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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g005220.2.1 Tomato cytosol 63.77 86.7
PGSC0003DMT400008757 Potato cytosol 68.84 76.31
PGSC0003DMT400025087 Potato endoplasmic reticulum 67.57 75.35
PGSC0003DMT400052977 Potato cytosol 52.17 74.04
PGSC0003DMT400008759 Potato cytosol 42.75 73.98
PGSC0003DMT400025067 Potato cytosol 62.5 72.48
PGSC0003DMT400056663 Potato plastid 76.45 71.77
PGSC0003DMT400056665 Potato mitochondrion 76.09 71.31
PGSC0003DMT400008760 Potato mitochondrion 75.18 70.82
PGSC0003DMT400052971 Potato mitochondrion 75.91 70.66
PGSC0003DMT400053185 Potato mitochondrion 74.82 70.0
PGSC0003DMT400053556 Potato mitochondrion 56.88 68.41
PGSC0003DMT400053182 Potato cytosol 71.01 65.44
PGSC0003DMT400015293 Potato mitochondrion 53.99 48.85
PGSC0003DMT400015298 Potato mitochondrion 53.99 48.85
VIT_12s0028g02320.t01 Wine grape mitochondrion 36.78 42.56
VIT_14s0081g00270.t01 Wine grape plastid 44.02 41.9
VIT_14s0081g00120.t01 Wine grape plastid 42.39 40.14
Bra027636.1-P Field mustard cytosol 23.55 40.12
VIT_14s0081g00110.t01 Wine grape cytosol 34.78 39.1
CDY16110 Canola extracellular 28.44 38.29
Bra027029.1-P Field mustard mitochondrion 16.85 38.27
KRH70370 Soybean cytosol 37.5 38.05
Bra036649.1-P Field mustard cytosol 26.63 37.6
CDY03257 Canola cytosol 26.63 37.6
CDY39810 Canola cytosol 26.63 37.6
CDY51169 Canola cytosol 28.8 37.59
VIT_14s0081g00280.t01 Wine grape mitochondrion 42.03 36.31
CDX71969 Canola cytosol 25.91 36.11
CDY09968 Canola cytosol 19.2 36.05
VIT_14s0030g02280.t01 Wine grape plastid 36.41 35.83
KRH49698 Soybean cytosol 36.96 35.79
Bra026882.1-P Field mustard cytosol 34.6 35.77
CDY46909 Canola mitochondrion 18.84 35.62
CDY34870 Canola mitochondrion 18.48 35.54
CDY06217 Canola cytosol 18.84 35.49
CDY16002 Canola cytosol 19.75 35.05
CDY33797 Canola mitochondrion 32.43 34.96
AT1G63330.2 Thale cress cytosol 35.33 34.88
Bra026884.1-P Field mustard cytosol 28.99 34.86
Bra031731.1-P Field mustard mitochondrion 32.07 34.84
CDY16031 Canola cytosol 19.57 34.73
CDY25492 Canola mitochondrion 30.8 34.62
CDY65983 Canola mitochondrion 26.45 34.6
CDY34688 Canola cytosol 22.64 34.53
CDX67634 Canola cytosol 26.45 34.52
CDY00489 Canola mitochondrion 36.59 34.47
AT1G62720.1 Thale cress mitochondrion 30.25 34.43
CDY26607 Canola cytosol 28.44 34.35
CDY26588 Canola extracellular 20.11 34.26
CDY34969 Canola mitochondrion 31.34 34.19
KRH75045 Soybean mitochondrion 36.96 34.17
AT5G16640.1 Thale cress mitochondrion 31.16 34.13
Bra021192.1-P Field mustard plastid 30.98 33.93
Bra026958.1-P Field mustard mitochondrion 39.13 33.91
AT1G62930.1 Thale cress plastid 38.59 33.86
AT1G63150.1 Thale cress mitochondrion 38.59 33.86
AT3G22470.1 Thale cress cytosol, mitochondrion 37.86 33.76
KRH75048 Soybean mitochondrion 36.96 33.55
KRH42744 Soybean mitochondrion 37.14 33.55
KRH58843 Soybean nucleus 37.14 33.55
Bra028267.1-P Field mustard mitochondrion 38.04 33.55
AT1G12700.2 Thale cress cytosol 37.5 33.5
