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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 6
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46912 Canola mitochondrion 91.97 97.37
Bra027029.1-P Field mustard mitochondrion 41.68 89.71
Bra036651.1-P Field mustard mitochondrion 78.97 77.2
AT1G62680.2 Thale cress plastid 72.08 68.8
Bra036649.1-P Field mustard cytosol 43.59 58.31
Bra027636.1-P Field mustard cytosol 33.46 54.01
Bra025516.1-P Field mustard cytosol, mitochondrion 49.14 53.88
Bra006187.1-P Field mustard plastid 29.45 52.92
Bra021192.1-P Field mustard plastid 47.61 49.4
Bra027726.1-P Field mustard mitochondrion 42.64 47.35
Bra027658.1-P Field mustard cytosol, mitochondrion 44.93 43.28
Bra026882.1-P Field mustard cytosol 43.79 42.88
Bra026884.1-P Field mustard cytosol 36.33 41.39
Bra026401.1-P Field mustard plastid 42.26 41.31
Bra016762.1-P Field mustard mitochondrion 47.8 41.19
Bra028267.1-P Field mustard mitochondrion 48.76 40.73
Bra026971.1-P Field mustard mitochondrion 48.37 40.22
Bra026958.1-P Field mustard mitochondrion 47.99 39.4
Bra026957.1-P Field mustard mitochondrion 45.12 39.14
Bra026836.1-P Field mustard cytosol, mitochondrion 36.14 38.49
Bra031731.1-P Field mustard mitochondrion 37.28 38.39
Bra026954.1-P Field mustard mitochondrion 47.42 38.15
VIT_12s0028g02320.t01 Wine grape mitochondrion 34.42 37.74
VIT_14s0081g00120.t01 Wine grape plastid 37.67 33.79
Solyc06g007280.2.1 Tomato cytosol 16.44 33.73
VIT_14s0081g00270.t01 Wine grape plastid 36.71 33.1
PGSC0003DMT400052977 Potato cytosol 24.28 32.65
KRH70370 Soybean cytosol 33.65 32.35
Solyc06g005220.2.1 Tomato cytosol 25.05 32.27
VIT_14s0030g02280.t01 Wine grape plastid 34.23 31.91
PGSC0003DMT400025074 Potato cytosol 33.27 31.52
KRH49698 Soybean cytosol 34.03 31.23
Solyc06g007810.1.1 Tomato cytosol 15.87 30.97
KRH09256 Soybean mitochondrion 33.08 30.95
KRH42744 Soybean mitochondrion 36.14 30.93
VIT_14s0081g00110.t01 Wine grape cytosol 28.87 30.75
PGSC0003DMT400008757 Potato cytosol 29.25 30.72
KRH58843 Soybean nucleus 35.76 30.61
Solyc06g007300.1.1 Tomato extracellular 34.42 30.41
Solyc06g007740.1.1 Tomato cytosol 33.65 29.83
PGSC0003DMT400008759 Potato cytosol 18.16 29.78
PGSC0003DMT400025087 Potato endoplasmic reticulum 28.11 29.7
KRH38755 Soybean mitochondrion 33.65 29.63
PGSC0003DMT400052971 Potato mitochondrion 33.46 29.51
KRH75045 Soybean mitochondrion 33.65 29.48
VIT_14s0081g00280.t01 Wine grape mitochondrion 35.37 28.95
KRH75048 Soybean mitochondrion 33.46 28.78
PGSC0003DMT400025067 Potato cytosol 26.0 28.57
PGSC0003DMT400053556 Potato mitochondrion 25.05 28.54
PGSC0003DMT400015293 Potato mitochondrion 33.27 28.52
PGSC0003DMT400015298 Potato mitochondrion 33.27 28.52
PGSC0003DMT400008760 Potato mitochondrion 31.74 28.33
KRH75063 Soybean mitochondrion, plastid 32.7 28.31
PGSC0003DMT400053185 Potato mitochondrion 31.93 28.31
PGSC0003DMT400056665 Potato mitochondrion 31.74 28.18
Solyc04g080120.1.1 Tomato extracellular 32.7 27.94
PGSC0003DMT400056663 Potato plastid 31.36 27.89
PGSC0003DMT400053182 Potato cytosol 30.98 27.05
VIT_14s0030g02260.t01 Wine grape cytosol 22.18 26.19
HORVU1Hr1G011250.1 Barley cytosol 14.72 26.1
TraesCS2B01G126900.1 Wheat cytosol 17.59 24.08
Os10t0495100-01 Rice cytosol, mitochondrion 21.03 23.86
Zm00001d018982_P001 Maize mitochondrion 15.87 23.71
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 17.02 23.55
