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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 2
  • nucleus 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G62590.1 Thale cress mitochondrion 97.85 86.28
AT1G63400.1 Thale cress cytosol, plastid 77.28 74.87
CDY34688 Canola cytosol 47.59 73.48
AT1G63150.1 Thale cress mitochondrion 81.75 72.66
AT1G63080.3 Thale cress mitochondrion 79.79 72.64
AT1G63130.1 Thale cress mitochondrion 81.75 72.54
AT1G62910.1 Thale cress mitochondrion 81.57 72.15
AT1G62930.1 Thale cress plastid 80.86 71.86
AT1G63070.1 Thale cress mitochondrion 75.31 71.36
AT1G62670.1 Thale cress mitochondrion 80.14 71.11
AT1G62914.1 Thale cress mitochondrion 64.94 68.75
CDY34375 Canola mitochondrion 60.82 65.76
Bra027658.1-P Field mustard cytosol, mitochondrion 61.9 63.72
CDY25522 Canola mitochondrion, plastid 45.44 56.82
AT1G62680.2 Thale cress plastid 52.24 53.28
AT1G62720.1 Thale cress mitochondrion 45.98 52.99
AT5G16640.1 Thale cress mitochondrion 46.15 51.19
AT1G12300.1 Thale cress mitochondrion 57.96 50.86
AT3G22470.1 Thale cress cytosol, mitochondrion 56.17 50.73
AT1G64580.1 Thale cress mitochondrion 47.23 50.48
AT1G12620.1 Thale cress cytosol, mitochondrion 55.46 49.92
AT3G16710.1 Thale cress mitochondrion 44.9 49.51
AT5G41170.1 Thale cress mitochondrion 46.33 49.15
AT1G12775.1 Thale cress cytosol, mitochondrion 55.28 47.98
AT1G12700.2 Thale cress cytosol 52.95 47.9
AT1G06580.1 Thale cress mitochondrion 40.97 45.8
VIT_12s0028g02320.t01 Wine grape mitochondrion 37.92 44.44
AT1G64583.1 Thale cress mitochondrion 40.61 44.34
AT4G26800.2 Thale cress mitochondrion, plastid 39.53 43.0
VIT_14s0081g00110.t01 Wine grape cytosol 34.88 39.71
VIT_14s0081g00270.t01 Wine grape plastid 40.61 39.14
PGSC0003DMT400052977 Potato cytosol 26.48 38.05
VIT_14s0081g00120.t01 Wine grape plastid 39.36 37.74
Solyc06g005220.2.1 Tomato cytosol 26.83 36.95
Solyc06g007280.2.1 Tomato cytosol 16.82 36.86
KRH70370 Soybean cytosol 35.6 36.58
PGSC0003DMT400008757 Potato cytosol 32.56 36.55
KRH49698 Soybean cytosol 36.49 35.79
VIT_14s0081g00280.t01 Wine grape mitochondrion 40.61 35.52
PGSC0003DMT400025087 Potato endoplasmic reticulum 31.31 35.35
PGSC0003DMT400025074 Potato cytosol 34.88 35.33
KRH42744 Soybean mitochondrion 38.46 35.19
AT1G64100.2 Thale cress cytosol 50.45 34.99
Solyc06g007300.1.1 Tomato extracellular 36.85 34.8
PGSC0003DMT400008759 Potato cytosol 19.86 34.8
KRH58843 Soybean nucleus 37.92 34.7
VIT_14s0030g02280.t01 Wine grape plastid 34.7 34.58
PGSC0003DMT400025067 Potato cytosol 29.34 34.45
Solyc06g007810.1.1 Tomato cytosol 16.46 34.33
KRH38755 Soybean mitochondrion 36.31 34.18
KRH09256 Soybean mitochondrion 33.81 33.81
KRH75045 Soybean mitochondrion 35.6 33.33
KRH75048 Soybean mitochondrion 36.14 33.22
PGSC0003DMT400052971 Potato mitochondrion 35.24 33.22
KRH75063 Soybean mitochondrion, plastid 35.78 33.11
Solyc06g007740.1.1 Tomato cytosol 34.53 32.71
PGSC0003DMT400008760 Potato mitochondrion 34.17 32.59
