Factsheet for TraesCS6B01G127200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	TraesCS4A01G137900.1	AT4G26630.1	25387881
AT1G62670.1	TraesCS4B01G148100.1	AT4G26630.1	25387881
AT1G62670.1	TraesCS4D01G153300.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	81.1	73.81
HORVU6Hr1G017870.2	Barley	mitochondrion	60.76	69.67
TraesCS6B01G127500.1	Wheat	cytosol	79.36	55.71
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	64.24	51.04
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	65.99	44.95
TraesCS2B01G126900.1	Wheat	cytosol	47.67	42.93
TraesCS1B01G072700.1	Wheat	cytosol	49.71	33.53
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	41.86	32.8
TraesCS1B01G072300.1	Wheat	plastid	53.49	32.39
TraesCS1B01G092600.1	Wheat	plastid	45.64	30.37
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	32.56	29.55
Solyc06g007280.2.1	Tomato	cytosol	21.8	29.41
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	56.4	29.22
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	27.33	28.92
TraesCS7B01G469500.1	Wheat	cytosol	46.8	28.65
TraesCS1B01G073200.1	Wheat	cytosol	24.13	27.39
TraesCS1B01G038200.1	Wheat	mitochondrion	50.29	27.33
TraesCS1B01G072400.1	Wheat	cytosol	54.94	27.19
TraesCS1B01G038400.1	Wheat	cytosol	47.38	26.81
TraesCS1B01G315500.1	Wheat	mitochondrion	25.0	26.79
TraesCS1B01G086000.1	Wheat	plastid	53.2	26.68
TraesCS1B01G075300.1	Wheat	cytosol	45.93	26.47
TraesCS1B01G039700.1	Wheat	cytosol	45.93	25.99
Bra027029.1-P	Field mustard	mitochondrion	17.44	24.69
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	55.52	24.49
TraesCS1B01G085400.1	Wheat	cytosol	45.06	24.18
TraesCS2B01G559900.1	Wheat	cytosol	38.08	24.17
KXG28799	Sorghum	plastid	52.91	23.95
TraesCS1B01G073100.1	Wheat	cytosol	42.15	23.93
TraesCS1B01G085300.1	Wheat	mitochondrion	54.07	23.48
TraesCS1B01G085900.1	Wheat	mitochondrion	54.65	23.1
TraesCS2B01G560300.1	Wheat	cytosol	38.08	23.02
TraesCS6B01G129100.1	Wheat	cytosol, plastid	19.19	22.92
TraesCS1B01G071600.1	Wheat	mitochondrion	55.23	22.41
Zm00001d007531_P001	Maize	plastid	52.91	22.36
TraesCS1B01G038500.1	Wheat	mitochondrion	51.16	22.28
Zm00001d007548_P001	Maize	plastid	52.62	22.24
Solyc06g005220.2.1	Tomato	cytosol	26.16	22.17
Zm00001d007559_P001	Maize	plastid	52.62	22.15
Zm00001d007555_P001	Maize	plastid	52.03	21.99
TraesCS1B01G039200.1	Wheat	mitochondrion	49.13	21.56
TraesCS1B01G039100.1	Wheat	mitochondrion	48.84	21.46
Bra027636.1-P	Field mustard	cytosol	20.06	21.3
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	44.19	21.26
TraesCS6B01G021600.1	Wheat	mitochondrion	44.19	21.23
TraesCS1B01G072900.2	Wheat	mitochondrion	53.78	21.19
PGSC0003DMT400052977	Potato	cytosol	23.84	21.08
TraesCS1B01G092500.1	Wheat	mitochondrion	47.97	21.07
KRH39054	Soybean	cytosol	30.23	20.93
Bra026884.1-P	Field mustard	cytosol	27.91	20.91
TraesCS2B01G560700.1	Wheat	plastid	46.51	20.75
KRH39004	Soybean	cytosol	29.94	20.72
Zm00001d007534_P001	Maize	plastid	46.8	20.72
KRH39072	Soybean	cytosol	29.36	20.36
VIT_12s0028g02320.t01	Wine grape	mitochondrion	28.2	20.34
KRH39112	Soybean	cytosol	29.36	20.32
KRH40513	Soybean	plastid	20.64	20.23
KRH39074	Soybean	cytosol	29.07	20.12
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	41.28	19.86
KRH39057	Soybean	cytosol	28.2	19.52
KXG35774	Sorghum	cytosol, mitochondrion	26.74	19.45
KRH09082	Soybean	cytosol	22.97	19.36
Bra036649.1-P	Field mustard	cytosol	21.8	19.18
VIT_14s0081g00110.t01	Wine grape	cytosol	27.33	19.14
PGSC0003DMT400025067	Potato	cytosol	26.16	18.91
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	27.62	18.81
TraesCS6B01G114300.1	Wheat	cytosol	21.22	18.77
KRH17148	Soybean	mitochondrion	29.65	18.72
PGSC0003DMT400025087	Potato	endoplasmic reticulum	26.74	18.59
KRH08636	Soybean	cytosol	28.2	18.58
KRH39066	Soybean	cytosol	29.94	18.56
Bra006187.1-P	Field mustard	plastid	14.83	17.53
KRH08607	Soybean	cytosol	28.49	17.47
KRH09084	Soybean	plastid	25.87	17.42
KRH08628	Soybean	plastid	27.91	17.39
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	26.45	17.33
PGSC0003DMT400008759	Potato	cytosol	15.99	17.24
AT1G62914.1	Thale cress	mitochondrion	26.45	17.23
KRH08639	Soybean	mitochondrion, plastid	27.91	16.99
