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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 4
  • mitochondrion 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 extracellular: 29876421
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc07g065490.2.1
Solyc10g006000.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 Solyc07g065490.2.1 AT4G26630.1 25387881
AT1G62670.1 Solyc10g006000.2.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400015293 Potato mitochondrion 92.81 93.11
PGSC0003DMT400015298 Potato mitochondrion 92.81 93.11
Solyc06g007280.2.1 Tomato cytosol 24.02 57.65
Solyc06g007810.1.1 Tomato cytosol 23.53 53.73
Solyc06g005220.2.1 Tomato cytosol 34.48 51.97
Solyc06g007740.1.1 Tomato cytosol 48.86 50.68
Solyc06g007300.1.1 Tomato extracellular 48.69 50.34
VIT_12s0028g02320.t01 Wine grape mitochondrion 33.17 42.56
VIT_14s0081g00270.t01 Wine grape plastid 38.56 40.69
VIT_14s0081g00120.t01 Wine grape plastid 37.42 39.28
VIT_14s0081g00110.t01 Wine grape cytosol 30.72 38.29
Bra027029.1-P Field mustard mitochondrion 14.71 37.04
CDY46909 Canola mitochondrion 17.32 36.3
CDY16031 Canola cytosol 18.3 36.01
Bra027636.1-P Field mustard cytosol 18.79 35.49
VIT_14s0030g02280.t01 Wine grape plastid 32.52 35.47
CDY39810 Canola cytosol 22.55 35.29
KRH70370 Soybean cytosol 31.21 35.11
Bra036649.1-P Field mustard cytosol 22.39 35.04
CDY03257 Canola cytosol 22.39 35.04
CDX67634 Canola cytosol 24.18 34.99
VIT_14s0081g00280.t01 Wine grape mitochondrion 36.44 34.9
CDY16110 Canola extracellular 23.2 34.63
CDY51169 Canola cytosol 23.69 34.28
KRH49698 Soybean cytosol 31.86 34.21
CDY26588 Canola extracellular 17.97 33.95
KRH38755 Soybean mitochondrion 32.84 33.84
KRH09256 Soybean mitochondrion 30.72 33.63
KRH58843 Soybean nucleus 33.5 33.55
KRH42744 Soybean mitochondrion 33.17 33.22
AT1G62680.2 Thale cress plastid 29.58 33.03
KRH75063 Soybean mitochondrion, plastid 32.52 32.95
CDY16002 Canola cytosol 16.67 32.8
KRH75048 Soybean mitochondrion 32.52 32.73
Bra027026.1-P Field mustard mitochondrion 27.94 32.7
KRH75045 Soybean mitochondrion 31.86 32.66
CDY09968 Canola cytosol 15.69 32.65
AT3G22470.1 Thale cress cytosol, mitochondrion 33.01 32.63
CDX71969 Canola cytosol 21.08 32.58
Bra025516.1-P Field mustard cytosol, mitochondrion 25.33 32.49
CDY46394 Canola mitochondrion 25.49 32.43
CDY34969 Canola mitochondrion 26.63 32.21
Bra026958.1-P Field mustard mitochondrion 33.5 32.18
AT3G16710.1 Thale cress mitochondrion 26.63 32.15
Bra021192.1-P Field mustard plastid 26.47 32.14
AT1G63330.2 Thale cress cytosol 29.25 32.02
CDY48949 Canola mitochondrion 25.16 32.02
CDY46912 Canola mitochondrion 25.82 31.98
AT1G62720.1 Thale cress mitochondrion 25.33 31.96
CDY34688 Canola cytosol 18.79 31.77
CDY65983 Canola mitochondrion 21.9 31.75
CDY06217 Canola cytosol 15.2 31.74
Bra026882.1-P Field mustard cytosol 27.61 31.65
AT1G63150.1 Thale cress mitochondrion 32.52 31.64