VIT_14s0030g02260.t01 Wine grape cytosol 24.87 31.38
PGSC0003DMT400056665 Potato mitochondrion 32.74 31.07
PGSC0003DMT400053185 Potato mitochondrion 32.74 31.02
PGSC0003DMT400056663 Potato plastid 32.56 30.95
Zm00001d018982_P001 Maize mitochondrion 19.32 30.86
PGSC0003DMT400053556 Potato mitochondrion 24.87 30.28
HORVU1Hr1G018190.2 Barley cytosol 15.38 30.18
PGSC0003DMT400015293 Potato mitochondrion 32.92 30.16
PGSC0003DMT400015298 Potato mitochondrion 32.92 30.16
Os10t0495100-01 Rice cytosol, mitochondrion 24.33 29.5
Solyc04g080120.1.1 Tomato extracellular 32.02 29.25
PGSC0003DMT400053182 Potato cytosol 30.77 28.71
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.03 28.28
TraesCS6D01G083300.1 Wheat mitochondrion 22.36 28.03
Os08t0248400-01 Rice mitochondrion 22.0 27.95
Os10t0501700-00 Rice cytosol 22.54 27.75
TraesCS1A01G067700.1 Wheat extracellular 16.64 27.6
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 18.6 27.51
TraesCS2B01G126900.1 Wheat cytosol 18.78 27.49
TraesCS6A01G015000.1 Wheat mitochondrion 20.21 27.23
HORVU1Hr1G011250.1 Barley cytosol 14.31 27.12
TraesCS6B01G127200.1 Wheat cytosol 16.64 27.03
Os08t0107700-01 Rice cytosol, mitochondrion 18.07 27.01
HORVU6Hr1G017870.2 Barley mitochondrion 14.49 27.0
OQU82832 Sorghum cytosol 13.77 26.92
Os10t0499500-01 Rice mitochondrion 24.33 26.88
TraesCS1D01G058000.1 Wheat cytosol 19.5 26.85
TraesCSU01G089700.1 Wheat mitochondrion 23.08 26.76
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 22.9 26.45
Os10t0497366-00 Rice mitochondrion 18.78 26.18
OQU88594 Sorghum cytosol 24.33 26.05
TraesCSU01G090200.1 Wheat cytosol 20.57 26.02
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 15.03 25.85
EER95949 Sorghum mitochondrion 30.41 25.64
Os08t0107800-01 Rice mitochondrion 28.62 25.64
TraesCS6D01G083400.1 Wheat mitochondrion 22.36 25.36
TraesCS6B01G127500.1 Wheat cytosol 22.18 25.31
Os10t0497432-01 Rice mitochondrion 11.99 25.19
TraesCSU01G089800.1 Wheat mitochondrion 15.74 25.07
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 22.9 25.05
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 11.27 24.9
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 22.36 24.85
KXG34536 Sorghum mitochondrion 25.22 24.65
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 22.18 24.55
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 20.93 24.32
TraesCS6D01G083100.1 Wheat cytosol 21.29 24.29
OQU82836 Sorghum cytosol 26.48 24.18
TraesCS1B01G073200.1 Wheat cytosol 12.88 23.76
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 16.1 23.75
Os10t0495200-01 Rice mitochondrion 33.09 23.66
TraesCS6D01G017800.1 Wheat cytosol 22.54 23.46
TraesCS6D01G076500.1 Wheat plastid 18.96 23.4
TraesCS1B01G072700.1 Wheat cytosol 21.29 23.33
TraesCS7D01G231400.1 Wheat cytosol, plastid 16.82 23.33
TraesCS6B01G021600.1 Wheat mitochondrion 29.7 23.18
KXG27690 Sorghum cytosol, plastid 30.05 22.98
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 29.34 22.97
TraesCS1B01G072300.1 Wheat plastid 23.08 22.71
Os10t0497300-01 Rice mitochondrion 32.2 22.67
