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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400008759 Potato cytosol 59.9 73.04
Solyc06g007280.2.1 Tomato cytosol 43.96 67.06
PGSC0003DMT400052971 Potato mitochondrion 96.92 63.58
Solyc06g007300.1.1 Tomato extracellular 89.46 58.78
PGSC0003DMT400025067 Potato cytosol 69.41 56.72
PGSC0003DMT400025087 Potato endoplasmic reticulum 71.72 56.36
PGSC0003DMT400008757 Potato cytosol 67.35 52.61
PGSC0003DMT400025074 Potato cytosol 74.04 52.17
PGSC0003DMT400056665 Potato mitochondrion 75.58 49.92
PGSC0003DMT400053185 Potato mitochondrion 75.06 49.49
PGSC0003DMT400056663 Potato plastid 73.78 48.81
PGSC0003DMT400008760 Potato mitochondrion 71.98 47.78
PGSC0003DMT400053182 Potato cytosol 70.44 45.74
PGSC0003DMT400053556 Potato mitochondrion 51.67 43.79
CDY26589 Canola cytosol 6.68 37.68
Bra027636.1-P Field mustard cytosol 31.36 37.65
CDY09968 Canola cytosol 27.76 36.73
Bra027029.1-P Field mustard mitochondrion 22.62 36.21
CDY06217 Canola cytosol 27.25 36.18
CDY16110 Canola extracellular 36.5 34.63
Bra026884.1-P Field mustard cytosol 40.36 34.2
CDY51169 Canola cytosol 37.02 34.04
CDY16033 Canola cytosol 13.11 34.0
VIT_14s0081g00110.t01 Wine grape cytosol 42.42 33.6
PGSC0003DMT400015293 Potato mitochondrion 51.67 32.95
PGSC0003DMT400015298 Potato mitochondrion 51.67 32.95
CDY34688 Canola cytosol 29.56 31.77
VIT_14s0030g02260.t01 Wine grape cytosol 35.73 31.38
CDY16002 Canola cytosol 24.68 30.87
Bra006187.1-P Field mustard plastid 22.88 30.58
CDY46909 Canola mitochondrion 22.88 30.48
CDX71969 Canola cytosol 30.85 30.3
VIT_14s0081g00270.t01 Wine grape plastid 44.73 30.0
Bra036649.1-P Field mustard cytosol 29.56 29.41
CDY39810 Canola cytosol 29.56 29.41
CDY26588 Canola extracellular 24.42 29.32
CDY03257 Canola cytosol 29.31 29.16
CDY16031 Canola cytosol 23.14 28.94
VIT_12s0028g02320.t01 Wine grape mitochondrion 35.48 28.93
KRH70370 Soybean cytosol 39.85 28.49
VIT_14s0081g00120.t01 Wine grape plastid 42.67 28.47
CDY26607 Canola cytosol 33.16 28.23
HORVU1Hr1G011250.1 Barley cytosol 21.34 28.14
CDX67634 Canola cytosol 30.08 27.66
KRH09256 Soybean mitochondrion 39.59 27.55
Bra031731.1-P Field mustard mitochondrion 35.22 26.97
Bra026882.1-P Field mustard cytosol 36.76 26.78
VIT_14s0081g00280.t01 Wine grape mitochondrion 43.7 26.6
KRH49698 Soybean cytosol 38.82 26.49
AT1G63330.2 Thale cress cytosol 38.05 26.48
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 20.05 26.26
KRH38755 Soybean mitochondrion 39.85 26.09
AT3G22470.1 Thale cress cytosol, mitochondrion 41.13 25.85
CDY08386 Canola cytosol 29.56 25.84
KRH75045 Soybean mitochondrion 39.33 25.63
CDY34375 Canola mitochondrion 33.93 25.53
AT1G12620.1 Thale cress cytosol, mitochondrion 40.36 25.28
AT5G16640.1 Thale cress mitochondrion 32.65 25.2
KRH75063 Soybean mitochondrion, plastid 39.07 25.17
AT1G12700.2 Thale cress cytosol 39.85 25.08
Bra026836.1-P Field mustard cytosol, mitochondrion 31.62 25.05
CDY35831 Canola mitochondrion 33.16 25.05
