Factsheet for HORVU6Hr1G014310.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G114300.1	Wheat	cytosol	51.24	90.49
TraesCS6A01G083000.1	Wheat	cytosol	59.68	89.91
TraesCS6D01G076500.1	Wheat	plastid	53.28	80.79
HORVU1Hr1G018190.2	Barley	cytosol	29.99	72.28
HORVU6Hr1G002890.6	Barley	cytosol, plastid	64.77	55.97
Os10t0497366-00	Rice	mitochondrion	31.88	54.61
Os10t0495100-01	Rice	cytosol, mitochondrion	36.39	54.23
Os10t0497432-01	Rice	mitochondrion	20.67	53.38
Os08t0248400-01	Rice	mitochondrion	33.77	52.73
Zm00001d018982_P001	Maize	mitochondrion	25.91	50.86
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	21.98	50.84
OQU88594	Sorghum	cytosol	38.57	50.77
Os10t0501700-00	Rice	cytosol	31.88	48.24
Os10t0499500-01	Rice	mitochondrion	35.37	48.02
Os08t0107700-01	Rice	cytosol, mitochondrion	26.06	47.86
EER95949	Sorghum	mitochondrion	46.0	47.66
HORVU1Hr1G011250.1	Barley	cytosol	20.23	47.12
HORVU6Hr1G017870.2	Barley	mitochondrion	19.94	45.67
Os08t0107800-01	Rice	mitochondrion	41.05	45.19
Zm00001d009733_P001	Maize	cytosol	51.24	44.28
Os10t0495200-01	Rice	mitochondrion	50.36	44.25
Os10t0497300-01	Rice	mitochondrion	50.95	44.08
KXG34536	Sorghum	mitochondrion	36.68	44.06
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	27.8	39.79
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	35.66	38.34
Os08t0110200-01	Rice	mitochondrion	43.38	37.34
HORVU0Hr1G035310.1	Barley	cytosol	31.15	36.77
Zm00001d009735_P001	Maize	cytosol	51.24	36.18
HORVU1Hr1G010970.1	Barley	mitochondrion	43.38	36.08
HORVU6Hr1G076780.7	Barley	mitochondrion	42.21	35.19
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	35.81	35.19
HORVU0Hr1G031920.1	Barley	plastid	43.81	35.0
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	42.07	34.82
HORVU1Hr1G013810.1	Barley	plastid	42.07	34.45
HORVU1Hr1G014040.1	Barley	mitochondrion	41.48	34.21
HORVU1Hr1G004750.6	Barley	plastid	39.59	34.09
Solyc06g007280.2.1	Tomato	cytosol	12.52	33.73
HORVU1Hr1G010890.5	Barley	cytosol	43.67	33.41
HORVU1Hr1G011160.2	Barley	cytosol, plastid	42.94	32.96
HORVU1Hr1G011150.1	Barley	cytosol, plastid	42.36	32.96
HORVU1Hr1G011300.3	Barley	plastid	42.94	32.07
HORVU1Hr1G014060.1	Barley	plastid	41.19	31.8
VIT_12s0028g02320.t01	Wine grape	mitochondrion	20.82	29.98
Solyc06g005220.2.1	Tomato	cytosol	17.03	28.82
KRH40513	Soybean	plastid	14.7	28.77
KRH39004	Soybean	cytosol	20.82	28.77
KRH39054	Soybean	cytosol	20.82	28.77
KRH39057	Soybean	cytosol	20.67	28.57
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	20.82	28.32
KRH39072	Soybean	cytosol	20.38	28.23
KRH39074	Soybean	cytosol	20.23	27.97
HORVU1Hr1G011400.44	Barley	plastid	25.04	27.92
KRH39112	Soybean	cytosol	20.09	27.77
Bra036649.1-P	Field mustard	cytosol	15.72	27.62
AT1G63330.2	Thale cress	cytosol	22.42	27.55
PGSC0003DMT400008757	Potato	cytosol	19.8	27.31
PGSC0003DMT400052977	Potato	cytosol	15.43	27.25
KRH41817	Soybean	mitochondrion	21.98	27.21
PGSC0003DMT400025074	Potato	cytosol	21.69	26.99
AT5G16640.1	Thale cress	mitochondrion	19.8	26.98
Solyc06g007740.1.1	Tomato	cytosol	23.14	26.95
Bra027636.1-P	Field mustard	cytosol	12.66	26.85
KRH31646	Soybean	cytosol	20.23	26.83
KRH08636	Soybean	cytosol	20.38	26.82
AT1G62914.1	Thale cress	mitochondrion	20.52	26.7
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	20.38	26.67
KRH08628	Soybean	plastid	21.4	26.63
KRH39050	Soybean	mitochondrion	20.52	26.5
KRH09084	Soybean	plastid	19.51	26.22
PGSC0003DMT400025087	Potato	endoplasmic reticulum	18.78	26.06
AT1G62670.1	Thale cress	mitochondrion	23.87	26.03
Solyc06g007300.1.1	Tomato	extracellular	22.42	26.01
AT1G63070.1	Thale cress	mitochondrion	22.27	25.93
Bra027029.1-P	Field mustard	mitochondrion	9.17	25.93
AT1G62930.1	Thale cress	plastid	23.73	25.91
KRH09154	Soybean	mitochondrion	20.96	25.9
KRH48615	Soybean	mitochondrion	20.52	25.87
KRH08607	Soybean	cytosol	21.11	25.85