KRH31646	Soybean	cytosol	25.58	16.99
PGSC0003DMT400008757	Potato	cytosol	24.42	16.87
PGSC0003DMT400053556	Potato	mitochondrion	22.38	16.78
KRH39050	Soybean	mitochondrion	25.87	16.73
KRH48615	Soybean	mitochondrion	26.45	16.7
KRH08625	Soybean	plastid	27.91	16.67
KRH25652	Soybean	cytosol, golgi	26.16	16.67
AT1G63330.2	Thale cress	cytosol	27.03	16.64
KRH41817	Soybean	mitochondrion	26.74	16.58
Bra026882.1-P	Field mustard	cytosol	25.58	16.48
KRH09121	Soybean	mitochondrion	25.58	16.48
AT3G22470.1	Thale cress	cytosol, mitochondrion	29.65	16.48
VIT_14s0081g00120.t01	Wine grape	plastid	27.91	16.47
KRH08277	Soybean	plastid	27.03	16.4
VIT_14s0030g02280.t01	Wine grape	plastid	26.74	16.4
AT1G63400.1	Thale cress	cytosol, plastid	27.33	16.29
KRH40400	Soybean	plastid	27.33	16.29
KRH08671	Soybean	cytosol, mitochondrion	26.16	16.27
AT1G12620.1	Thale cress	cytosol, mitochondrion	29.36	16.26
AT1G12300.1	Thale cress	mitochondrion	29.94	16.17
TraesCS1B01G084800.1	Wheat	cytosol	21.8	16.16
AT5G16640.1	Thale cress	mitochondrion	23.55	16.07
Solyc06g007300.1.1	Tomato	extracellular	27.62	16.05
VIT_14s0081g00270.t01	Wine grape	plastid	27.03	16.03
Bra026958.1-P	Field mustard	mitochondrion	29.65	16.01
KRH09154	Soybean	mitochondrion	25.87	16.01
AT1G63080.3	Thale cress	mitochondrion	28.49	15.96
PGSC0003DMT400025074	Potato	cytosol	25.58	15.94
Bra026971.1-P	Field mustard	mitochondrion	29.07	15.9
Bra028267.1-P	Field mustard	mitochondrion	28.78	15.81
PGSC0003DMT400056665	Potato	mitochondrion	27.03	15.79
Bra027658.1-P	Field mustard	cytosol, mitochondrion	24.71	15.65
Bra016762.1-P	Field mustard	mitochondrion	27.62	15.65
PGSC0003DMT400056663	Potato	plastid	26.74	15.65
Bra031731.1-P	Field mustard	mitochondrion	22.97	15.55
AT1G12775.1	Thale cress	cytosol, mitochondrion	29.07	15.53
PGSC0003DMT400052971	Potato	mitochondrion	26.74	15.51
PGSC0003DMT400053185	Potato	mitochondrion	26.45	15.42
Solyc06g007740.1.1	Tomato	cytosol	26.45	15.42
Bra025516.1-P	Field mustard	cytosol, mitochondrion	21.22	15.3
AT3G16710.1	Thale cress	mitochondrion	22.38	15.19
Bra036651.1-P	Field mustard	mitochondrion	23.55	15.14
AT1G62930.1	Thale cress	plastid	27.62	15.1
AT1G63130.1	Thale cress	mitochondrion	27.62	15.08
AT1G62720.1	Thale cress	mitochondrion	21.22	15.05
Solyc06g007810.1.1	Tomato	cytosol	11.63	14.93
KRH09097	Soybean	plastid	25.29	14.92
AT1G62670.1	Thale cress	mitochondrion	27.33	14.92
AT1G64580.1	Thale cress	mitochondrion	22.67	14.91
AT1G12700.2	Thale cress	cytosol	26.74	14.89
AT1G62910.1	Thale cress	mitochondrion	27.33	14.87
AT1G63150.1	Thale cress	mitochondrion	27.03	14.79
Bra026954.1-P	Field mustard	mitochondrion	27.91	14.77
AT1G63070.1	Thale cress	mitochondrion	25.29	14.75
Bra027026.1-P	Field mustard	mitochondrion	22.38	14.72
VIT_14s0081g00280.t01	Wine grape	mitochondrion	27.33	14.71
AT1G06580.1	Thale cress	mitochondrion	21.22	14.6
Bra026957.1-P	Field mustard	mitochondrion	25.58	14.59
KRH09095	Soybean	plastid	24.71	14.53
AT1G62590.1	Thale cress	mitochondrion	26.74	14.51
KRH08599	Soybean	cytosol, plastid	27.91	14.35
PGSC0003DMT400008760	Potato	mitochondrion	24.42	14.33
Bra021192.1-P	Field mustard	plastid	20.93	14.29
AT1G64583.1	Thale cress	mitochondrion	21.22	14.26
AT4G26800.2	Thale cress	mitochondrion, plastid	21.22	14.2
AT5G41170.1	Thale cress	mitochondrion	21.51	14.04
Bra026836.1-P	Field mustard	cytosol, mitochondrion	19.48	13.65
PGSC0003DMT400053182	Potato	cytosol	23.55	13.52
AT1G62680.2	Thale cress	plastid	21.51	13.5
PGSC0003DMT400015293	Potato	mitochondrion	23.84	13.44
PGSC0003DMT400015298	Potato	mitochondrion	23.84	13.44
Solyc04g080120.1.1	Tomato	extracellular	23.26	13.07
Bra026401.1-P	Field mustard	plastid	20.06	12.9
KRH12873	Soybean	cytosol	25.58	12.64
VIT_14s0030g02260.t01	Wine grape	cytosol	15.99	12.42
KRH09085	Soybean	mitochondrion	24.13	11.79
AT1G64100.2	Thale cress	cytosol	26.16	11.17
KRH39064	Soybean	cytosol	30.23	10.73
Bra027726.1-P	Field mustard	mitochondrion	14.53	10.62
Bra027656.1-P	Field mustard	cytosol	27.33	9.99
TraesCS6B01G341800.2	Wheat	cytosol	10.47	9.02
Bra016758.1-P	Field mustard	plastid	27.91	8.28
TraesCS1B01G038600.1	Wheat	cytosol	6.1	5.79
TraesCS1B01G038300.1	Wheat	plastid	7.85	4.95
CDX68679	Canola	cytosol	0.29	0.87