Bra027658.1-P Field mustard cytosol, mitochondrion 34.96 25.05
Bra025516.1-P Field mustard cytosol, mitochondrion 30.59 24.95
CDX69436 Canola plastid 31.88 24.9
CDY25492 Canola mitochondrion 31.36 24.85
KRH75048 Soybean mitochondrion 38.82 24.84
CDY66357 Canola cytosol 24.16 24.8
CDY33797 Canola mitochondrion 32.39 24.61
Bra026957.1-P Field mustard mitochondrion 38.05 24.54
CDY48949 Canola mitochondrion 30.33 24.53
AT1G12300.1 Thale cress mitochondrion 39.85 24.33
AT1G62930.1 Thale cress plastid 39.33 24.32
Bra027026.1-P Field mustard mitochondrion 32.65 24.28
CDY00489 Canola mitochondrion 36.5 24.23
CDY46394 Canola mitochondrion 29.82 24.12
Bra026958.1-P Field mustard mitochondrion 39.33 24.02
AT1G63150.1 Thale cress mitochondrion 38.82 24.01
CDY26593 Canola cytosol 37.53 23.97
Bra028267.1-P Field mustard mitochondrion 38.56 23.96
CDY49646 Canola mitochondrion 30.85 23.95
CDY65983 Canola mitochondrion 25.96 23.93
AT1G62720.1 Thale cress mitochondrion 29.82 23.92
AT1G62680.2 Thale cress plastid 33.68 23.91
CDY26565 Canola mitochondrion 34.96 23.9
TraesCS6B01G127200.1 Wheat cytosol 21.08 23.84
TraesCS2B01G126900.1 Wheat cytosol 23.39 23.82
CDY31272 Canola mitochondrion 34.7 23.77
Bra036651.1-P Field mustard mitochondrion 32.65 23.74
Bra026971.1-P Field mustard mitochondrion 38.3 23.69
AT1G62910.1 Thale cress mitochondrion 38.3 23.58
Os10t0501700-00 Rice cytosol 27.51 23.57
AT1G64580.1 Thale cress mitochondrion 31.62 23.52
AT1G62590.1 Thale cress mitochondrion 38.3 23.5
AT1G63130.1 Thale cress mitochondrion 38.05 23.49
AT1G64583.1 Thale cress mitochondrion 30.85 23.44
KRH58843 Soybean nucleus 36.76 23.4
AT1G06580.1 Thale cress mitochondrion 30.08 23.4
VIT_14s0030g02280.t01 Wine grape plastid 33.68 23.35
AT1G12775.1 Thale cress cytosol, mitochondrion 38.56 23.29
CDY46912 Canola mitochondrion 29.56 23.28
Bra026954.1-P Field mustard mitochondrion 38.82 23.23
AT1G63070.1 Thale cress mitochondrion 35.22 23.22
AT1G62670.1 Thale cress mitochondrion 37.53 23.17
AT5G41170.1 Thale cress mitochondrion 31.36 23.15
AT1G63080.3 Thale cress mitochondrion 36.5 23.13
KRH42744 Soybean mitochondrion 36.25 23.08
Bra016762.1-P Field mustard mitochondrion 35.99 23.06
CDY68929 Canola mitochondrion 35.99 23.06
Bra021192.1-P Field mustard plastid 29.56 22.82
HORVU1Hr1G018190.2 Barley cytosol 16.71 22.81
CDY34969 Canola mitochondrion 29.56 22.73
AT3G16710.1 Thale cress mitochondrion 29.31 22.49
CDY15970 Canola cytosol 5.4 22.34
CDY33753 Canola mitochondrion 25.19 22.07
AT4G26800.2 Thale cress mitochondrion, plastid 28.79 21.79
TraesCS6A01G083000.1 Wheat cytosol 25.45 21.71
TraesCS1D01G058400.1 Wheat cytosol 28.53 21.55
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 30.33 21.49
TraesCS6D01G017800.1 Wheat cytosol 29.56 21.42
CDY31271 Canola mitochondrion 26.74 21.4
AT1G63400.1 Thale cress cytosol, plastid 31.36 21.14
HORVU0Hr1G035310.1 Barley cytosol 31.36 20.96
TraesCS1A01G067700.1 Wheat extracellular 17.99 20.77
KXG35774 Sorghum cytosol, mitochondrion 25.19 20.72