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 28.98 22.66
OQU80148 Sorghum mitochondrion 29.34 22.56
HORVU6Hr1G014310.1 Barley mitochondrion 27.55 22.42
TraesCS1B01G038200.1 Wheat mitochondrion 25.22 22.27
EES07882 Sorghum cytosol 30.95 22.27
TraesCS1A01G073800.1 Wheat mitochondrion 13.24 22.22
EES09203 Sorghum cytosol 31.66 22.18
TraesCS6D01G047700.1 Wheat mitochondrion 27.37 22.14
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 17.35 22.1
TraesCS1D01G068600.1 Wheat plastid 13.42 22.06
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 28.09 21.96
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 28.09 21.96
OQU82823 Sorghum cytosol 31.31 21.96
OQU82827 Sorghum cytosol 31.31 21.96
OQU82856 Sorghum cytosol 29.52 21.94
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 13.42 21.93
TraesCS7B01G469500.1 Wheat cytosol 22.0 21.89
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 18.78 21.88
TraesCS1B01G072400.1 Wheat cytosol 27.19 21.87
TraesCS1A01G054500.1 Wheat mitochondrion 30.41 21.79
KXG28799 Sorghum plastid 29.52 21.71
TraesCS6A01G083000.1 Wheat cytosol 17.53 21.49
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 25.4 21.39
OQU82831 Sorghum cytosol 23.43 21.37
TraesCS1D01G058400.1 Wheat cytosol 19.68 21.36
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 24.33 21.28
TraesCS1B01G092600.1 Wheat plastid 19.68 21.28
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 16.46 21.25
TraesCS1D01G055300.1 Wheat cytosol 23.43 21.2
TraesCS1B01G086000.1 Wheat plastid 25.76 20.99
TraesCS6D01G017700.1 Wheat plastid 20.04 20.97
Zm00001d007548_P001 Maize plastid 30.41 20.88
TraesCS6D01G290900.1 Wheat mitochondrion 27.37 20.87
Zm00001d007559_P001 Maize plastid 30.41 20.81
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 25.94 20.74
KXG35774 Sorghum cytosol, mitochondrion 17.53 20.72
TraesCS1A01G031600.1 Wheat cytosol 24.51 20.69
TraesCS1A01G054700.2 Wheat mitochondrion 30.05 20.69
Zm00001d009733_P001 Maize cytosol 29.34 20.63
TraesCS1B01G085300.1 Wheat mitochondrion 29.16 20.58
TraesCS6B01G114300.1 Wheat cytosol 14.31 20.57
HORVU0Hr1G035310.1 Barley cytosol 21.29 20.45
TraesCS1D01G057800.1 Wheat mitochondrion 13.24 20.39
TraesCS1A01G031700.1 Wheat plastid 27.01 20.38
HORVU6Hr1G002890.6 Barley cytosol, plastid 28.98 20.38
TraesCS2A01G531000.1 Wheat golgi 24.69 20.32
Zm00001d007555_P001 Maize plastid 29.52 20.27
TraesCS1B01G039700.1 Wheat cytosol 22.0 20.23
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 24.33 20.21
TraesCS1A01G067600.1 Wheat mitochondrion 29.34 20.17
TraesCS1B01G085900.1 Wheat mitochondrion 29.34 20.15
Zm00001d007531_P001 Maize plastid 29.34 20.15
TraesCS2A01G526200.1 Wheat golgi 24.51 20.12
TraesCS1A01G054800.1 Wheat cytosol 20.93 20.1
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 25.04 20.09
TraesCS1A01G067000.1 Wheat mitochondrion 25.58 19.97
TraesCS2D01G532400.1 Wheat cytosol 21.82 19.97
TraesCS1B01G073100.1 Wheat cytosol 21.65 19.97