AT1G63130.1 Thale cress mitochondrion 38.22 33.49
KRH09256 Soybean mitochondrion 33.88 33.45
CDY46912 Canola mitochondrion 29.89 33.4
AT3G16710.1 Thale cress mitochondrion 30.62 33.33
CDY31272 Canola mitochondrion 34.24 33.27
Bra027026.1-P Field mustard mitochondrion 31.52 33.27
KRH38755 Soybean mitochondrion 35.51 33.0
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 32.79 32.97
Bra016762.1-P Field mustard mitochondrion 36.23 32.95
CDY68929 Canola mitochondrion 36.23 32.95
Bra026971.1-P Field mustard mitochondrion 37.5 32.91
AT1G62680.2 Thale cress plastid 32.61 32.85
KRH75063 Soybean mitochondrion, plastid 35.87 32.78
CDY26565 Canola mitochondrion 33.7 32.69
CDY26593 Canola cytosol 36.05 32.68
Bra026957.1-P Field mustard mitochondrion 35.69 32.67
Bra006187.1-P Field mustard plastid 17.21 32.65
AT1G12620.1 Thale cress cytosol, mitochondrion 36.59 32.53
Bra036651.1-P Field mustard mitochondrion 31.52 32.52
AT1G12300.1 Thale cress mitochondrion 37.32 32.34
AT1G62910.1 Thale cress mitochondrion 36.78 32.12
AT1G62670.1 Thale cress mitochondrion 36.59 32.06
AT1G62590.1 Thale cress mitochondrion 36.78 32.02
AT1G63080.3 Thale cress mitochondrion 35.51 31.92
AT1G64583.1 Thale cress mitochondrion 29.53 31.84
AT1G06580.1 Thale cress mitochondrion 28.8 31.8
Bra026836.1-P Field mustard cytosol, mitochondrion 28.26 31.77
AT1G63400.1 Thale cress cytosol, plastid 33.15 31.72
CDY31271 Canola mitochondrion 27.9 31.69
CDY08386 Canola cytosol 25.54 31.69
Bra025516.1-P Field mustard cytosol, mitochondrion 27.36 31.66
CDX69436 Canola plastid 28.44 31.53
AT1G63070.1 Thale cress mitochondrion 33.7 31.53
Bra026954.1-P Field mustard mitochondrion 36.96 31.38
CDY16032 Canola mitochondrion 23.19 31.37
CDY34375 Canola mitochondrion 29.35 31.33
CDY66358 Canola mitochondrion 22.1 31.28
CDY46394 Canola mitochondrion 26.99 30.98
CDY48949 Canola mitochondrion 26.99 30.98
VIT_14s0030g02260.t01 Wine grape cytosol 24.82 30.93
AT1G12775.1 Thale cress cytosol, mitochondrion 35.87 30.75
CDY35831 Canola mitochondrion 28.62 30.68
AT1G62914.1 Thale cress mitochondrion 29.17 30.49
CDY26589 Canola cytosol 3.8 30.43
Bra027658.1-P Field mustard cytosol, mitochondrion 29.71 30.2
AT5G41170.1 Thale cress mitochondrion 28.8 30.17
CDY16033 Canola cytosol 8.15 30.0
CDY49646 Canola mitochondrion 27.17 29.94
CDY16003 Canola cytosol, plastid 20.83 29.41
CDY33753 Canola mitochondrion 23.55 29.28
CDY28348 Canola mitochondrion, plastid 31.7 29.26
AT1G64580.1 Thale cress mitochondrion 27.54 29.06
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 15.4 28.62
AT4G26800.2 Thale cress mitochondrion, plastid 26.63 28.6
CDY25519 Canola mitochondrion, plastid 32.07 27.7
CDY25522 Canola mitochondrion, plastid 22.28 27.52
Bra027726.1-P Field mustard mitochondrion 23.37 27.39
CDY47835 Canola mitochondrion 21.56 27.23
CDY29251 Canola mitochondrion 24.82 27.02
HORVU1Hr1G018190.2 Barley cytosol 13.95 27.02
TraesCS1A01G067700.1 Wheat extracellular 16.3 26.71
TraesCS2B01G126900.1 Wheat cytosol 18.48 26.7
Os10t0501700-00 Rice cytosol 21.92 26.65