CDY29251 Canola mitochondrion 26.99 20.71
TraesCS6D01G017700.1 Wheat plastid 28.02 20.41
Bra026401.1-P Field mustard plastid 28.02 20.37
CDX89301 Canola plastid 28.02 20.37
CDY66358 Canola mitochondrion 20.31 20.26
Os10t0497366-00 Rice mitochondrion 20.82 20.2
CDY25522 Canola mitochondrion, plastid 23.14 20.13
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 19.54 20.11
TraesCS1B01G038400.1 Wheat cytosol 31.11 19.9
TraesCS2B01G560300.1 Wheat cytosol 29.05 19.86
TraesCS6B01G114300.1 Wheat cytosol 19.79 19.79
Bra027726.1-P Field mustard mitochondrion 23.91 19.75
CDY25519 Canola mitochondrion, plastid 32.13 19.56
TraesCS1D01G058000.1 Wheat cytosol 20.31 19.46
CDY47835 Canola mitochondrion 21.85 19.45
CDY28348 Canola mitochondrion, plastid 29.82 19.4
TraesCS7B01G469500.1 Wheat cytosol 28.02 19.39
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 25.45 19.37
TraesCS2B01G559900.1 Wheat cytosol 26.99 19.37
AT1G62914.1 Thale cress mitochondrion 25.96 19.13
TraesCS1B01G075300.1 Wheat cytosol 29.31 19.1
TraesCS1A01G054800.1 Wheat cytosol 28.53 19.07
TraesCS1B01G085400.1 Wheat cytosol 31.36 19.03
TraesCS6A01G014600.1 Wheat cytosol 19.28 18.99
TraesCS1B01G039700.1 Wheat cytosol 29.56 18.91
TraesCS1B01G073100.1 Wheat cytosol 29.31 18.81
TraesCS1D01G056700.1 Wheat cytosol 29.31 18.78
TraesCS1B01G072700.1 Wheat cytosol 24.42 18.63
TraesCS6D01G083300.1 Wheat mitochondrion 21.34 18.61
TraesCS1D01G055300.1 Wheat cytosol 29.56 18.61
Zm00001d018982_P001 Maize mitochondrion 16.71 18.57
CDY34870 Canola mitochondrion 13.62 18.47
TraesCS2A01G531100.1 Wheat cytosol 26.99 18.45
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 29.82 18.15
TraesCS1A01G031600.1 Wheat cytosol 30.59 17.98
TraesCS2A01G531000.1 Wheat golgi 31.11 17.82
OQU82831 Sorghum cytosol 27.76 17.62
AT1G64100.2 Thale cress cytosol 36.25 17.49
TraesCS2D01G533000.1 Wheat cytosol, extracellular 29.56 17.45
HORVU6Hr1G017870.2 Barley mitochondrion 13.37 17.33
KXG34536 Sorghum mitochondrion 25.45 17.31
TraesCS1B01G038200.1 Wheat mitochondrion 28.02 17.22
Os10t0495100-01 Rice cytosol, mitochondrion 20.31 17.14
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 19.28 17.08
TraesCS6B01G021600.1 Wheat mitochondrion 31.11 16.9
TraesCS2D01G532500.1 Wheat plastid 29.31 16.76
CDX68680 Canola mitochondrion 19.79 16.67
TraesCS1B01G084800.1 Wheat cytosol 19.79 16.59
TraesCS2A01G526200.1 Wheat golgi 29.05 16.59
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 28.28 16.57
TraesCS6B01G127500.1 Wheat cytosol 20.82 16.53
TraesCS1A01G067000.1 Wheat mitochondrion 30.33 16.48
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 29.56 16.45
CDY16032 Canola mitochondrion 17.22 16.42
TraesCS2D01G532400.1 Wheat cytosol 25.71 16.37
TraesCS1A01G073700.1 Wheat cytosol 16.2 16.36
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 29.31 16.36
TraesCS2D01G532100.1 Wheat mitochondrion 29.05 16.33
TraesCSU01G090200.1 Wheat cytosol 18.51 16.29
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 20.05 16.22