KXG34536 Sorghum mitochondrion 25.43 23.25
Os08t0248400-01 Rice mitochondrion 19.5 23.18
TraesCS6D01G083300.1 Wheat mitochondrion 19.69 23.09
OQU82832 Sorghum cytosol 12.62 23.08
Os10t0501700-00 Rice cytosol 19.89 22.91
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 13.0 22.9
HORVU1Hr1G018190.2 Barley cytosol 12.43 22.81
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 21.99 22.5
Os10t0497366-00 Rice mitochondrion 17.21 22.44
TraesCS6B01G127200.1 Wheat cytosol 14.72 22.38
HORVU6Hr1G017870.2 Barley mitochondrion 12.81 22.33
TraesCS1A01G067700.1 Wheat extracellular 14.34 22.26
TraesCS6D01G083100.1 Wheat cytosol 20.84 22.24
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 20.46 22.11
Bra027656.1-P Field mustard cytosol 39.77 22.1
TraesCSU01G089700.1 Wheat mitochondrion 20.27 21.99
Os10t0499500-01 Rice mitochondrion 21.22 21.94
TraesCS6D01G083400.1 Wheat mitochondrion 20.65 21.91
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 20.84 21.67
TraesCS6B01G127500.1 Wheat cytosol 20.27 21.63
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 19.89 21.62
EER95949 Sorghum mitochondrion 27.34 21.57
Bra016758.1-P Field mustard plastid 47.61 21.48
TraesCS1D01G068600.1 Wheat plastid 13.96 21.47
TraesCS6A01G015000.1 Wheat mitochondrion 16.83 21.2
TraesCS1D01G058000.1 Wheat cytosol 16.44 21.18
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 20.08 20.79
TraesCS7D01G231400.1 Wheat cytosol, plastid 15.87 20.6
TraesCSU01G090200.1 Wheat cytosol 17.4 20.59
OQU88594 Sorghum cytosol 20.46 20.5
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 12.62 20.31
Os08t0107800-01 Rice mitochondrion 23.9 20.03
TraesCSU01G089800.1 Wheat mitochondrion 13.38 19.94
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 16.44 19.86
TraesCS7B01G469500.1 Wheat cytosol 21.22 19.75
TraesCS6A01G083000.1 Wheat cytosol 17.21 19.74
TraesCS1B01G038200.1 Wheat mitochondrion 23.71 19.59
KXG27690 Sorghum cytosol, plastid 27.15 19.43
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 13.96 19.26
Os08t0107700-01 Rice cytosol, mitochondrion 13.77 19.25
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 17.59 19.17
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 26.0 19.02
TraesCS6D01G076500.1 Wheat plastid 16.44 18.98
TraesCS1A01G073800.1 Wheat mitochondrion 12.05 18.92
TraesCS6D01G017700.1 Wheat plastid 19.31 18.91
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 15.87 18.91
TraesCS1D01G056600.1 Wheat mitochondrion 7.27 18.81
Os10t0495200-01 Rice mitochondrion 28.11 18.8
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 12.24 18.71
OQU80148 Sorghum mitochondrion 26.0 18.71
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 25.43 18.63
TraesCS6B01G114300.1 Wheat cytosol 13.77 18.51
HORVU6Hr1G014310.1 Barley mitochondrion 24.28 18.49
TraesCS1B01G315500.1 Wheat mitochondrion 11.28 18.38
OQU82856 Sorghum cytosol 26.39 18.35
TraesCS6B01G021600.1 Wheat mitochondrion 25.05 18.3
TraesCS1B01G072700.1 Wheat cytosol 17.78 18.24
TraesCS6D01G047700.1 Wheat mitochondrion 24.09 18.23
EES09203 Sorghum cytosol 27.72 18.17
TraesCS1B01G072300.1 Wheat plastid 19.69 18.13
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 24.67 18.04
TraesCS2A01G531000.1 Wheat golgi 23.33 17.97
Os10t0497300-01 Rice mitochondrion 27.15 17.88
TraesCS1B01G086000.1 Wheat plastid 23.14 17.64
Zm00001d009733_P001 Maize cytosol 26.58 17.48
TraesCS1D01G069100.1 Wheat mitochondrion 21.41 17.42
