Factsheet for Bra025516.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67634	Canola	cytosol	87.42	98.58
CDY48949	Canola	mitochondrion	99.16	98.34
CDY46394	Canola	mitochondrion	98.53	97.71
AT5G41170.1	Thale cress	mitochondrion	74.63	67.55
Bra027029.1-P	Field mustard	mitochondrion	29.77	58.44
Bra036649.1-P	Field mustard	cytosol	43.61	53.2
Bra021192.1-P	Field mustard	plastid	56.18	53.17
Bra006187.1-P	Field mustard	plastid	32.29	52.92
Bra027636.1-P	Field mustard	cytosol	34.59	50.93
Bra036651.1-P	Field mustard	mitochondrion	55.14	49.16
Bra027026.1-P	Field mustard	mitochondrion	53.88	49.14
Bra027726.1-P	Field mustard	mitochondrion	41.3	41.83
Bra026882.1-P	Field mustard	cytosol	45.28	40.45
Bra026401.1-P	Field mustard	plastid	44.03	39.25
Bra027658.1-P	Field mustard	cytosol, mitochondrion	42.35	37.2
VIT_12s0028g02320.t01	Wine grape	mitochondrion	35.85	35.85
Bra026957.1-P	Field mustard	mitochondrion	45.28	35.82
Bra026884.1-P	Field mustard	cytosol	34.38	35.73
Bra028267.1-P	Field mustard	mitochondrion	46.75	35.62
Bra026958.1-P	Field mustard	mitochondrion	47.38	35.48
Bra026954.1-P	Field mustard	mitochondrion	48.01	35.23
Bra026971.1-P	Field mustard	mitochondrion	45.28	34.34
Bra016762.1-P	Field mustard	mitochondrion	43.61	34.27
Bra026836.1-P	Field mustard	cytosol, mitochondrion	35.01	34.01
Bra031731.1-P	Field mustard	mitochondrion	35.85	33.66
KRH70370	Soybean	cytosol	35.85	31.43
PGSC0003DMT400008759	Potato	cytosol	20.75	31.03
VIT_14s0081g00270.t01	Wine grape	plastid	37.32	30.69
PGSC0003DMT400052977	Potato	cytosol	24.95	30.59
KRH49698	Soybean	cytosol	36.48	30.53
VIT_14s0030g02280.t01	Wine grape	plastid	35.64	30.3
KRH09256	Soybean	mitochondrion	35.43	30.23
Solyc06g007280.2.1	Tomato	cytosol	16.14	30.2
KRH42744	Soybean	mitochondrion	38.57	30.11
KRH58843	Soybean	nucleus	38.36	29.95
VIT_14s0081g00110.t01	Wine grape	cytosol	30.82	29.94
VIT_14s0081g00120.t01	Wine grape	plastid	36.27	29.67
Solyc06g005220.2.1	Tomato	cytosol	25.16	29.56
PGSC0003DMT400008757	Potato	cytosol	30.19	28.92
KRH75045	Soybean	mitochondrion	35.85	28.64
KRH75063	Soybean	mitochondrion, plastid	36.27	28.64
KRH38755	Soybean	mitochondrion	35.64	28.62
PGSC0003DMT400008760	Potato	mitochondrion	35.01	28.5
Solyc06g007810.1.1	Tomato	cytosol	15.93	28.36
PGSC0003DMT400025087	Potato	endoplasmic reticulum	29.35	28.28
VIT_14s0081g00280.t01	Wine grape	mitochondrion	37.53	28.01
KRH75048	Soybean	mitochondrion	35.01	27.47
PGSC0003DMT400025074	Potato	cytosol	31.66	27.36
PGSC0003DMT400052971	Potato	mitochondrion	33.96	27.32
Solyc06g007300.1.1	Tomato	extracellular	33.75	27.2
PGSC0003DMT400025067	Potato	cytosol	27.04	27.1
PGSC0003DMT400053556	Potato	mitochondrion	25.79	26.8
PGSC0003DMT400056665	Potato	mitochondrion	32.91	26.66
VIT_14s0030g02260.t01	Wine grape	cytosol	24.53	26.41
Solyc06g007740.1.1	Tomato	cytosol	32.49	26.27
HORVU1Hr1G011250.1	Barley	cytosol	16.14	26.1
PGSC0003DMT400015293	Potato	mitochondrion	32.91	25.74
PGSC0003DMT400015298	Potato	mitochondrion	32.91	25.74
PGSC0003DMT400056663	Potato	plastid	31.66	25.68
PGSC0003DMT400053185	Potato	mitochondrion	31.66	25.59
Solyc04g080120.1.1	Tomato	extracellular	32.49	25.33
PGSC0003DMT400053182	Potato	cytosol	30.4	24.21
TraesCS2B01G126900.1	Wheat	cytosol	19.29	24.08