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 20.05 16.12
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 27.76 16.05
TraesCS6D01G083400.1 Wheat mitochondrion 20.31 16.02
TraesCS1B01G072400.1 Wheat cytosol 28.53 15.97
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 29.31 15.97
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 29.31 15.94
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 29.05 15.8
TraesCS6D01G083100.1 Wheat cytosol 19.79 15.71
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 20.31 15.71
Os08t0248400-01 Rice mitochondrion 17.74 15.68
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 20.31 15.64
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 28.53 15.52
TraesCS1A01G031700.1 Wheat plastid 29.56 15.52
HORVU6Hr1G014310.1 Barley mitochondrion 27.25 15.43
TraesCS6A01G015000.1 Wheat mitochondrion 16.45 15.42
TraesCS1B01G072300.1 Wheat plastid 22.36 15.32
TraesCS2A01G530600.1 Wheat cytosol 30.08 15.29
TraesCS1D01G068700.1 Wheat cytosol 17.22 15.26
CDY34370 Canola cytosol 32.13 15.23
TraesCS2D01G532300.1 Wheat plastid 30.33 15.17
TraesCSU01G089700.1 Wheat mitochondrion 18.77 15.15
TraesCS1B01G039100.1 Wheat mitochondrion 30.33 15.07
TraesCS1B01G038500.1 Wheat mitochondrion 30.59 15.06
EES07882 Sorghum cytosol 30.08 15.06
Zm00001d007534_P001 Maize plastid 30.08 15.06
KXG28799 Sorghum plastid 29.31 15.0
TraesCS1B01G085900.1 Wheat mitochondrion 31.36 14.99
TraesCS6D01G047700.1 Wheat mitochondrion 26.48 14.91
TraesCS1A01G057300.1 Wheat cytosol 27.51 14.9
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 30.33 14.9
TraesCS1A01G067600.1 Wheat mitochondrion 31.11 14.88
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 30.08 14.87
EES09203 Sorghum cytosol 30.33 14.79
KXG27690 Sorghum cytosol, plastid 27.76 14.77
Os08t0107800-01 Rice mitochondrion 23.65 14.74
OQU82833 Sorghum cytosol 16.97 14.73
OQU80148 Sorghum mitochondrion 27.51 14.72
Zm00001d009733_P001 Maize cytosol 30.08 14.72
TraesCS1A01G067400.1 Wheat mitochondrion 31.11 14.67
TraesCS1B01G085300.1 Wheat mitochondrion 29.82 14.65
TraesCS1D01G076500.1 Wheat mitochondrion 24.94 14.61
Os10t0495200-01 Rice mitochondrion 29.31 14.58
TraesCS2D01G532600.1 Wheat plastid 29.05 14.56
OQU88594 Sorghum cytosol 19.54 14.56
OQU82856 Sorghum cytosol 28.02 14.49
EER95949 Sorghum mitochondrion 24.68 14.48
TraesCS6D01G290900.1 Wheat mitochondrion 27.25 14.46
HORVU1Hr1G004750.6 Barley plastid 29.56 14.41
TraesCS1D01G068500.1 Wheat mitochondrion 30.08 14.41
Zm00001d007555_P001 Maize plastid 30.08 14.37
Os10t0497300-01 Rice mitochondrion 29.31 14.36
TraesCS1D01G069100.1 Wheat mitochondrion 23.65 14.31
CDX81633 Canola extracellular, golgi, plasma membrane 33.42 14.3
TraesCS1B01G039200.1 Wheat mitochondrion 28.79 14.29
TraesCS1B01G086000.1 Wheat plastid 25.19 14.29
Zm00001d007548_P001 Maize plastid 29.82 14.25
TraesCS1A01G054500.1 Wheat mitochondrion 28.53 14.23
Os10t0499500-01 Rice mitochondrion 18.51 14.23
OQU82836 Sorghum cytosol 22.36 14.22
Zm00001d007559_P001 Maize plastid 29.82 14.2