TraesCS1A01G031700.1 Wheat plastid 24.67 17.41
TraesCS1B01G092600.1 Wheat plastid 17.21 17.41
TraesCS2A01G530600.1 Wheat cytosol 25.43 17.39
TraesCS1A01G031600.1 Wheat cytosol 21.99 17.37
HORVU0Hr1G035310.1 Barley cytosol 19.31 17.35
TraesCS6D01G290900.1 Wheat mitochondrion 24.28 17.33
OQU82823 Sorghum cytosol 26.39 17.31
OQU82827 Sorghum cytosol 26.39 17.31
TraesCS1D01G058400.1 Wheat cytosol 17.02 17.28
TraesCS1B01G072400.1 Wheat cytosol 22.94 17.27
TraesCS2D01G532500.1 Wheat plastid 22.37 17.21
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 23.52 17.2
TraesCS1B01G073200.1 Wheat cytosol 9.94 17.16
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.81 17.15
TraesCS2B01G560700.1 Wheat plastid 25.24 17.12
TraesCS1D01G057800.1 Wheat mitochondrion 11.85 17.08
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 22.75 17.02
TraesCS6D01G017800.1 Wheat cytosol 17.4 16.95
TraesCS2D01G532100.1 Wheat mitochondrion 22.37 16.91
TraesCS2A01G526200.1 Wheat golgi 21.99 16.89
TraesCS2A01G531100.1 Wheat cytosol 18.36 16.87
EES07882 Sorghum cytosol 25.05 16.86
TraesCS2D01G532400.1 Wheat cytosol 19.69 16.86
TraesCS1A01G067600.1 Wheat mitochondrion 26.2 16.85
TraesCS1D01G068900.1 Wheat mitochondrion 26.2 16.85
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.43 16.79
TraesCS1D01G068500.1 Wheat mitochondrion 26.0 16.75
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 21.22 16.72
TraesCS2D01G532300.1 Wheat plastid 24.86 16.71
TraesCS6A01G014600.1 Wheat cytosol 12.62 16.71
OQU82831 Sorghum cytosol 19.5 16.64
TraesCS1B01G038400.1 Wheat cytosol 19.31 16.61
TraesCS1A01G055500.1 Wheat mitochondrion 6.88 16.59
HORVU1Hr1G004750.6 Barley plastid 25.24 16.54
TraesCS2D01G532600.1 Wheat plastid 24.47 16.49
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 20.08 16.43
KXG19780 Sorghum cytosol 18.55 16.41
Zm00001d007534_P001 Maize plastid 24.28 16.34
TraesCS2B01G560300.1 Wheat cytosol 17.78 16.34
HORVU1Hr1G011150.1 Barley cytosol, plastid 27.53 16.31
TraesCS1B01G039700.1 Wheat cytosol 18.93 16.28
KXG35774 Sorghum cytosol, mitochondrion 14.72 16.28
TraesCS2D01G533000.1 Wheat cytosol, extracellular 20.46 16.24
TraesCS2B01G559900.1 Wheat cytosol 16.83 16.24
HORVU1Hr1G010970.1 Barley mitochondrion 25.62 16.22
HORVU1Hr1G014040.1 Barley mitochondrion 25.81 16.21
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 7.84 16.21
TraesCS1B01G038500.1 Wheat mitochondrion 24.47 16.2
HORVU0Hr1G031920.1 Barley plastid 26.58 16.16
TraesCS1A01G054700.2 Wheat mitochondrion 25.05 16.13
TraesCS1B01G085900.1 Wheat mitochondrion 25.05 16.09
KXG28799 Sorghum plastid 23.33 16.05
Zm00001d007548_P001 Maize plastid 24.86 15.97
TraesCS1B01G039100.1 Wheat mitochondrion 23.9 15.96
TraesCS1D01G068800.1 Wheat plastid 24.86 15.93
Zm00001d007559_P001 Maize plastid 24.86 15.91
HORVU6Hr1G002890.6 Barley cytosol, plastid 24.09 15.85
Os10t0497432-01 Rice mitochondrion 8.03 15.79
HORVU6Hr1G076780.7 Barley mitochondrion 24.86 15.78
TraesCS1A01G054500.1 Wheat mitochondrion 23.52 15.77
Os04t0349600-01 Rice plastid 11.66 15.76
TraesCS1D01G056200.1 Wheat mitochondrion 24.86 15.76
TraesCS1B01G085400.1 Wheat cytosol 19.31 15.76
Zm00001d007555_P001 Maize plastid 24.47 15.72
HORVU1Hr1G010890.5 Barley cytosol 26.96 15.7
TraesCS1D01G055300.1 Wheat cytosol 18.55 15.7
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 20.84 15.64
TraesCS1A01G067400.1 Wheat mitochondrion 24.67 15.64