Bra006187.1-P Field mustard plastid 15.03 31.62
AT5G16640.1 Thale cress mitochondrion 25.98 31.55
Bra026957.1-P Field mustard mitochondrion 31.05 31.51
Bra031731.1-P Field mustard mitochondrion 26.14 31.5
Bra026884.1-P Field mustard cytosol 23.53 31.37
CDY34870 Canola mitochondrion 14.71 31.36
AT1G63080.3 Thale cress mitochondrion 31.37 31.27
AT1G62914.1 Thale cress mitochondrion 26.96 31.25
AT1G12620.1 Thale cress cytosol, mitochondrion 31.54 31.08
AT1G12700.2 Thale cress cytosol 31.37 31.07
Bra036651.1-P Field mustard mitochondrion 27.12 31.03
AT1G63400.1 Thale cress cytosol, plastid 29.25 31.02
CDY34375 Canola mitochondrion 26.14 30.95
CDY26607 Canola cytosol 23.04 30.85
AT1G62930.1 Thale cress plastid 31.7 30.84
AT5G41170.1 Thale cress mitochondrion 26.47 30.74
AT1G64583.1 Thale cress mitochondrion 25.65 30.66
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 27.45 30.6
CDY00489 Canola mitochondrion 29.25 30.55
CDY33797 Canola mitochondrion 25.49 30.47
AT1G06580.1 Thale cress mitochondrion 24.84 30.4
AT1G62910.1 Thale cress mitochondrion 31.37 30.38
Bra026971.1-P Field mustard mitochondrion 31.21 30.37
Bra028267.1-P Field mustard mitochondrion 31.05 30.35
CDY25492 Canola mitochondrion 24.35 30.35
AT1G62670.1 Thale cress mitochondrion 31.21 30.32
Bra016762.1-P Field mustard mitochondrion 30.07 30.31
CDY68929 Canola mitochondrion 30.07 30.31
AT1G12300.1 Thale cress mitochondrion 31.54 30.3
CDY31272 Canola mitochondrion 28.1 30.28
CDY66358 Canola mitochondrion 19.28 30.26
CDY26565 Canola mitochondrion 28.1 30.23
AT1G62590.1 Thale cress mitochondrion 31.21 30.13
CDX69436 Canola plastid 24.51 30.12
CDY26593 Canola cytosol 29.9 30.05
AT1G63130.1 Thale cress mitochondrion 30.88 30.0
CDY31271 Canola mitochondrion 23.37 29.42
CDY49646 Canola mitochondrion 24.02 29.34
Bra027658.1-P Field mustard cytosol, mitochondrion 25.98 29.28
Bra026954.1-P Field mustard mitochondrion 31.05 29.23
AT1G63070.1 Thale cress mitochondrion 28.1 29.15
AT1G12775.1 Thale cress cytosol, mitochondrion 30.56 29.04
VIT_14s0030g02260.t01 Wine grape cytosol 20.91 28.89
CDY28348 Canola mitochondrion, plastid 28.1 28.76
CDY35831 Canola mitochondrion 24.18 28.74
CDY16032 Canola mitochondrion 19.12 28.68
AT4G26800.2 Thale cress mitochondrion, plastid 24.02 28.6
CDY08386 Canola cytosol 20.75 28.54
AT1G64580.1 Thale cress mitochondrion 24.35 28.49
CDY16003 Canola cytosol, plastid 17.97 28.13
CDY33753 Canola mitochondrion 20.1 27.7
CDY25519 Canola mitochondrion, plastid 28.76 27.54
CDX68680 Canola mitochondrion 20.75 27.49
CDY16033 Canola cytosol 6.7 27.33
CDY29251 Canola mitochondrion 22.55 27.22
Bra026401.1-P Field mustard plastid 23.37 26.73
CDX89301 Canola plastid 23.37 26.73
CDY25522 Canola mitochondrion, plastid 19.44 26.62
Bra026836.1-P Field mustard cytosol, mitochondrion 21.24 26.48
TraesCS2B01G126900.1 Wheat cytosol 16.5 26.44
CDY47835 Canola mitochondrion 18.79 26.32
Os10t0495100-01 Rice cytosol, mitochondrion 19.77 26.25