HORVU0Hr1G031920.1 Barley plastid 31.36 14.19
HORVU1Hr1G010970.1 Barley mitochondrion 30.08 14.16
TraesCS1D01G068900.1 Wheat mitochondrion 29.56 14.15
Zm00001d007531_P001 Maize plastid 29.56 14.13
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 28.28 14.1
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 15.68 14.09
TraesCS1A01G054700.2 Wheat mitochondrion 29.31 14.04
TraesCS1D01G068800.1 Wheat plastid 29.31 13.97
TraesCS2B01G560700.1 Wheat plastid 27.51 13.88
TraesCS1D01G068400.1 Wheat mitochondrion 29.31 13.85
TraesCS1D01G056200.1 Wheat mitochondrion 29.31 13.82
TraesCS1B01G071600.1 Wheat mitochondrion 30.08 13.8
TraesCS6B01G341800.2 Wheat cytosol 14.14 13.78
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 29.31 13.73
HORVU6Hr1G002890.6 Barley cytosol, plastid 28.02 13.71
TraesCS1A01G056000.1 Wheat cytosol 14.14 13.68
OQU82823 Sorghum cytosol 28.02 13.68
HORVU1Hr1G011160.2 Barley cytosol, plastid 31.36 13.63
TraesCS1D01G033000.1 Wheat cytosol 14.14 13.61
HORVU1Hr1G011150.1 Barley cytosol, plastid 30.85 13.59
OQU82827 Sorghum cytosol 27.76 13.55
TraesCS6A01G311600.1 Wheat mitochondrion 29.05 13.52
TraesCS1D01G076700.1 Wheat cytosol 11.57 13.47
TraesCS6D01G076500.1 Wheat plastid 15.68 13.47
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 26.48 13.45
TraesCS1B01G072900.2 Wheat mitochondrion 30.08 13.4
Bra027656.1-P Field mustard cytosol 32.39 13.39
HORVU6Hr1G076780.7 Barley mitochondrion 28.28 13.35
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 16.45 13.33
HORVU1Hr1G010890.5 Barley cytosol 30.59 13.25
TraesCS1B01G038600.1 Wheat cytosol 12.34 13.22
TraesCS1B01G073200.1 Wheat cytosol 10.28 13.2
Bra016758.1-P Field mustard plastid 39.33 13.2
Os04t0351333-00 Rice cytosol 29.82 13.2
TraesCS7D01G231400.1 Wheat cytosol, plastid 13.62 13.15
TraesCS1B01G092600.1 Wheat plastid 17.22 12.96
HORVU1Hr1G011300.3 Barley plastid 30.59 12.93
TraesCS1A01G055800.1 Wheat mitochondrion 25.45 12.84
HORVU1Hr1G014060.1 Barley plastid 29.31 12.81
TraesCS1B01G092500.1 Wheat mitochondrion 25.71 12.77
HORVU1Hr1G013810.1 Barley plastid 27.51 12.75
HORVU1Hr1G014040.1 Barley mitochondrion 27.25 12.73
KXG19780 Sorghum cytosol 19.28 12.69
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 12.34 12.66
TraesCS1D01G068600.1 Wheat plastid 11.05 12.65
TraesCSU01G089800.1 Wheat mitochondrion 11.31 12.54
TraesCS1D01G067600.1 Wheat cytosol 11.57 12.33
Os08t0110200-01 Rice mitochondrion 25.19 12.28
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 22.62 12.27
Os04t0349600-01 Rice plastid 12.08 12.14
Os08t0107700-01 Rice cytosol, mitochondrion 11.57 12.03
CDY16003 Canola cytosol, plastid 12.08 12.02
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 10.03 12.0
CDY31277 Canola plastid 29.05 11.78
TraesCS1A01G067800.1 Wheat cytosol 11.31 11.76
TraesCS1A01G073600.1 Wheat mitochondrion 11.83 11.73
CDY34680 Canola cytosol 27.51 11.73
Zm00001d009735_P001 Maize cytosol 29.31 11.72
TraesCS1D01G076400.1 Wheat cytosol 10.54 11.29
TraesCS2D01G532200.1 Wheat cytosol 8.48 11.26
