochondrion	15.15	23.71
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.77	23.57
OQU82832	Sorghum	cytosol	12.23	23.43
Os10t0501700-00	Rice	cytosol	19.16	23.13
Os10t0497366-00	Rice	mitochondrion	16.79	22.94
TraesCS6D01G083300.1	Wheat	mitochondrion	18.61	22.87
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	15.69	22.75
TraesCS1D01G058000.1	Wheat	cytosol	16.79	22.66
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	20.8	22.31
Os08t0248400-01	Rice	mitochondrion	17.88	22.27
EER95949	Sorghum	mitochondrion	26.82	22.17
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	19.53	22.11
Os08t0107800-01	Rice	mitochondrion	25.0	21.96
TraesCSU01G089700.1	Wheat	mitochondrion	19.16	21.78
HORVU1Hr1G018190.2	Barley	cytosol	11.31	21.75
Os10t0499500-01	Rice	mitochondrion	19.89	21.54
TraesCS6B01G127200.1	Wheat	cytosol	13.5	21.51
TraesCS6B01G127500.1	Wheat	cytosol	19.16	21.43
TraesCS6D01G083100.1	Wheat	cytosol	19.16	21.43
TraesCS1A01G067700.1	Wheat	extracellular	13.14	21.36
TraesCS6D01G083400.1	Wheat	mitochondrion	18.98	21.1
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	18.43	21.0
OQU88594	Sorghum	cytosol	19.89	20.88
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	19.16	20.87
TraesCS7B01G469500.1	Wheat	cytosol	21.35	20.82
TraesCS6A01G015000.1	Wheat	mitochondrion	15.69	20.72
HORVU6Hr1G017870.2	Barley	mitochondrion	11.31	20.67
KXG27690	Sorghum	cytosol, plastid	27.37	20.52
TraesCS6A01G083000.1	Wheat	cytosol	16.97	20.39
TraesCS6B01G114300.1	Wheat	cytosol	14.42	20.31
TraesCS1B01G038200.1	Wheat	mitochondrion	23.36	20.22
Os08t0107700-01	Rice	cytosol, mitochondrion	13.69	20.05
TraesCSU01G090200.1	Wheat	cytosol	16.06	19.91
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	15.88	19.82
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	18.07	19.6
TraesCS6D01G017700.1	Wheat	plastid	18.98	19.48
Os10t0495200-01	Rice	mitochondrion	27.74	19.44
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	15.33	19.4
OQU80148	Sorghum	mitochondrion	25.73	19.39
TraesCS6D01G047700.1	Wheat	mitochondrion	24.27	19.25
TraesCS1B01G072700.1	Wheat	cytosol	17.88	19.22
HORVU6Hr1G014310.1	Barley	mitochondrion	24.09	19.21
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	25.0	19.16
TraesCS1D01G068600.1	Wheat	plastid	11.86	19.12
TraesCS7D01G231400.1	Wheat	cytosol, plastid	14.05	19.11
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	11.31	19.08
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	24.82	19.05
OQU82856	Sorghum	cytosol	26.09	19.02
TraesCS1B01G072300.1	Wheat	plastid	19.53	18.84
TraesCS6A01G014600.1	Wheat	cytosol	13.5	18.73
EES09203	Sorghum	cytosol	27.19	18.67
TraesCS1D01G058400.1	Wheat	cytosol	17.52	18.64
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	24.27	18.6
TraesCS2A01G530600.1	Wheat	cytosol	25.91	18.56
TraesCS2A01G531000.1	Wheat	golgi	22.99	18.56
TraesCS6D01G076500.1	Wheat	plastid	15.33	18.54
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	12.77	18.47
TraesCS6B01G021600.1	Wheat	mitochondrion	24.09	18.44
TraesCS1A01G031600.1	Wheat	cytosol	22.26	18.43
TraesCS2B01G560700.1	Wheat	plastid	25.91	18.42
Os10t0497300-01	Rice	mitochondrion	26.64	18.39
HORVU0Hr1G035310.1	Barley	cytosol	19.53	18.38