Protein Annotations

EnsemblPlants:TraesCS6B01G127200.1	EnsemblPlantsGene:TraesCS6B01G127200	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PFAM:PF01535	PFAM:PF13041
PFscan:PS51375	SUPFAM:SSF81901	TIGRFAMs:TIGR00756	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr6B:+:122964627..122965661

Molecular Weight (calculated)

38655.6 Da

IEP (calculated)

8.131

GRAVY (calculated)

-0.087

Length

344 amino acids

Sequence
(BLAST)

001: MKRTEEALNV LLHKMPNDLP NVISYSVILK SFCDNGRSQL ALDLLQMMAK KGADHSPDVM SYNMVIDGFF KEGEVSKACD LFQEMIRQGI VPAEVTYSSI
101: INALCKARAM DKAEVVLRSM VHNGAQPDAV TYNSLIQGYS TLGQLKEVAR LLKVMRSQGV MPSVVTYNSL MTCLCKHGKT KEAEKIFYSM AVNGRKPDVI
201: SYSILLHGYA KEGSLIDMID LCERMARDGV VPNLHCFNIL INAYAKHGMM DVALLFFEDM LKQGVKPSEF TYLTVISAFC KMGRMDNAME KFREMIDMGV
301: PVDTEVYMCI VEGYFKNGDS VKAKDFITKM KNKDIPNRPQ KGNY

Best Arabidopsis Sequence Match ( AT1G05670.1 )
(BLAST)

001: MKKPFTGLLM KRGTLSSFRN FIQLFSLQSR GLSFSTLTDT RPFPDYSPKK ASVRDTEFVH QITNVIKLRR AEPLRRSLKP YECKFKTDHL IWVLMKIKCD
101: YRLVLDFFDW ARSRRDSNLE SLCIVIHLAV ASKDLKVAQS LISSFWERPK LNVTDSFVQF FDLLVYTYKD WGSDPRVFDV FFQVLVDFGL LREARRVFEK
201: MLNYGLVLSV DSCNVYLTRL SKDCYKTATA IIVFREFPEV GVCWNVASYN IVIHFVCQLG RIKEAHHLLL LMELKGYTPD VISYSTVVNG YCRFGELDKV
301: WKLIEVMKRK GLKPNSYIYG SIIGLLCRIC KLAEAEEAFS EMIRQGILPD TVVYTTLIDG FCKRGDIRAA SKFFYEMHSR DITPDVLTYT AIISGFCQIG
401: DMVEAGKLFH EMFCKGLEPD SVTFTELING YCKAGHMKDA FRVHNHMIQA GCSPNVVTYT TLIDGLCKEG DLDSANELLH EMWKIGLQPN IFTYNSIVNG
501: LCKSGNIEEA VKLVGEFEAA GLNADTVTYT TLMDAYCKSG EMDKAQEILK EMLGKGLQPT IVTFNVLMNG FCLHGMLEDG EKLLNWMLAK GIAPNATTFN
601: SLVKQYCIRN NLKAATAIYK DMCSRGVGPD GKTYENLVKG HCKARNMKEA WFLFQEMKGK GFSVSVSTYS VLIKGFLKRK KFLEAREVFD QMRREGLAAD
701: KEIFDFFSDT KYKGKRPDTI VDPIDEIIEN YLVDEQLRGA N

Arabidopsis Description

Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A068FPW3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.