Bra027726.1-P Field mustard mitochondrion 19.93 25.9
Zm00001d018982_P001 Maize mitochondrion 14.71 25.71
TraesCS1A01G067700.1 Wheat extracellular 14.05 25.52
TraesCS6A01G015000.1 Wheat mitochondrion 17.16 25.3
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 12.09 24.92
HORVU1Hr1G018190.2 Barley cytosol 11.6 24.91
AT1G64100.2 Thale cress cytosol 32.68 24.81
CDY26589 Canola cytosol 2.78 24.64
TraesCS1D01G058000.1 Wheat cytosol 16.34 24.63
Os08t0248400-01 Rice mitochondrion 17.65 24.55
OQU88594 Sorghum cytosol 20.91 24.52
CDY66357 Canola cytosol 15.03 24.27
Os10t0497366-00 Rice mitochondrion 15.69 23.94
Os10t0499500-01 Rice mitochondrion 19.77 23.91
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 19.93 23.87
KXG34536 Sorghum mitochondrion 22.22 23.78
HORVU1Hr1G011250.1 Barley cytosol 11.44 23.73
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 12.58 23.69
HORVU6Hr1G017870.2 Barley mitochondrion 11.6 23.67
Os10t0501700-00 Rice cytosol 17.32 23.35
TraesCS6B01G127200.1 Wheat cytosol 13.07 23.26
TraesCS6D01G076500.1 Wheat plastid 17.16 23.18
TraesCS6D01G083300.1 Wheat mitochondrion 16.83 23.09
TraesCSU01G089800.1 Wheat mitochondrion 13.24 23.08
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 14.22 23.02
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 18.79 22.86
TraesCS6D01G083100.1 Wheat cytosol 18.3 22.86
EER95949 Sorghum mitochondrion 24.67 22.78
TraesCS1B01G072700.1 Wheat cytosol 18.95 22.75
OQU82832 Sorghum cytosol 10.62 22.73
TraesCS6D01G017800.1 Wheat cytosol 19.77 22.53
TraesCS6B01G127500.1 Wheat cytosol 17.97 22.45
TraesCSU01G089700.1 Wheat mitochondrion 17.65 22.41
TraesCS7B01G469500.1 Wheat cytosol 20.42 22.24
TraesCSU01G090200.1 Wheat cytosol 16.01 22.17
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 13.73 22.16
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 17.48 22.11
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 15.85 22.1
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 18.14 21.98
HORVU6Hr1G014310.1 Barley mitochondrion 24.51 21.83
TraesCS6D01G083400.1 Wheat mitochondrion 17.48 21.7
TraesCS1B01G038200.1 Wheat mitochondrion 22.39 21.64
TraesCS7D01G231400.1 Wheat cytosol, plastid 14.22 21.59
TraesCS6B01G021600.1 Wheat mitochondrion 25.16 21.51
Os08t0107800-01 Rice mitochondrion 21.9 21.47
TraesCS1D01G056700.1 Wheat cytosol 21.24 21.42
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 16.83 21.41
TraesCS1D01G058400.1 Wheat cytosol 17.97 21.36
CDY34370 Canola cytosol 28.59 21.32
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 24.84 21.26
TraesCS1D01G068600.1 Wheat plastid 11.76 21.18
KXG35774 Sorghum cytosol, mitochondrion 16.34 21.14
KXG27690 Sorghum cytosol, plastid 25.16 21.07
TraesCS6A01G083000.1 Wheat cytosol 15.69 21.05
TraesCS1D01G055300.1 Wheat cytosol 21.24 21.04
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 14.87 21.02
EES09203 Sorghum cytosol 27.29 20.93