TraesCS2A01G526200.1	Wheat	golgi	22.81	18.36
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	16.06	18.33
TraesCS2D01G532400.1	Wheat	cytosol	20.44	18.33
TraesCS2A01G531100.1	Wheat	cytosol	18.98	18.28
Zm00001d007534_P001	Maize	plastid	25.91	18.28
TraesCS1B01G072400.1	Wheat	cytosol	23.18	18.27
TraesCS1B01G038400.1	Wheat	cytosol	20.26	18.26
TraesCS2D01G532500.1	Wheat	plastid	22.63	18.24
TraesCSU01G089800.1	Wheat	mitochondrion	11.68	18.23
OQU82823	Sorghum	cytosol	26.46	18.19
OQU82827	Sorghum	cytosol	26.46	18.19
TraesCS1B01G092600.1	Wheat	plastid	17.15	18.18
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	23.18	18.17
EES07882	Sorghum	cytosol	25.73	18.15
Zm00001d009733_P001	Maize	cytosol	26.28	18.11
TraesCS1A01G031700.1	Wheat	plastid	24.45	18.08
TraesCS6D01G017800.1	Wheat	cytosol	17.7	18.06
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	25.91	18.04
TraesCS2D01G532300.1	Wheat	plastid	25.55	17.99
KXG35774	Sorghum	cytosol, mitochondrion	15.51	17.97
TraesCS1B01G039700.1	Wheat	cytosol	19.89	17.93
TraesCS2D01G532600.1	Wheat	plastid	25.36	17.91
TraesCS6D01G290900.1	Wheat	mitochondrion	23.91	17.87
TraesCS2D01G532100.1	Wheat	mitochondrion	22.45	17.77
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	21.53	17.77
KXG19780	Sorghum	cytosol	19.16	17.77
TraesCS2B01G560300.1	Wheat	cytosol	18.43	17.75
TraesCS1A01G073800.1	Wheat	mitochondrion	10.77	17.72
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	22.99	17.62
OQU82831	Sorghum	cytosol	19.71	17.62
Zm00001d007548_P001	Maize	plastid	26.09	17.57
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	25.36	17.55
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	20.44	17.53
KXG28799	Sorghum	plastid	24.27	17.5
Zm00001d007531_P001	Maize	plastid	25.91	17.44
Zm00001d007555_P001	Maize	plastid	25.91	17.44
Zm00001d007559_P001	Maize	plastid	25.91	17.38
TraesCS2B01G559900.1	Wheat	cytosol	17.15	17.34
TraesCS1D01G056600.1	Wheat	mitochondrion	6.39	17.33
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	20.8	17.3
HORVU1Hr1G004750.6	Barley	plastid	25.0	17.17
TraesCS1B01G315500.1	Wheat	mitochondrion	10.04	17.13
TraesCS1B01G085900.1	Wheat	mitochondrion	25.36	17.08
HORVU1Hr1G010970.1	Barley	mitochondrion	25.73	17.07
TraesCS1D01G068500.1	Wheat	mitochondrion	25.18	17.0
TraesCS1B01G038500.1	Wheat	mitochondrion	24.45	16.96
TraesCS1B01G039100.1	Wheat	mitochondrion	24.09	16.86
TraesCS1D01G069100.1	Wheat	mitochondrion	19.71	16.8
Os04t0349600-01	Rice	plastid	11.86	16.8
TraesCS1B01G086000.1	Wheat	plastid	20.99	16.76
TraesCS1B01G075300.1	Wheat	cytosol	18.25	16.75
TraesCS1D01G068900.1	Wheat	mitochondrion	24.82	16.73
TraesCS1B01G072900.2	Wheat	mitochondrion	26.64	16.72
TraesCS1B01G085400.1	Wheat	cytosol	19.53	16.69
TraesCS1B01G073100.1	Wheat	cytosol	18.43	16.67
HORVU1Hr1G011150.1	Barley	cytosol, plastid	26.82	16.65
TraesCS1A01G054700.2	Wheat	mitochondrion	24.64	16.63
TraesCS1A01G067400.1	Wheat	mitochondrion	25.0	16.61
TraesCS1A01G067600.1	Wheat	mitochondrion	24.64	16.61
TraesCS1D01G068800.1	Wheat	plastid	24.64	16.54
Os08t0110200-01	Rice	mitochondrion	24.09	16.54
Os10t0497432-01	Rice	mitochondrion	8.03	16.54
TraesCS1D01G055300.1	Wheat	cytosol	18.61	16.5