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.88	23.91
Os10t0501700-00	Rice	cytosol	22.43	23.57
Os10t0495100-01	Rice	cytosol, mitochondrion	21.8	22.56
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	17.82	22.49
KXG34536	Sorghum	mitochondrion	26.62	22.2
Os10t0497366-00	Rice	mitochondrion	18.45	21.95
OQU88594	Sorghum	cytosol	23.9	21.84
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	23.27	21.72
TraesCS6B01G127200.1	Wheat	cytosol	15.3	21.22
TraesCS6D01G083300.1	Wheat	mitochondrion	19.71	21.08
HORVU1Hr1G018190.2	Barley	cytosol	12.58	21.05
OQU82832	Sorghum	cytosol	12.58	20.98
TraesCSU01G089700.1	Wheat	mitochondrion	21.17	20.95
TraesCS1D01G058000.1	Wheat	cytosol	17.61	20.69
Os08t0248400-01	Rice	mitochondrion	19.08	20.68
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	20.96	20.66
TraesCS6D01G083400.1	Wheat	mitochondrion	21.17	20.49
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	21.59	20.48
Bra027656.1-P	Field mustard	cytosol	40.04	20.3
Zm00001d018982_P001	Maize	mitochondrion	14.88	20.29
EER95949	Sorghum	mitochondrion	28.09	20.21
Os08t0107800-01	Rice	mitochondrion	26.42	20.19
TraesCS6A01G015000.1	Wheat	mitochondrion	17.19	19.76
Bra016758.1-P	Field mustard	plastid	47.8	19.67
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	18.03	19.59
TraesCS1A01G067700.1	Wheat	extracellular	13.84	19.58
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	19.71	19.54
TraesCSU01G090200.1	Wheat	cytosol	18.03	19.46
TraesCS1D01G058400.1	Wheat	cytosol	20.96	19.42
HORVU6Hr1G017870.2	Barley	mitochondrion	12.16	19.33
TraesCS1B01G072700.1	Wheat	cytosol	20.55	19.22
TraesCS6D01G083100.1	Wheat	cytosol	19.71	19.18
TraesCS7B01G469500.1	Wheat	cytosol	22.43	19.04
TraesCS6B01G127500.1	Wheat	cytosol	19.5	18.98
TraesCS1B01G038200.1	Wheat	mitochondrion	25.16	18.96
TraesCS6D01G017700.1	Wheat	plastid	21.17	18.91
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	19.92	18.81
Os10t0499500-01	Rice	mitochondrion	19.92	18.77
TraesCS6A01G083000.1	Wheat	cytosol	17.82	18.64
TraesCS6D01G017800.1	Wheat	cytosol	20.75	18.44
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	16.35	18.01
TraesCS1D01G068600.1	Wheat	plastid	12.79	17.94
Os08t0107700-01	Rice	cytosol, mitochondrion	13.84	17.65
TraesCS1B01G072300.1	Wheat	plastid	20.96	17.61
TraesCS6B01G114300.1	Wheat	cytosol	14.26	17.48
TraesCS6D01G076500.1	Wheat	plastid	16.56	17.44
Os10t0495200-01	Rice	mitochondrion	28.51	17.39
TraesCSU01G089800.1	Wheat	mitochondrion	12.79	17.38
KXG27690	Sorghum	cytosol, plastid	26.62	17.37
TraesCS7D01G231400.1	Wheat	cytosol, plastid	14.68	17.37
HORVU0Hr1G035310.1	Barley	cytosol	21.17	17.35
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	26.0	17.34
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	26.0	17.34
KXG35774	Sorghum	cytosol, mitochondrion	17.19	17.34
TraesCS1D01G069100.1	Wheat	mitochondrion	23.27	17.26
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	11.74	17.23
TraesCS1B01G086000.1	Wheat	plastid	24.74	17.2
OQU82856	Sorghum	cytosol	27.04	17.15
OQU82831	Sorghum	cytosol	22.01	17.13
TraesCS1B01G092600.1	Wheat	plastid	18.45	17.02
HORVU6Hr1G014310.1	Barley	mitochondrion	24.32	16.89
TraesCS2A01G531100.1	Wheat	cytosol	20.13	16.87
TraesCS1A01G031700.1	Wheat	plastid	26.21	16.87
TraesCS1B01G072400.1	Wheat	cytosol	24.53	16.83