Bra026882.1-P	Field mustard	cytosol	20.09	25.84
Bra026884.1-P	Field mustard	cytosol	17.18	25.71
KRH08639	Soybean	mitochondrion, plastid	21.11	25.66
AT1G63400.1	Thale cress	cytosol, plastid	21.54	25.65
PGSC0003DMT400025067	Potato	cytosol	17.76	25.63
KRH17148	Soybean	mitochondrion	20.23	25.5
KRH08671	Soybean	cytosol, mitochondrion	20.52	25.5
PGSC0003DMT400053185	Potato	mitochondrion	21.83	25.42
AT1G63080.3	Thale cress	mitochondrion	22.71	25.41
AT1G63130.1	Thale cress	mitochondrion	23.29	25.4
KRH08277	Soybean	plastid	20.96	25.4
AT1G62910.1	Thale cress	mitochondrion	23.29	25.32
KRH40400	Soybean	plastid	21.25	25.3
PGSC0003DMT400056665	Potato	mitochondrion	21.69	25.3
AT3G16710.1	Thale cress	mitochondrion	18.63	25.25
Bra036651.1-P	Field mustard	mitochondrion	19.65	25.23
VIT_14s0081g00120.t01	Wine grape	plastid	21.4	25.21
Bra026958.1-P	Field mustard	mitochondrion	23.29	25.12
PGSC0003DMT400008760	Potato	mitochondrion	21.4	25.09
PGSC0003DMT400008759	Potato	cytosol	11.64	25.08
VIT_14s0081g00110.t01	Wine grape	cytosol	17.9	25.05
KRH39066	Soybean	cytosol	20.23	25.05
PGSC0003DMT400056663	Potato	plastid	21.4	25.0
AT1G62590.1	Thale cress	mitochondrion	23.0	24.92
PGSC0003DMT400015293	Potato	mitochondrion	22.13	24.92
PGSC0003DMT400015298	Potato	mitochondrion	22.13	24.92
KRH09121	Soybean	mitochondrion	19.36	24.91
Bra027658.1-P	Field mustard	cytosol, mitochondrion	19.65	24.86
Bra031731.1-P	Field mustard	mitochondrion	18.34	24.8
Bra021192.1-P	Field mustard	plastid	18.2	24.8
Bra026971.1-P	Field mustard	mitochondrion	22.71	24.8
VIT_14s0081g00280.t01	Wine grape	mitochondrion	23.0	24.73
AT3G22470.1	Thale cress	cytosol, mitochondrion	22.27	24.72
AT1G64580.1	Thale cress	mitochondrion	18.78	24.67
VIT_14s0081g00270.t01	Wine grape	plastid	20.82	24.66
AT1G63150.1	Thale cress	mitochondrion	22.56	24.64
AT1G12620.1	Thale cress	cytosol, mitochondrion	22.27	24.64
Solyc06g007810.1.1	Tomato	cytosol	9.61	24.63
AT1G62720.1	Thale cress	mitochondrion	17.32	24.54
KRH09082	Soybean	cytosol	14.56	24.51
Solyc04g080120.1.1	Tomato	extracellular	21.83	24.51
KRH08625	Soybean	plastid	20.52	24.48
AT1G06580.1	Thale cress	mitochondrion	17.76	24.4
Bra025516.1-P	Field mustard	cytosol, mitochondrion	16.89	24.32
PGSC0003DMT400052971	Potato	mitochondrion	20.96	24.28
Bra027026.1-P	Field mustard	mitochondrion	18.49	24.28
KRH25652	Soybean	cytosol, golgi	19.07	24.26
VIT_14s0030g02280.t01	Wine grape	plastid	19.8	24.24
AT1G64583.1	Thale cress	mitochondrion	18.05	24.22
AT1G62680.2	Thale cress	plastid	19.21	24.09
AT1G12300.1	Thale cress	mitochondrion	22.13	23.86
Bra006187.1-P	Field mustard	plastid	10.04	23.71
Bra028267.1-P	Field mustard	mitochondrion	21.25	23.32
PGSC0003DMT400053556	Potato	mitochondrion	15.57	23.31
Bra026954.1-P	Field mustard	mitochondrion	21.98	23.23
KRH09097	Soybean	plastid	19.65	23.16
PGSC0003DMT400053182	Potato	cytosol	20.09	23.04
AT5G41170.1	Thale cress	mitochondrion	17.61	22.96
KRH09095	Soybean	plastid	19.51	22.91
Bra016762.1-P	Field mustard	mitochondrion	20.23	22.9
Bra026957.1-P	Field mustard	mitochondrion	19.94	22.72
AT1G12775.1	Thale cress	cytosol, mitochondrion	21.25	22.67
AT4G26800.2	Thale cress	mitochondrion, plastid	16.89	22.57
Bra026836.1-P	Field mustard	cytosol, mitochondrion	15.72	22.0
AT1G12700.2	Thale cress	cytosol	19.65	21.84
KRH08599	Soybean	cytosol, plastid	20.96	21.52
OQU88581	Sorghum	cytosol	33.62	21.25
Bra027726.1-P	Field mustard	mitochondrion	14.41	21.02
Bra026401.1-P	Field mustard	plastid	16.3	20.93
CDX68679	Canola	cytosol	3.49	20.87
AT1G64100.2	Thale cress	cytosol	23.73	20.22
KRH09085	Soybean	mitochondrion	19.65	19.18
Bra027656.1-P	Field mustard	cytosol	25.33	18.49
VIT_14s0030g02260.t01	Wine grape	cytosol	11.5	17.83
KRH12873	Soybean	cytosol	18.05	17.82
KRH39064	Soybean	cytosol	21.69	15.38
Bra016758.1-P	Field mustard	plastid	21.4	12.68