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 24.35 20.87
Os08t0107700-01 Rice cytosol, mitochondrion 12.75 20.86
TraesCS1B01G038400.1 Wheat cytosol 20.59 20.72
EES07882 Sorghum cytosol 26.14 20.59
TraesCS1B01G315500.1 Wheat mitochondrion 10.78 20.56
OQU80148 Sorghum mitochondrion 24.35 20.5
TraesCS2A01G531000.1 Wheat golgi 22.71 20.47
TraesCS2D01G532500.1 Wheat plastid 22.71 20.44
TraesCS1B01G085400.1 Wheat cytosol 21.41 20.44
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 23.86 20.42
TraesCS2A01G526200.1 Wheat golgi 22.71 20.41
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 22.06 20.33
TraesCS1B01G073100.1 Wheat cytosol 20.1 20.3
TraesCS2B01G559900.1 Wheat cytosol 17.97 20.3
Zm00001d009733_P001 Maize cytosol 26.31 20.25
OQU82856 Sorghum cytosol 24.84 20.21
TraesCS1B01G073200.1 Wheat cytosol 9.97 20.13
Os10t0495200-01 Rice mitochondrion 25.65 20.08
TraesCS2B01G560300.1 Wheat cytosol 18.63 20.04
Os10t0497300-01 Rice mitochondrion 25.98 20.03
TraesCS1B01G085900.1 Wheat mitochondrion 26.63 20.02
TraesCS1A01G054800.1 Wheat cytosol 18.95 19.93
Os10t0497432-01 Rice mitochondrion 8.66 19.92
TraesCS1B01G092600.1 Wheat plastid 16.83 19.92
TraesCS6D01G290900.1 Wheat mitochondrion 23.86 19.92
OQU82831 Sorghum cytosol 19.93 19.9
TraesCS2D01G533000.1 Wheat cytosol, extracellular 21.41 19.88
OQU82823 Sorghum cytosol 25.82 19.82
TraesCS2D01G532400.1 Wheat cytosol 19.77 19.8
TraesCS6B01G114300.1 Wheat cytosol 12.58 19.79
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 8.17 19.76
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 22.55 19.74
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 23.04 19.72
TraesCS2B01G560700.1 Wheat plastid 24.84 19.71
OQU82827 Sorghum cytosol 25.65 19.7
CDX81633 Canola extracellular, golgi, plasma membrane 29.25 19.69
TraesCS1B01G086000.1 Wheat plastid 22.06 19.68
KXG19780 Sorghum cytosol 18.95 19.63
TraesCS1A01G054700.2 Wheat mitochondrion 25.98 19.58
TraesCS1B01G072400.1 Wheat cytosol 22.22 19.57
TraesCS1A01G031700.1 Wheat plastid 23.69 19.57
TraesCS1A01G073800.1 Wheat mitochondrion 10.62 19.52
TraesCS2D01G532100.1 Wheat mitochondrion 22.06 19.51
TraesCS1B01G038500.1 Wheat mitochondrion 25.16 19.49
TraesCS6D01G017700.1 Wheat plastid 16.99 19.48
TraesCS1B01G039700.1 Wheat cytosol 19.28 19.41
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 15.2 19.38
TraesCS1D01G068500.1 Wheat mitochondrion 25.65 19.34
TraesCS2D01G532600.1 Wheat plastid 24.51 19.33
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.0 19.32
TraesCS1D01G057800.1 Wheat mitochondrion 11.44 19.28
TraesCS1A01G067400.1 Wheat mitochondrion 25.98 19.27
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 24.51 19.23
TraesCS1A01G031600.1 Wheat cytosol 20.75 19.18
OQU82836 Sorghum cytosol 19.12 19.12
TraesCS6D01G047700.1 Wheat mitochondrion 21.57 19.1
HORVU0Hr1G035310.1 Barley cytosol 18.14 19.07
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 24.51 19.06