CDX68680 Canola mitochondrion 22.28 26.62
Bra026401.1-P Field mustard plastid 25.54 26.36
CDX89301 Canola plastid 25.54 26.36
CDY66357 Canola cytosol 17.93 26.12
HORVU1Hr1G011250.1 Barley cytosol 13.95 26.1
Zm00001d018982_P001 Maize mitochondrion 16.49 26.0
TraesCS6B01G127200.1 Wheat cytosol 15.94 25.58
HORVU6Hr1G017870.2 Barley mitochondrion 13.59 25.0
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 17.03 24.87
TraesCSU01G089800.1 Wheat mitochondrion 15.76 24.79
Os10t0495100-01 Rice cytosol, mitochondrion 20.47 24.51
TraesCS1D01G058000.1 Wheat cytosol 17.93 24.38
AT1G64100.2 Thale cress cytosol 35.51 24.32
TraesCS6A01G015000.1 Wheat mitochondrion 18.12 24.1
TraesCSU01G090200.1 Wheat cytosol 19.02 23.76
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 13.95 23.69
Os10t0497366-00 Rice mitochondrion 17.21 23.69
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 21.74 23.48
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 18.66 23.46
TraesCSU01G089700.1 Wheat mitochondrion 20.29 23.24
Os08t0248400-01 Rice mitochondrion 18.48 23.18
TraesCS6D01G083300.1 Wheat mitochondrion 18.66 23.09
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 20.65 22.66
KXG34536 Sorghum mitochondrion 23.37 22.55
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 15.4 22.43
TraesCS7D01G231400.1 Wheat cytosol, plastid 16.3 22.33
TraesCS6D01G076500.1 Wheat plastid 18.3 22.3
TraesCS6D01G083100.1 Wheat cytosol 19.75 22.24
TraesCS1D01G058400.1 Wheat cytosol 20.65 22.14
Os10t0499500-01 Rice mitochondrion 20.29 22.13
TraesCS6D01G083400.1 Wheat mitochondrion 19.75 22.11
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 19.38 22.11
TraesCS6D01G017800.1 Wheat cytosol 21.38 21.97
TraesCS1B01G072700.1 Wheat cytosol 20.29 21.96
TraesCS6B01G127500.1 Wheat cytosol 19.38 21.84
TraesCS1B01G038200.1 Wheat mitochondrion 25.0 21.8
TraesCS1D01G068600.1 Wheat plastid 13.41 21.76
TraesCS6A01G083000.1 Wheat cytosol 17.93 21.71
HORVU6Hr1G014310.1 Barley mitochondrion 26.99 21.69
OQU88594 Sorghum cytosol 20.47 21.65
TraesCS7B01G469500.1 Wheat cytosol 21.92 21.53
TraesCS1B01G085400.1 Wheat cytosol 25.0 21.53
CDY34370 Canola cytosol 31.88 21.44
EER95949 Sorghum mitochondrion 25.72 21.42
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 19.57 21.39
TraesCS6B01G021600.1 Wheat mitochondrion 27.72 21.37
CDX81633 Canola extracellular, golgi, plasma membrane 34.96 21.23
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 18.48 21.21
TraesCS6D01G017700.1 Wheat plastid 20.47 21.16
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 27.36 21.15
Os08t0107700-01 Rice cytosol, mitochondrion 14.31 21.12
TraesCS1B01G073100.1 Wheat cytosol 23.19 21.12
TraesCS1B01G073200.1 Wheat cytosol 11.59 21.12
TraesCS1D01G055300.1 Wheat cytosol 23.55 21.04
Os08t0107800-01 Rice mitochondrion 23.73 20.99
HORVU0Hr1G035310.1 Barley cytosol 22.1 20.96
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 25.0 20.78
TraesCS1D01G056700.1 Wheat cytosol 22.83 20.76
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 26.81 20.7