Zm00001d007531_P001 Maize plastid 24.28 15.6
HORVU1Hr1G011160.2 Barley cytosol, plastid 26.58 15.53
TraesCS1B01G085300.1 Wheat mitochondrion 23.52 15.53
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 23.14 15.51
TraesCS1B01G072900.2 Wheat mitochondrion 25.81 15.46
HORVU1Hr1G011300.3 Barley plastid 27.15 15.43
TraesCS1D01G068400.1 Wheat mitochondrion 24.28 15.43
TraesCS1B01G075300.1 Wheat cytosol 17.59 15.41
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 6.69 15.35
TraesCS1A01G074000.1 Wheat mitochondrion 8.22 15.19
TraesCS6A01G311600.1 Wheat mitochondrion 24.28 15.19
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 24.09 15.18
TraesCS1B01G039200.1 Wheat mitochondrion 22.75 15.18
TraesCS1D01G076900.1 Wheat plastid 18.93 15.07
TraesCS1D01G076500.1 Wheat mitochondrion 19.12 15.06
OQU82836 Sorghum cytosol 17.59 15.03
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 21.99 15.01
TraesCS1B01G073100.1 Wheat cytosol 17.21 14.85
TraesCS1A01G067000.1 Wheat mitochondrion 20.27 14.8
TraesCS1D01G056700.1 Wheat cytosol 17.02 14.66
HORVU1Hr1G014060.1 Barley plastid 24.86 14.61
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 18.74 14.56
Os08t0110200-01 Rice mitochondrion 22.18 14.54
TraesCS1A01G055800.1 Wheat mitochondrion 21.41 14.53
TraesCS1B01G071600.1 Wheat mitochondrion 23.52 14.5
TraesCS1A01G054800.1 Wheat cytosol 16.06 14.43
TraesCS1B01G092500.1 Wheat mitochondrion 21.41 14.3
HORVU1Hr1G013810.1 Barley plastid 22.94 14.3
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 19.5 14.23
TraesCS1A01G057300.1 Wheat cytosol 19.5 14.21
TraesCS1D01G068700.1 Wheat cytosol 11.85 14.12
Zm00001d009735_P001 Maize cytosol 26.2 14.08
OQU82833 Sorghum cytosol 11.47 13.39
TraesCS1B01G084800.1 Wheat cytosol 11.85 13.36
TraesCS1A01G073600.1 Wheat mitochondrion 9.75 13.01
OQU82834 Sorghum cytosol 23.9 12.98
TraesCS1A01G066600.1 Wheat mitochondrion 6.5 12.93
Os04t0351333-00 Rice cytosol 21.61 12.86
HORVU1Hr1G011400.44 Barley plastid 14.15 12.01
TraesCS1A01G073700.1 Wheat cytosol 8.8 11.95
TraesCS1D01G058500.1 Wheat plastid 13.0 11.93
TraesCS6B01G129100.1 Wheat cytosol, plastid 6.5 11.81
TraesCS1D01G033000.1 Wheat cytosol 8.8 11.39
TraesCS1B01G038300.1 Wheat plastid 11.66 11.17
TraesCS1A01G056000.1 Wheat cytosol 8.41 10.95
TraesCS6B01G341800.2 Wheat cytosol 8.22 10.78
TraesCS1D01G076700.1 Wheat cytosol 6.5 10.18
TraesCS1A01G067800.1 Wheat cytosol 7.27 10.16
TraesCS1D01G067600.1 Wheat cytosol 7.07 10.14
TraesCS1D01G076400.1 Wheat cytosol 6.88 9.92
TraesCS1B01G038600.1 Wheat cytosol 6.5 9.37
OQU88581 Sorghum cytosol 19.12 9.2
TraesCS2D01G532200.1 Wheat cytosol 4.78 8.53
TraesCS1A01G055600.1 Wheat cytosol 4.59 7.38
TraesCS1D01G057700.1 Wheat cytosol 4.59 7.38
Protein Annotations
EnsemblPlants:Bra027026.1EnsemblPlants:Bra027026.1-PEnsemblPlantsGene:Bra027026Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488
GO:GO:0005515InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015
PANTHER:PTHR24015:SF1649PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segSUPFAM:SSF48452
TIGRFAMs:TIGR00756TMHMM:TMhelixUniParc:UPI0002542509UniProt:M4EE16MapMan:35.1:
Description
AT1G62680 (E=1e-197) | LOCATED IN: chloroplast; EXPRESSED IN: shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1); Has 26421 Blast hits to 6237 proteins in 192 species: Archae - 5; Bacteria - 22; Metazoa - 845; Fungi - 755; Plants - 23373; Viruses - 0; Other Eukaryotes - 1421 (source: NCBI BLink).