TraesCS2D01G532300.1 Wheat plastid 24.18 19.02
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 10.62 19.01
TraesCS2A01G531100.1 Wheat cytosol 17.65 18.98
TraesCS1A01G067600.1 Wheat mitochondrion 25.16 18.94
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 19.77 18.94
HORVU1Hr1G004750.6 Barley plastid 24.67 18.92
Bra027656.1-P Field mustard cytosol 29.09 18.92
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 25.65 18.92
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 20.75 18.87
HORVU1Hr1G014040.1 Barley mitochondrion 25.65 18.85
TraesCS1B01G072300.1 Wheat plastid 17.48 18.84
TraesCS1D01G068900.1 Wheat mitochondrion 25.0 18.82
KXG28799 Sorghum plastid 23.37 18.82
HORVU6Hr1G076780.7 Barley mitochondrion 25.33 18.81
TraesCS1B01G075300.1 Wheat cytosol 18.3 18.76
TraesCS1D01G068400.1 Wheat mitochondrion 25.16 18.71
TraesCS1D01G056200.1 Wheat mitochondrion 25.16 18.67
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 21.24 18.65
TraesCS1B01G085300.1 Wheat mitochondrion 24.02 18.56
TraesCS1B01G039100.1 Wheat mitochondrion 23.69 18.52
TraesCS1D01G069100.1 Wheat mitochondrion 19.44 18.51
TraesCS1A01G054500.1 Wheat mitochondrion 23.53 18.46
TraesCS1A01G067000.1 Wheat mitochondrion 21.57 18.44
TraesCS2A01G530600.1 Wheat cytosol 23.04 18.43
Zm00001d007531_P001 Maize plastid 24.51 18.43
TraesCS6A01G311600.1 Wheat mitochondrion 25.16 18.42
Zm00001d007534_P001 Maize plastid 23.37 18.4
TraesCS1D01G068800.1 Wheat plastid 24.51 18.38
HORVU6Hr1G002890.6 Barley cytosol, plastid 23.86 18.36
TraesCS1B01G071600.1 Wheat mitochondrion 25.16 18.16
Zm00001d007548_P001 Maize plastid 23.86 17.94
Zm00001d007559_P001 Maize plastid 23.86 17.87
Zm00001d007555_P001 Maize plastid 23.69 17.81
TraesCS6A01G014600.1 Wheat cytosol 11.44 17.72
TraesCS1B01G084800.1 Wheat cytosol 13.4 17.67
TraesCS1A01G055800.1 Wheat mitochondrion 22.22 17.64
TraesCS1D01G076500.1 Wheat mitochondrion 19.12 17.62
TraesCS1B01G092500.1 Wheat mitochondrion 22.39 17.5
TraesCS1B01G039200.1 Wheat mitochondrion 22.39 17.47
HORVU1Hr1G010970.1 Barley mitochondrion 23.53 17.43
TraesCS1A01G057300.1 Wheat cytosol 20.42 17.41
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 21.73 17.36
TraesCS1B01G072900.2 Wheat mitochondrion 24.67 17.3
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 20.1 17.15
Bra016758.1-P Field mustard plastid 32.35 17.08
HORVU1Hr1G014060.1 Barley plastid 24.84 17.08
HORVU1Hr1G013810.1 Barley plastid 23.37 17.04
Os08t0110200-01 Rice mitochondrion 22.22 17.04
HORVU1Hr1G011160.2 Barley cytosol, plastid 24.84 16.98
HORVU0Hr1G031920.1 Barley plastid 23.86 16.98
TraesCS1A01G073700.1 Wheat cytosol 10.62 16.88
HORVU1Hr1G011150.1 Barley cytosol, plastid 24.02 16.65
Zm00001d009735_P001 Maize cytosol 26.31 16.55
HORVU1Hr1G010890.5 Barley cytosol 24.18 16.48
TraesCS1A01G073600.1 Wheat mitochondrion 10.46 16.33
TraesCS1D01G068700.1 Wheat cytosol 11.6 16.17
HORVU1Hr1G011300.3 Barley plastid 24.18 16.09
CDY15970 Canola cytosol 2.45 15.96