TraesCS1B01G315500.1 Wheat mitochondrion 11.45 19.94
TraesCS1D01G056700.1 Wheat cytosol 21.65 19.93
TraesCS1D01G068900.1 Wheat mitochondrion 28.98 19.93
Os08t0110200-01 Rice mitochondrion 28.44 19.92
TraesCS1B01G038400.1 Wheat cytosol 21.65 19.9
TraesCS1D01G076500.1 Wheat mitochondrion 23.61 19.88
TraesCS2D01G532500.1 Wheat plastid 24.15 19.85
Zm00001d007534_P001 Maize plastid 27.55 19.82
HORVU6Hr1G076780.7 Barley mitochondrion 29.16 19.78
TraesCS1B01G038500.1 Wheat mitochondrion 27.91 19.75
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 27.55 19.74
TraesCS1D01G068500.1 Wheat mitochondrion 28.62 19.7
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 27.91 19.7
TraesCS1B01G085400.1 Wheat cytosol 22.54 19.66
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 29.16 19.64
TraesCS1A01G067400.1 Wheat mitochondrion 28.98 19.64
KXG19780 Sorghum cytosol 20.75 19.63
HORVU1Hr1G010970.1 Barley mitochondrion 28.98 19.61
TraesCS1D01G069100.1 Wheat mitochondrion 22.54 19.6
TraesCS2D01G533000.1 Wheat cytosol, extracellular 23.08 19.58
TraesCS1A01G057300.1 Wheat cytosol 25.04 19.5
TraesCS1D01G068800.1 Wheat plastid 28.44 19.49
TraesCS1A01G055800.1 Wheat mitochondrion 26.83 19.46
TraesCS1D01G068400.1 Wheat mitochondrion 28.62 19.44
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 27.37 19.44
TraesCS1A01G066600.1 Wheat mitochondrion 9.12 19.39
TraesCS1D01G056200.1 Wheat mitochondrion 28.44 19.27
TraesCS1B01G075300.1 Wheat cytosol 20.57 19.26
TraesCS2A01G530600.1 Wheat cytosol 26.3 19.22
HORVU1Hr1G014040.1 Barley mitochondrion 28.62 19.21
TraesCS1A01G074000.1 Wheat mitochondrion 9.66 19.08
HORVU1Hr1G004750.6 Barley plastid 27.19 19.05
TraesCS6A01G014600.1 Wheat cytosol 13.42 18.99
HORVU1Hr1G011150.1 Barley cytosol, plastid 29.87 18.91
TraesCS1B01G072900.2 Wheat mitochondrion 29.52 18.9
TraesCS6A01G311600.1 Wheat mitochondrion 28.26 18.9
HORVU0Hr1G031920.1 Barley plastid 28.98 18.84
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 24.15 18.83
TraesCS2D01G532100.1 Wheat mitochondrion 23.26 18.79
TraesCS2D01G532600.1 Wheat plastid 25.94 18.69
TraesCS2B01G560700.1 Wheat plastid 25.76 18.68
TraesCS1A01G073600.1 Wheat mitochondrion 13.06 18.62
TraesCS1B01G039200.1 Wheat mitochondrion 26.12 18.62
Os04t0349600-01 Rice plastid 12.88 18.6
TraesCS1B01G039100.1 Wheat mitochondrion 25.94 18.52
TraesCS1B01G071600.1 Wheat mitochondrion 27.73 18.28
TraesCS1B01G092500.1 Wheat mitochondrion 25.58 18.26
HORVU1Hr1G010890.5 Barley cytosol 29.34 18.26
HORVU1Hr1G011160.2 Barley cytosol, plastid 29.16 18.21
TraesCS2D01G532300.1 Wheat plastid 25.22 18.12
HORVU1Hr1G013810.1 Barley plastid 27.19 18.12
TraesCS1D01G076900.1 Wheat plastid 21.29 18.11
HORVU1Hr1G014060.1 Barley plastid 28.62 17.98
TraesCS2A01G531100.1 Wheat cytosol 18.25 17.93
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 24.15 17.62
HORVU1Hr1G011300.3 Barley plastid 28.62 17.39
OQU82834 Sorghum cytosol 29.87 17.34
TraesCS1D01G056600.1 Wheat mitochondrion 6.26 17.33
TraesCS2B01G559900.1 Wheat cytosol 16.64 17.16