Coordinates
chrA09:+:7722673..7724244
Molecular Weight (calculated)
58479.4 Da
IEP (calculated)
7.660
GRAVY (calculated)
0.021
Length
523 amino acids
Sequence
(BLAST)
001: MQRWLATTAK RLLHRCNNLP QKAKPRTHLP SSSFYHRWAR ASSTAIKRNP NDAIELFDKM VNSRPYPSII SFTKLLTSLV KLKRYDVVIS LSKKMETLGI
101: RNDLYTFNVL INCFCSCYQV SLALSLLGKM LKLGFEPDKV TLGSLVNGFC LKNRVSEAVS FVKKMVEFGY GVDIVAYNTI IDSMCKSKRA DEALSFFNGL
201: EREGVSVRPN VVTYTSLVKG LCNVGRWSDA ARLLSDMIKR EISPNVVTYS ALVDAFVKNG KVLEAKELYE EMIRMSIEPD IVTYSSLING LCMQDRVDEA
301: SEMFGLMVRR GCFPDVVSYN TLINGFCKAK RVEDGMRLFR EMSQRGLVSS TVTYNTLIQG FFEAGDVDMA QEVFSQMDSP DIWTYNIMLG GLCDNGEVEK
401: ALVMFEDLQK SEMELDIVTY TTIIHGMCKA GKVEEAWGLF CSLSVEGVKP DVVAYSTMLS GLCSKGLHCE IDALYLKMQG DGLVLNGRKL CLRDGDITVS
501: AEVIKELLTR ATSEGCEKAV SLL
Best Arabidopsis Sequence Match ( AT1G62680.2 )
(BLAST)
001: MQRSIAMTAK RFLHRNLLEN GKPRTASSPS FSHCSSCRCW VRASSSVSGG DLRERLSKTR LRDIKLNDAI DLFSDMVKSR PFPSIVDFNR LLSAIVKLKK
101: YDVVISLGKK MEVLGIRNDL YTFNIVINCF CCCFQVSLAL SILGKMLKLG YEPDRVTIGS LVNGFCRRNR VSDAVSLVDK MVEIGYKPDI VAYNAIIDSL
201: CKTKRVNDAF DFFKEIERKG IRPNVVTYTA LVNGLCNSSR WSDAARLLSD MIKKKITPNV ITYSALLDAF VKNGKVLEAK ELFEEMVRMS IDPDIVTYSS
301: LINGLCLHDR IDEANQMFDL MVSKGCLADV VSYNTLINGF CKAKRVEDGM KLFREMSQRG LVSNTVTYNT LIQGFFQAGD VDKAQEFFSQ MDFFGISPDI
401: WTYNILLGGL CDNGELEKAL VIFEDMQKRE MDLDIVTYTT VIRGMCKTGK VEEAWSLFCS LSLKGLKPDI VTYTTMMSGL CTKGLLHEVE ALYTKMKQEG
501: LMKNDCTLSD GDITLSAELI KKMLSCGYAP SLLKDIKSGV CKKALSLL
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g62680, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q3ECK2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.