OQU82833 Sorghum cytosol 11.6 15.85
TraesCS1D01G076900.1 Wheat plastid 16.99 15.83
Os04t0349600-01 Rice plastid 9.97 15.76
TraesCS1A01G056000.1 Wheat cytosol 10.29 15.67
OQU82834 Sorghum cytosol 24.18 15.37
CDY31277 Canola plastid 23.86 15.22
HORVU1Hr1G011400.44 Barley plastid 15.2 15.1
TraesCS1D01G058500.1 Wheat plastid 13.89 14.91
TraesCS1D01G076400.1 Wheat cytosol 8.82 14.88
TraesCS1D01G056600.1 Wheat mitochondrion 4.9 14.85
TraesCS1A01G066600.1 Wheat mitochondrion 6.37 14.83
TraesCS6B01G341800.2 Wheat cytosol 9.64 14.79
TraesCS1D01G076700.1 Wheat cytosol 7.84 14.37
TraesCS1D01G033000.1 Wheat cytosol 9.48 14.36
TraesCS1A01G074000.1 Wheat mitochondrion 6.54 14.13
Os04t0351333-00 Rice cytosol 19.93 13.88
TraesCS1B01G038600.1 Wheat cytosol 8.17 13.77
TraesCS1D01G067600.1 Wheat cytosol 8.17 13.7
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 5.07 13.6
TraesCS1A01G055600.1 Wheat cytosol 7.19 13.54
TraesCS2D01G532200.1 Wheat cytosol 6.21 12.97
CDY34680 Canola cytosol 19.28 12.94
TraesCS1A01G055500.1 Wheat mitochondrion 4.58 12.9
TraesCS1A01G067800.1 Wheat cytosol 7.84 12.83
TraesCS1B01G038300.1 Wheat plastid 11.44 12.82
TraesCS1D01G057700.1 Wheat cytosol 6.7 12.62
TraesCS6B01G129100.1 Wheat cytosol, plastid 5.72 12.15
OQU88581 Sorghum cytosol 20.26 11.41
CDY21063 Canola plastid 1.8 2.0
Protein Annotations
Gene3D:1.25.40.10MapMan:35.1GO:GO:0003674GO:GO:0003676GO:GO:0003723GO:GO:0003824
GO:GO:0004518GO:GO:0004519GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0009451GO:GO:0009987
GO:GO:0016787GO:GO:0043231GO:GO:0090305InterPro:IPR002885InterPro:IPR011990UniProt:K4BV91
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PANTHER:PTHR44149PANTHER:PTHR44149:SF3
InterPro:Pentatricopeptide_repeatSUPFAM:SSF81901EnsemblPlantsGene:Solyc04g080120.1EnsemblPlants:Solyc04g080120.1.1TIGRFAMs:TIGR00756InterPro:TPR-like_helical_dom_sf
UniParc:UPI000276565DSEG:seg::::
Description
No Description!
Coordinates
chr4:-:64379538..64381376
Molecular Weight (calculated)
69828.9 Da
IEP (calculated)
8.265
GRAVY (calculated)
0.013
Length
612 amino acids
Sequence
(BLAST)
001: MLFHSWRKSL CNRGNFFPLI QLFPLSHSHV SIFHSCASVP SKYPSFRKKP SVSKKRKVVI FREFRDVNSL NDAVCVFHRL VRKEPVPSVV ELAKLLRVMI
101: NMKEYSVVIS FFGEMRKLGI PFDEYILTIV INSFCLLGCA ENGFSILGVF FKSGVQFNVV TFSTLMRGLF EQNKIQDAMW LFRKLVKEKI CKMDEVMFGT
201: VMNGLCKQGH TQTALSLLRI MEQGDAKPNT VVYSIVVDAL CKDQMVGAAF NLFNEMKRKG ITPNVHTYSS LVDGLCKFDQ WEEVRLLLDE MTHLNIFPNV
301: HTFSMLVDAF CKKGMVEDAV EVLNVMIQKG EHPDVVTFNA IMEGYCLRGE IDVARRVLGS MTDIGVKCDI FSYNILVNGY CKQKKLDEAM HLYCEISQKG
401: LKPDIVTYST ILQGLFEVGR VECSENLFTE MQNAGHSPDI YTCGIMLHGY LKNGHVERAM SLFHRWEKQK EDAYILIYNR GNDGFFKIQK LDKARSIFDK
501: LYSVGLHPDV IRYNVTVNGL CIEGLVDEAK ELLRKMEDNR CSPHNATSNL IVNGLLKSTK TNEAMTLLKE IIQRGFPADR VTMSLLIELL LLIGEGPFLL
601: NMIPELHLRN EK
Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)
001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.