TraesCS2B01G560300.1 Wheat cytosol 17.35 17.05
Zm00001d009735_P001 Maize cytosol 29.16 16.75
TraesCS1D01G058500.1 Wheat plastid 16.99 16.67
TraesCS6B01G129100.1 Wheat cytosol, plastid 8.59 16.67
TraesCS1A01G055500.1 Wheat mitochondrion 6.44 16.59
TraesCS1D01G076400.1 Wheat cytosol 10.73 16.53
OQU82833 Sorghum cytosol 13.24 16.52
TraesCS1D01G068700.1 Wheat cytosol 12.52 15.95
HORVU1Hr1G011400.44 Barley plastid 17.53 15.91
TraesCS1A01G073700.1 Wheat cytosol 10.91 15.84
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 6.44 15.79
TraesCS6B01G341800.2 Wheat cytosol 11.27 15.79
TraesCS1B01G084800.1 Wheat cytosol 13.06 15.73
Os04t0351333-00 Rice cytosol 24.33 15.47
TraesCS1D01G076700.1 Wheat cytosol 9.12 15.27
TraesCS1A01G056000.1 Wheat cytosol 10.91 15.17
TraesCS1D01G033000.1 Wheat cytosol 10.91 15.1
TraesCS1A01G067800.1 Wheat cytosol 9.84 14.71
TraesCS1B01G038300.1 Wheat plastid 13.95 14.29
TraesCS1B01G038600.1 Wheat cytosol 9.12 14.05
TraesCS1D01G067600.1 Wheat cytosol 8.41 12.88
TraesCS1D01G057700.1 Wheat cytosol 7.33 12.62
OQU88581 Sorghum cytosol 23.43 12.05
TraesCS1A01G055600.1 Wheat cytosol 6.8 11.69
TraesCS2D01G532200.1 Wheat cytosol 4.65 8.87
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1EntrezGene:842639ProteinID:AAG52154.1ProteinID:AEE34087.1ProteinID:ANM59741.1
ProteinID:ANM59742.1ArrayExpress:AT1G63330EnsemblPlantsGene:AT1G63330RefSeq:AT1G63330TAIR:AT1G63330RefSeq:AT1G63330-TAIR-G
EnsemblPlants:AT1G63330.2Unigene:At.52340GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003824
GO:GO:0004518GO:GO:0004519GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0006139GO:GO:0006397GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0080156GO:GO:0090305InterPro:IPR002885
InterPro:IPR011990RefSeq:NP_001322078.1RefSeq:NP_001322079.1RefSeq:NP_176522.2PFAM:PF12854PFAM:PF13041
PFscan:PS51375PANTHER:PTHR24015PANTHER:PTHR24015:SF1649InterPro:Pentatricopeptide_repeatUniProt:Q9C8T7TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sfUniParc:UPI00017616BBSEG:seg:::
Description
Pentatricopeptide repeat-containing protein At1g63330 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8T7]
Coordinates
chr1:+:23489840..23491981
Molecular Weight (calculated)
62853.9 Da
IEP (calculated)
7.198
GRAVY (calculated)
-0.032
Length
559 amino acids
Sequence
(BLAST)
001: MVKSRPLPSI FEFNKLLSAI AKMKKFDLVI SLGEKMQRLG ISHNLYTYNI LINCFCRRSQ ISLALALLGK MMKLGYEPSI VTLSSLLNGY CHGKRISDAV
101: ALVDQMVEMG YRPDTITFTT LIHGLFLHNK ASEAVALVDR MVQRGCQPNL VTYGVVVNGL CKRGDIDLAF NLLNKMEAAK IEADVVIFNT IIDSLCKYRH
201: VDDALNLFKE METKGIRPNV VTYSSLISCL CSYGRWSDAS QLLSDMIEKK INPNLVTFNA LIDAFVKEGK FVEAEKLHDD MIKRSIDPDI FTYNSLINGF
301: CMHDRLDKAK QMFEFMVSKD CFPDLDTYNT LIKGFCKSKR VEDGTELFRE MSHRGLVGDT VTYTTLIQGL FHDGDCDNAQ KVFKQMVSDG VPPDIMTYSI
401: LLDGLCNNGK LEKALEVFDY MQKSEIKLDI YIYTTMIEGM CKAGKVDDGW DLFCSLSLKG VKPNVVTYNT MISGLCSKRL LQEAYALLKK MKEDGPLPDS
501: GTYNTLIRAH LRDGDKAASA ELIREMRSCR FVGDASTIGL VANMLHDGRL DKSFLDMLS
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.