OQU80148	Sorghum	mitochondrion	25.58	16.78
TraesCS6D01G290900.1	Wheat	mitochondrion	25.79	16.78
Os10t0497300-01	Rice	mitochondrion	27.88	16.75
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	24.95	16.67
TraesCS6B01G021600.1	Wheat	mitochondrion	24.95	16.62
Zm00001d007534_P001	Maize	plastid	27.04	16.6
OQU82823	Sorghum	cytosol	27.67	16.56
OQU82827	Sorghum	cytosol	27.67	16.56
EES09203	Sorghum	cytosol	27.67	16.54
TraesCS2D01G532400.1	Wheat	cytosol	21.17	16.53
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	24.74	16.5
TraesCS6D01G047700.1	Wheat	mitochondrion	23.9	16.5
EES07882	Sorghum	cytosol	26.83	16.47
TraesCS2D01G532500.1	Wheat	plastid	23.48	16.47
TraesCS1A01G031600.1	Wheat	cytosol	22.85	16.47
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	22.64	16.39
TraesCS2A01G530600.1	Wheat	cytosol	26.21	16.34
KXG28799	Sorghum	plastid	26.0	16.32
TraesCS1B01G038400.1	Wheat	cytosol	20.75	16.28
TraesCS2D01G532600.1	Wheat	plastid	26.42	16.24
Zm00001d009733_P001	Maize	cytosol	27.04	16.23
Zm00001d007555_P001	Maize	plastid	27.67	16.22
TraesCS2A01G531000.1	Wheat	golgi	23.06	16.2
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	23.69	16.17
TraesCS1A01G067600.1	Wheat	mitochondrion	27.46	16.11
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	12.79	16.09
Zm00001d007559_P001	Maize	plastid	27.46	16.03
TraesCS1B01G073100.1	Wheat	cytosol	20.34	16.01
Zm00001d007548_P001	Maize	plastid	27.25	15.97
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.38	15.96
TraesCS1B01G075300.1	Wheat	cytosol	19.92	15.91
TraesCS2B01G559900.1	Wheat	cytosol	18.03	15.87
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	15.93	15.83
TraesCS2B01G560300.1	Wheat	cytosol	18.87	15.82
TraesCS1D01G056700.1	Wheat	cytosol	20.13	15.82
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	26.21	15.78
KXG19780	Sorghum	cytosol	19.5	15.74
TraesCS2A01G526200.1	Wheat	golgi	22.43	15.71
TraesCS6A01G014600.1	Wheat	cytosol	13.0	15.7
TraesCS1D01G055300.1	Wheat	cytosol	20.34	15.7
TraesCS2B01G560700.1	Wheat	plastid	25.37	15.69
Os08t0110200-01	Rice	mitochondrion	26.21	15.66
TraesCS1B01G039700.1	Wheat	cytosol	19.92	15.62
HORVU6Hr1G002890.6	Barley	cytosol, plastid	26.0	15.6
TraesCS1B01G315500.1	Wheat	mitochondrion	10.48	15.58
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	21.59	15.51
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	25.58	15.5
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	11.11	15.5
Zm00001d007531_P001	Maize	plastid	26.42	15.48
TraesCS2D01G532100.1	Wheat	mitochondrion	22.43	15.46
TraesCS1B01G039100.1	Wheat	mitochondrion	25.37	15.45
TraesCS1B01G038500.1	Wheat	mitochondrion	25.58	15.44
TraesCS1A01G054500.1	Wheat	mitochondrion	25.16	15.38
TraesCS1B01G085900.1	Wheat	mitochondrion	26.21	15.36
TraesCS1A01G057300.1	Wheat	cytosol	23.06	15.32
TraesCS1D01G068800.1	Wheat	plastid	26.21	15.32
TraesCS2D01G532300.1	Wheat	plastid	24.95	15.3
HORVU1Hr1G004750.6	Barley	plastid	25.58	15.29
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	24.95	15.26
TraesCS1B01G073200.1	Wheat	cytosol	9.64	15.18
TraesCS1A01G067400.1	Wheat	mitochondrion	26.21	15.15
TraesCS1A01G054700.2	Wheat	mitochondrion	25.79	15.15
TraesCS1D01G068500.1	Wheat	mitochondrion	25.79	15.15