OQU82832 Sorghum cytosol 10.69 20.63
TraesCS1B01G038400.1 Wheat cytosol 22.64 20.56
TraesCS1A01G054800.1 Wheat cytosol 21.56 20.45
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 26.45 20.42
TraesCS1B01G315500.1 Wheat mitochondrion 11.78 20.25
CDY15970 Canola cytosol 3.44 20.21
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 17.57 20.21
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 15.76 20.09
TraesCS1B01G072400.1 Wheat cytosol 25.18 20.0
TraesCS6D01G047700.1 Wheat mitochondrion 25.0 19.97
TraesCS1A01G031600.1 Wheat cytosol 23.91 19.94
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 12.32 19.88
EES07882 Sorghum cytosol 27.9 19.82
TraesCS6B01G114300.1 Wheat cytosol 13.95 19.79
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 9.06 19.76
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 24.09 19.76
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 22.83 19.72
TraesCS1A01G031700.1 Wheat plastid 26.45 19.7
TraesCS1D01G068900.1 Wheat mitochondrion 28.99 19.68
Os10t0497300-01 Rice mitochondrion 28.26 19.65
TraesCS1B01G039700.1 Wheat cytosol 21.56 19.57
TraesCS1B01G086000.1 Wheat plastid 24.28 19.53
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 25.18 19.44
TraesCS1B01G075300.1 Wheat cytosol 21.01 19.43
TraesCS1B01G072300.1 Wheat plastid 19.93 19.37
EES09203 Sorghum cytosol 27.9 19.3
OQU82856 Sorghum cytosol 26.27 19.28
TraesCS1A01G067000.1 Wheat mitochondrion 25.0 19.27
KXG35774 Sorghum cytosol, mitochondrion 16.49 19.24
TraesCS2A01G526200.1 Wheat golgi 23.73 19.24
TraesCS6D01G290900.1 Wheat mitochondrion 25.54 19.24
TraesCS1A01G073800.1 Wheat mitochondrion 11.59 19.22
Os10t0495200-01 Rice mitochondrion 27.17 19.18
TraesCS2B01G560300.1 Wheat cytosol 19.75 19.16
TraesCS1B01G092600.1 Wheat plastid 17.93 19.15
Os04t0349600-01 Rice plastid 13.41 19.12
TraesCS2D01G532500.1 Wheat plastid 23.55 19.12
TraesCS1B01G038500.1 Wheat mitochondrion 27.36 19.11
OQU82831 Sorghum cytosol 21.2 19.09
TraesCS1B01G085300.1 Wheat mitochondrion 27.36 19.07
TraesCS1B01G085900.1 Wheat mitochondrion 28.08 19.04
KXG27690 Sorghum cytosol, plastid 25.18 19.02
TraesCS2B01G559900.1 Wheat cytosol 18.66 19.0
TraesCS2A01G531000.1 Wheat golgi 23.37 19.0
Zm00001d009733_P001 Maize cytosol 27.36 18.99
TraesCS1A01G067600.1 Wheat mitochondrion 27.9 18.94
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 23.91 18.88
TraesCS1D01G068500.1 Wheat mitochondrion 27.72 18.84
Bra027656.1-P Field mustard cytosol 32.07 18.81
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 23.73 18.79
OQU82836 Sorghum cytosol 20.83 18.79
TraesCS1A01G067400.1 Wheat mitochondrion 28.08 18.79
TraesCS2D01G532100.1 Wheat mitochondrion 23.55 18.79
TraesCS6A01G014600.1 Wheat cytosol 13.41 18.73
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 26.81 18.69
TraesCS2D01G532400.1 Wheat cytosol 20.65 18.66
TraesCS1B01G039100.1 Wheat mitochondrion 26.45 18.65
TraesCS2A01G531100.1 Wheat cytosol 19.2 18.63
TraesCS1D01G068800.1 Wheat plastid 27.54 18.63
TraesCS1A01G054500.1 Wheat mitochondrion 26.27 18.59