TraesCS1A01G054800.1	Wheat	cytosol	17.52	16.49
TraesCS1D01G056200.1	Wheat	mitochondrion	24.82	16.48
TraesCS1B01G039200.1	Wheat	mitochondrion	23.54	16.45
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	23.36	16.41
HORVU0Hr1G031920.1	Barley	plastid	25.73	16.4
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	10.22	16.37
OQU82836	Sorghum	cytosol	18.25	16.34
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	22.81	16.32
TraesCS1D01G056700.1	Wheat	cytosol	18.07	16.31
TraesCS1A01G054500.1	Wheat	mitochondrion	23.18	16.28
TraesCS1D01G068400.1	Wheat	mitochondrion	24.45	16.28
HORVU6Hr1G002890.6	Barley	cytosol, plastid	23.54	16.23
TraesCS1B01G073200.1	Wheat	cytosol	8.94	16.17
TraesCS1B01G085300.1	Wheat	mitochondrion	23.36	16.16
HORVU1Hr1G014040.1	Barley	mitochondrion	24.45	16.09
HORVU1Hr1G010890.5	Barley	cytosol	26.28	16.04
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	24.27	16.02
TraesCS1D01G057800.1	Wheat	mitochondrion	10.58	15.98
TraesCS1D01G076500.1	Wheat	mitochondrion	19.34	15.96
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	20.26	15.93
HORVU1Hr1G011160.2	Barley	cytosol, plastid	25.91	15.87
TraesCS1D01G076900.1	Wheat	plastid	18.98	15.83
TraesCS1D01G068700.1	Wheat	cytosol	12.59	15.72
TraesCS6A01G311600.1	Wheat	mitochondrion	23.91	15.67
HORVU6Hr1G076780.7	Barley	mitochondrion	23.54	15.66
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	19.16	15.6
TraesCS1A01G067000.1	Wheat	mitochondrion	20.26	15.5
HORVU1Hr1G011300.3	Barley	plastid	25.91	15.43
TraesCS1B01G071600.1	Wheat	mitochondrion	23.72	15.33
TraesCS1A01G055800.1	Wheat	mitochondrion	21.53	15.3
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	19.89	15.2
HORVU1Hr1G013810.1	Barley	plastid	23.18	15.14
TraesCS1B01G092500.1	Wheat	mitochondrion	21.53	15.07
TraesCS1A01G057300.1	Wheat	cytosol	19.71	15.04
Zm00001d009735_P001	Maize	cytosol	26.28	14.8
TraesCS1A01G055500.1	Wheat	mitochondrion	5.84	14.75
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	6.75	14.62
OQU82833	Sorghum	cytosol	11.86	14.51
TraesCS1B01G084800.1	Wheat	cytosol	12.23	14.44
HORVU1Hr1G014060.1	Barley	plastid	23.18	14.27
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	5.84	14.04
TraesCS1A01G073700.1	Wheat	cytosol	9.85	14.03
TraesCS1D01G033000.1	Wheat	cytosol	10.22	13.86
OQU82834	Sorghum	cytosol	24.27	13.81
Os04t0351333-00	Rice	cytosol	21.9	13.65
TraesCS1A01G074000.1	Wheat	mitochondrion	6.93	13.43
TraesCS1A01G056000.1	Wheat	cytosol	9.49	12.94
TraesCS1B01G038300.1	Wheat	plastid	12.77	12.82
TraesCS1D01G067600.1	Wheat	cytosol	8.39	12.6
TraesCS6B01G341800.2	Wheat	cytosol	9.12	12.53
TraesCS1B01G038600.1	Wheat	cytosol	8.21	12.4
TraesCS1D01G058500.1	Wheat	plastid	12.77	12.28
TraesCS1D01G076700.1	Wheat	cytosol	7.48	12.28
TraesCS1A01G073600.1	Wheat	mitochondrion	8.76	12.24
HORVU1Hr1G011400.44	Barley	plastid	13.32	11.85
TraesCS1A01G066600.1	Wheat	mitochondrion	5.66	11.79
TraesCS1A01G067800.1	Wheat	cytosol	7.66	11.23
TraesCS2D01G532200.1	Wheat	cytosol	5.84	10.92
TraesCS6B01G129100.1	Wheat	cytosol, plastid	5.66	10.76
TraesCS1D01G076400.1	Wheat	cytosol	6.39	9.64
OQU88581	Sorghum	cytosol	18.8	9.48
TraesCS1A01G055600.1	Wheat	cytosol	5.11	8.62
TraesCS1D01G057700.1	Wheat	cytosol	5.11	8.62