TraesCS1A01G055600.1 Wheat cytosol 9.25 11.08
TraesCS1D01G057700.1 Wheat cytosol 9.25 11.08
TraesCS1D01G076900.1 Wheat plastid 18.25 10.81
TraesCS1B01G315500.1 Wheat mitochondrion 8.74 10.59
OQU82834 Sorghum cytosol 25.45 10.28
OQU82832 Sorghum cytosol 7.46 10.14
OQU88581 Sorghum cytosol 28.02 10.03
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 8.74 9.94
TraesCS1D01G057800.1 Wheat mitochondrion 8.74 9.37
TraesCS1A01G073800.1 Wheat mitochondrion 7.97 9.31
HORVU1Hr1G011400.44 Barley plastid 13.62 8.6
TraesCS1D01G058500.1 Wheat plastid 12.08 8.25
TraesCS1B01G038300.1 Wheat plastid 11.31 8.06
Os10t0497432-01 Rice mitochondrion 3.08 4.51
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 2.83 4.35
TraesCS1A01G074000.1 Wheat mitochondrion 1.8 2.47
TraesCS6B01G129100.1 Wheat cytosol, plastid 1.29 1.74
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 0.51 0.88
TraesCS1A01G066600.1 Wheat mitochondrion 0.51 0.76
TraesCS1A01G055500.1 Wheat mitochondrion 0.26 0.46
CDY21063 Canola plastid 0.0 0.0
TraesCS1D01G056600.1 Wheat mitochondrion 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400052977EnsemblPlantsGene:PGSC0003DMG402020557Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF1
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG402020557SUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI000295134BUniProt:M1BU78MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG402020557]
Coordinates
chr6:+:3048215..3053885
Molecular Weight (calculated)
44225.2 Da
IEP (calculated)
5.512
GRAVY (calculated)
-0.057
Length
389 amino acids
Sequence
(BLAST)
001: MEQGNTEPDI YIYNIVIDAL CKDGNLDAAI NILNEMKQKD IHPDILTYNS FINGLCKLGQ WEKVKTWFSE MVNLNIYPDV RIFNILIDGL CKEGKVEDAE
101: EVMKHMVRKG VEPDIITYNA IMDGYCLRGQ VDRARRIFNI MIDKGIEPNI ISYNILINGY CMKKEVNDAM QLFCEISQKG SKPNVVTYNT ILQGLFKVGR
201: IGHAKQFFAE MLSAGFIPDF YTHGIVLNGY FKYGLVEEAL SLFNKLEGKR ENTDIELYNV VIGGLGNNGK LNEARAIFEK LSLIGLLPNA RTYNIMIHGL
301: CLEGLLDEAN DMLRKMEENG YMPNIFTYNV LVRGFLRCSK ITEMTTFMKE MTGRGFSFDA TTTGLLVNVL RESPSVLDMI LELHSKIMK
Best Arabidopsis Sequence Match ( AT1G12620.1 )
(BLAST)
001: MRGLIQTRLL ETGTLRTALF LSCYGRVFSS VSDGKGKVSY RERLRSGIVD IKEDDAVDLF QEMTRSRPRP RLIDFSRLFS VVARTKQYDL VLDLCKQMEL
101: KGIAHNLYTL SIMINCCCRC RKLSLAFSAM GKIIKLGYEP DTVTFSTLIN GLCLEGRVSE ALELVDRMVE MGHKPTLITL NALVNGLCLN GKVSDAVLLI
201: DRMVETGFQP NEVTYGPVLK VMCKSGQTAL AMELLRKMEE RKIKLDAVKY SIIIDGLCKD GSLDNAFNLF NEMEIKGFKA DIIIYTTLIR GFCYAGRWDD
301: GAKLLRDMIK RKITPDVVAF SALIDCFVKE GKLREAEELH KEMIQRGISP DTVTYTSLID GFCKENQLDK ANHMLDLMVS KGCGPNIRTF NILINGYCKA
401: NLIDDGLELF RKMSLRGVVA DTVTYNTLIQ GFCELGKLEV AKELFQEMVS RRVRPDIVSY KILLDGLCDN GEPEKALEIF EKIEKSKMEL DIGIYNIIIH
501: GMCNASKVDD AWDLFCSLPL KGVKPDVKTY NIMIGGLCKK GSLSEADLLF RKMEEDGHSP NGCTYNILIR AHLGEGDATK SAKLIEEIKR CGFSVDASTV
601: KMVVDMLSDG RLKKSFLDML S
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12620 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASZ8]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.