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 26.27 18.59
OQU82823 Sorghum cytosol 26.81 18.57
OQU82827 Sorghum cytosol 26.81 18.57
Zm00001d007534_P001 Maize plastid 26.09 18.53
TraesCS1A01G057300.1 Wheat cytosol 24.09 18.52
TraesCS2D01G533000.1 Wheat cytosol, extracellular 22.1 18.51
TraesCS1D01G057800.1 Wheat mitochondrion 12.14 18.46
TraesCS2D01G532300.1 Wheat plastid 25.91 18.38
TraesCS1D01G076500.1 Wheat mitochondrion 22.1 18.37
TraesCS1A01G054700.2 Wheat mitochondrion 26.99 18.35
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 27.54 18.31
OQU80148 Sorghum mitochondrion 24.09 18.29
HORVU6Hr1G002890.6 Barley cytosol, plastid 26.27 18.24
TraesCS1D01G068400.1 Wheat mitochondrion 27.17 18.23
TraesCS1D01G069100.1 Wheat mitochondrion 21.2 18.2
TraesCS1D01G056200.1 Wheat mitochondrion 27.17 18.18
Zm00001d007548_P001 Maize plastid 26.81 18.18
Zm00001d007559_P001 Maize plastid 26.81 18.12
Zm00001d007531_P001 Maize plastid 26.63 18.06
Zm00001d007555_P001 Maize plastid 26.63 18.06
TraesCS1B01G071600.1 Wheat mitochondrion 27.54 17.92
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.54 17.92
HORVU0Hr1G031920.1 Barley plastid 27.72 17.79
Bra016758.1-P Field mustard plastid 37.32 17.77
KXG19780 Sorghum cytosol 19.02 17.77
KXG28799 Sorghum plastid 24.46 17.76
Os10t0497432-01 Rice mitochondrion 8.51 17.67
HORVU1Hr1G014040.1 Barley mitochondrion 26.63 17.65
TraesCS2A01G530600.1 Wheat cytosol 24.46 17.65
TraesCS1B01G039200.1 Wheat mitochondrion 25.0 17.6
HORVU6Hr1G076780.7 Barley mitochondrion 26.27 17.6
HORVU1Hr1G010970.1 Barley mitochondrion 26.27 17.55
HORVU1Hr1G004750.6 Barley plastid 25.36 17.54
TraesCS2D01G532600.1 Wheat plastid 24.64 17.53
TraesCS6A01G311600.1 Wheat mitochondrion 26.45 17.46
TraesCS1A01G073600.1 Wheat mitochondrion 12.32 17.35
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 22.46 17.29
TraesCS2B01G560700.1 Wheat plastid 24.09 17.25
TraesCS1B01G092500.1 Wheat mitochondrion 24.46 17.24
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 23.91 17.23
TraesCS1B01G072900.2 Wheat mitochondrion 27.17 17.18
Os08t0110200-01 Rice mitochondrion 24.64 17.04
HORVU1Hr1G010890.5 Barley cytosol 27.36 16.82
TraesCS1B01G084800.1 Wheat cytosol 14.13 16.81
HORVU1Hr1G013810.1 Barley plastid 25.54 16.81
HORVU1Hr1G011160.2 Barley cytosol, plastid 26.99 16.65
HORVU1Hr1G011150.1 Barley cytosol, plastid 26.63 16.65
TraesCS1A01G055800.1 Wheat mitochondrion 23.01 16.47
TraesCS1A01G073700.1 Wheat cytosol 11.41 16.36
HORVU1Hr1G014060.1 Barley plastid 26.27 16.29
TraesCS1D01G076900.1 Wheat plastid 19.38 16.29
HORVU1Hr1G011300.3 Barley plastid 26.81 16.09
TraesCS1D01G068700.1 Wheat cytosol 12.68 15.95
Os04t0351333-00 Rice cytosol 24.64 15.47
CDY31277 Canola plastid 26.63 15.33
Zm00001d009735_P001 Maize cytosol 26.63 15.11
TraesCS1D01G076700.1 Wheat cytosol 8.88 14.67
HORVU1Hr1G011400.44 Barley plastid 16.3 14.61
TraesCS1A01G056000.1 Wheat cytosol 10.51 14.43
TraesCS1D01G058500.1 Wheat plastid 14.86 14.39
OQU82834 Sorghum cytosol 25.0 14.33