HORVU1Hr1G010970.1	Barley	mitochondrion	26.21	15.13
TraesCS1B01G085400.1	Wheat	cytosol	20.34	15.13
TraesCS1B01G039200.1	Wheat	mitochondrion	24.74	15.05
HORVU1Hr1G014040.1	Barley	mitochondrion	26.21	15.01
TraesCS1D01G056200.1	Wheat	mitochondrion	25.79	14.91
HORVU0Hr1G031920.1	Barley	plastid	26.62	14.77
TraesCS1D01G076900.1	Wheat	plastid	20.34	14.76
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	21.38	14.63
TraesCS1B01G071600.1	Wheat	mitochondrion	26.0	14.62
TraesCS1A01G054800.1	Wheat	cytosol	17.82	14.6
TraesCS6A01G311600.1	Wheat	mitochondrion	25.58	14.59
TraesCS1D01G068700.1	Wheat	cytosol	13.42	14.58
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	25.37	14.58
TraesCS1D01G068900.1	Wheat	mitochondrion	24.74	14.51
TraesCS1D01G068400.1	Wheat	mitochondrion	24.95	14.46
HORVU6Hr1G076780.7	Barley	mitochondrion	24.95	14.44
TraesCS1B01G072900.2	Wheat	mitochondrion	26.42	14.43
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	20.34	14.41
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	23.06	14.36
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	7.55	14.23
HORVU1Hr1G011150.1	Barley	cytosol, plastid	26.21	14.16
HORVU1Hr1G010890.5	Barley	cytosol	26.42	14.03
HORVU1Hr1G011160.2	Barley	cytosol, plastid	26.21	13.97
TraesCS1B01G085300.1	Wheat	mitochondrion	23.06	13.89
TraesCS1D01G056600.1	Wheat	mitochondrion	5.87	13.86
OQU82833	Sorghum	cytosol	13.0	13.84
TraesCS1A01G073800.1	Wheat	mitochondrion	9.64	13.81
TraesCS1D01G057800.1	Wheat	mitochondrion	10.48	13.77
TraesCS1A01G055800.1	Wheat	mitochondrion	22.22	13.75
HORVU1Hr1G013810.1	Barley	plastid	24.11	13.71
HORVU1Hr1G011300.3	Barley	plastid	26.42	13.7
TraesCS1A01G067000.1	Wheat	mitochondrion	20.55	13.69
TraesCS1B01G092500.1	Wheat	mitochondrion	22.43	13.67
TraesCS1B01G084800.1	Wheat	cytosol	13.21	13.58
OQU82836	Sorghum	cytosol	17.19	13.4
TraesCS1D01G076500.1	Wheat	mitochondrion	18.45	13.25
Os04t0349600-01	Rice	plastid	10.69	13.18
TraesCS1D01G076700.1	Wheat	cytosol	9.22	13.17
HORVU1Hr1G014060.1	Barley	plastid	24.53	13.15
Zm00001d009735_P001	Maize	cytosol	26.62	13.05
TraesCS1A01G073700.1	Wheat	cytosol	10.06	12.47
TraesCS1A01G056000.1	Wheat	cytosol	10.48	12.44
Os10t0497432-01	Rice	mitochondrion	6.92	12.41
OQU82834	Sorghum	cytosol	24.74	12.25
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	18.24	12.13
TraesCS1A01G055500.1	Wheat	mitochondrion	5.45	11.98
TraesCS1D01G033000.1	Wheat	cytosol	9.64	11.39
TraesCS6B01G341800.2	Wheat	cytosol	9.43	11.28
Os04t0351333-00	Rice	cytosol	20.55	11.15
TraesCS1D01G058500.1	Wheat	plastid	13.21	11.05
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	5.24	10.96
TraesCS1A01G067800.1	Wheat	cytosol	8.6	10.96
TraesCS1A01G074000.1	Wheat	mitochondrion	6.5	10.95
TraesCS1D01G067600.1	Wheat	cytosol	7.97	10.41
TraesCS1B01G038300.1	Wheat	plastid	11.74	10.26
TraesCS1A01G073600.1	Wheat	mitochondrion	8.18	9.95
TraesCS1A01G066600.1	Wheat	mitochondrion	5.45	9.89
TraesCS1B01G038600.1	Wheat	cytosol	7.34	9.64
HORVU1Hr1G011400.44	Barley	plastid	12.16	9.42
OQU88581	Sorghum	cytosol	21.38	9.38
TraesCS6B01G129100.1	Wheat	cytosol, plastid	5.66	9.38
TraesCS1D01G076400.1	Wheat	cytosol	6.08	7.99
TraesCS1D01G057700.1	Wheat	cytosol	5.03	7.38
TraesCS1A01G055600.1	Wheat	cytosol	4.82	7.08
TraesCS2D01G532200.1	Wheat	cytosol	3.56	5.8