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:842565	ProteinID:AAF19552.1	ProteinID:AEE33993.1	EMBL:AK226633
ProteinID:ANM60189.1	ArrayExpress:AT1G62680	EnsemblPlantsGene:AT1G62680	RefSeq:AT1G62680	TAIR:AT1G62680	RefSeq:AT1G62680-TAIR-G
EnsemblPlants:AT1G62680.2	Unigene:At.66080	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824
GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006397	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0080156
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	RefSeq:NP_001322491.1	RefSeq:NP_176455.2	PFAM:PF12854
PFAM:PF13041	PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF1649	InterPro:Pentatricopeptide_repeat
UniProt:Q3ECK2	SUPFAM:SSF48452	TIGRFAMs:TIGR00756	TMHMM:TMhelix	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00015057B3
SEG:seg	:	:	:	:	:

Description

Pentatricopeptide repeat-containing protein At1g62680, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q3ECK2]

Coordinates

chr1:-:23207033..23209916

Molecular Weight (calculated)

61452.4 Da

IEP (calculated)

8.500

GRAVY (calculated)

0.014

Length

548 amino acids

Sequence
(BLAST)

001: MQRSIAMTAK RFLHRNLLEN GKPRTASSPS FSHCSSCRCW VRASSSVSGG DLRERLSKTR LRDIKLNDAI DLFSDMVKSR PFPSIVDFNR LLSAIVKLKK
101: YDVVISLGKK MEVLGIRNDL YTFNIVINCF CCCFQVSLAL SILGKMLKLG YEPDRVTIGS LVNGFCRRNR VSDAVSLVDK MVEIGYKPDI VAYNAIIDSL
201: CKTKRVNDAF DFFKEIERKG IRPNVVTYTA LVNGLCNSSR WSDAARLLSD MIKKKITPNV ITYSALLDAF VKNGKVLEAK ELFEEMVRMS IDPDIVTYSS
301: LINGLCLHDR IDEANQMFDL MVSKGCLADV VSYNTLINGF CKAKRVEDGM KLFREMSQRG LVSNTVTYNT LIQGFFQAGD VDKAQEFFSQ MDFFGISPDI
401: WTYNILLGGL CDNGELEKAL VIFEDMQKRE MDLDIVTYTT VIRGMCKTGK VEEAWSLFCS LSLKGLKPDI VTYTTMMSGL CTKGLLHEVE ALYTKMKQEG
501: LMKNDCTLSD GDITLSAELI KKMLSCGYAP SLLKDIKSGV CKKALSLL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.