TraesCS1D01G076400.1 Wheat cytosol 9.42 14.33
OQU82833 Sorghum cytosol 11.59 14.29
CDY34680 Canola cytosol 22.1 13.38
TraesCS6B01G341800.2 Wheat cytosol 9.6 13.28
TraesCS1D01G067600.1 Wheat cytosol 8.7 13.15
TraesCS1A01G055600.1 Wheat cytosol 7.61 12.92
TraesCS1D01G057700.1 Wheat cytosol 7.61 12.92
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.7 12.85
TraesCS1A01G067800.1 Wheat cytosol 8.7 12.83
TraesCS1D01G033000.1 Wheat cytosol 9.24 12.62
TraesCS1A01G055500.1 Wheat mitochondrion 4.89 12.44
TraesCS1A01G074000.1 Wheat mitochondrion 6.34 12.37
TraesCS1A01G066600.1 Wheat mitochondrion 5.8 12.17
TraesCS1B01G038600.1 Wheat cytosol 7.97 12.12
TraesCS1D01G056600.1 Wheat mitochondrion 4.35 11.88
TraesCS1B01G038300.1 Wheat plastid 11.41 11.54
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 4.71 11.4
OQU88581 Sorghum cytosol 22.1 11.22
TraesCS2D01G532200.1 Wheat cytosol 5.43 10.24
CDY21063 Canola plastid 0.91 0.91
Protein Annotations
EnsemblPlants:PGSC0003DMT400025074EnsemblPlantsGene:PGSC0003DMG400009683Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF3
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400009683SUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI0002953122UniProt:M1AKY7MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009683]
Coordinates
chr6:-:6439948..6447935
Molecular Weight (calculated)
62690.5 Da
IEP (calculated)
7.955
GRAVY (calculated)
-0.004
Length
552 amino acids
Sequence
(BLAST)
001: MDKFDFGVNI NCLDDAVILF KQMVTMKRLP SLVDFSKLFK TMINMKHYSA VLSLFREMQK LGIPIDGVIL NIVINSYCLM HRVDCAFSVL PIYLKNGIPF
101: NVVTFNTLLR GIFAENKVKD AVELFKKLVR EKICEPDEVM YATVMNGLSK RGHTEKTLSL LRLMEQGNTK PNIINYNIII DALCKDGNLD AAIDLMNEMK
201: QKDIPPNIVT YNSIIDGMCK LGEWEKCKTL FSEMVNLNIY PNVRTFNILT DGLCKEGKVE DAKEVMGYMI EKGIEPDIIT YNAIMYGYCL SGQLDGARKL
301: FDFMINKCIE PNIVSYNILI NGYCKKKKLA KAMQLFCEIS QKGPKPTTFI YNTILQGLFD VGRIGSAKNI YAEMLSARCI PDLYTHGTLL NGYFKYGLVE
401: EAISLFNKLE KQGENTDIEF YNVVINGLCK NGKLDKARAL FEKLSSMGLL PNVRTYTTMI TGFCLQGLVD EAKDMLRKME GNNCFPDNVT YNVMVQGFLR
501: CSRISEMTTF TKEMTGRGFS FDASTTELLV NIIMENPFVL DMIPELHLKN KK
Best Arabidopsis Sequence Match ( AT1G62930.1 )
(BLAST)
001: MTSCVHLGIV ASQSKKMSLA KRFAQLRKAS PLFSLRGVYF SAASYDYREK LSRNVLLDLK LDDAVDLFGE MVQSRPLPSI VEFNKLLSAI AKMNKFDLVI
101: SLGERMQNLR ISYDLYSYNI LINCFCRRSQ LPLALAVLGK MMKLGYEPDI VTLSSLLNGY CHGKRISEAV ALVDQMFVME YQPNTVTFNT LIHGLFLHNK
201: ASEAVALIDR MVARGCQPDL FTYGTVVNGL CKRGDIDLAL SLLKKMEKGK IEADVVIYTT IIDALCNYKN VNDALNLFTE MDNKGIRPNV VTYNSLIRCL
301: CNYGRWSDAS RLLSDMIERK INPNVVTFSA LIDAFVKEGK LVEAEKLYDE MIKRSIDPDI FTYSSLINGF CMHDRLDEAK HMFELMISKD CFPNVVTYNT
401: LIKGFCKAKR VEEGMELFRE MSQRGLVGNT VTYNTLIQGL FQAGDCDMAQ KIFKKMVSDG VPPDIITYSI LLDGLCKYGK LEKALVVFEY LQKSKMEPDI
501: YTYNIMIEGM CKAGKVEDGW DLFCSLSLKG VKPNVIIYTT MISGFCRKGL KEEADALFRE MKEDGTLPNS GTYNTLIRAR LRDGDKAASA ELIKEMRSCG
601: FVGDASTISM VINMLHDGRL EKSYLEMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g62930, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ14]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.