Protein Annotations

EnsemblPlants:Bra025516.1	EnsemblPlants:Bra025516.1-P	EnsemblPlantsGene:Bra025516	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015
PANTHER:PTHR24015:SF1649	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	SEG:seg	TIGRFAMs:TIGR00756
UniParc:UPI00025450D2	UniProt:M4E9R0	MapMan:35.1	:	:	:

Description

AT5G41170 (E=2e-170) | pentatricopeptide (PPR) repeat-containing protein

Coordinates

chrA04:-:8186985..8188418

Molecular Weight (calculated)

53856.2 Da

IEP (calculated)

8.674

GRAVY (calculated)

0.056

Length

477 amino acids

Sequence
(BLAST)

001: MATRLLHLHL HRHRLEKGTT LSFNRLLSLS LWFRAFCDYR AILRNSLPFN EALDLFTRMV ESRPLPSTVD FTKLLTAISK SKRFDVVIAL CNHLETLGIP
101: HDLYTCNLVM NCFSRSSQPH LASSFLGKMM KLGFSPDIVT FTSLVNGNRP EDAMYIVNQM GIEPDVVMYT TLIESLCRNG LVDNAMSLFN QMEIKADAVT
201: YTSLVNGLCN SGRLSDAVSL LNDMMRRRIN PDVVTFNALI DGFVKKGKLL EAREVYSEMI RVSVAPDVFT YTSLINGLCM EGRVDEAKEM FYSMEDKGCF
301: PDVVAYTSLI NGFCKSRKVE YGMKLFYEMT QRGLLGNTVT YTALIQGFCQ VGRHKAAQEF FSQMVSRGVS PNIRTYNVLL HGLCLNGKLG KALLIFEDIQ
401: KREIDVNIIT YTIIIQGMCK AGKLRDAVDL FCSLPSKGMK PNVVTYSTMI SGLFREGFKL EAHVLFRKMK EDGVLQN

Best Arabidopsis Sequence Match ( AT5G41170.1 )
(BLAST)

001: MAMRFFQLHR NRLVKGNSGK ALSFSRLLDL SFWVRAFCNY REILRNGLHS LQFNEALDLF THMVESRPLP SIIDFTKLLN VIAKMKKFDV VINLCDHLQI
101: MGVSHDLYTC NLLMNCFCQS SQPYLASSFL GKMMKLGFEP DIVTFTSLIN GFCLGNRMEE AMSMVNQMVE MGIKPDVVMY TTIIDSLCKN GHVNYALSLF
201: DQMENYGIRP DVVMYTSLVN GLCNSGRWRD ADSLLRGMTK RKIKPDVITF NALIDAFVKE GKFLDAEELY NEMIRMSIAP NIFTYTSLIN GFCMEGCVDE
301: ARQMFYLMET KGCFPDVVAY TSLINGFCKC KKVDDAMKIF YEMSQKGLTG NTITYTTLIQ GFGQVGKPNV AQEVFSHMVS RGVPPNIRTY NVLLHCLCYN
401: GKVKKALMIF EDMQKREMDG VAPNIWTYNV LLHGLCYNGK LEKALMVFED MRKREMDIGI ITYTIIIQGM CKAGKVKNAV NLFCSLPSKG VKPNVVTYTT
501: MISGLFREGL KHEAHVLFRK MKEDGVS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At5g41170, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLL3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.