Protein Annotations

EnsemblPlants:HORVU6Hr1G014310.1	EnsemblPlantsGene:HORVU6Hr1G014310	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR002885	InterPro:IPR011990	InterPro:Pentatricopeptide_repeat	InterPro:TPR-like_helical_dom_sf	PANTHER:PTHR24015	PANTHER:PTHR24015:SF302
PFAM:PF01535	PFAM:PF12854	PFAM:PF13041	PFscan:PS51375	TIGRFAMs:TIGR00756	UniParc:UPI000295F0AA
UniProt:M0VUF0	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:30412758..30417708

Molecular Weight (calculated)

77109.6 Da

IEP (calculated)

6.769

GRAVY (calculated)

0.106

Length

687 amino acids

Sequence
(BLAST)

001: MSRRIVRRVL ERNIEERYRA GAIGTEDALH LFDELLQDAG PSSVRAINCL LYVVGRDRPA LGVSLFNRVA RAKVPRSNIT YNILVGCCCH AGRLDLGFAA
101: MGNIIKLGFS AEAMVAFNHL LRAICAENKT SYAMDIALRR MPEFNCIPNV FSYSVLLKGL CVEKRSQEAL ELIHMMADAG GSCQPNVVSY STVVDGLLKE
201: GEVNKAYSLF CEMLHQGITP DVVTYSSIIS GMCKVQAMDK AEEVLQQMFD RGILPNVTTY NSLIHGYYSS GLCEEVVRIF KKMSGNGVQP DITTYNIQMD
301: YLCKSGRCEE ARAIFDSMAG KVQKPNVTSY SILLHGYVME RSFHDMHCLI KLMVENGIAP NHFVYNILIV AYAKEKMVDE VMHIFTKMRQ QGLNPKAANY
401: GTVINLLCSI GRMDDAMLQF NQMVTEELTP DIIVFNTLIS GFCSCGIWEK VHELLAEMLN RGIYPDNVFF NTIMDHLCKN GRVMESQDLA DLMIHMGVKP
501: GMHTYNTLMG GYFFIGKMDE VRKLLDHMVS IGMELDIVTY NTLIDGYFKN GMVDDALAVL SEMLDKKVEP CIINYNTVLH GLFHTGRTVA ANELYLRMID
601: SGVCVNIVTY NIILSGLCRN NRVDEALRMF QNLCSTNYQL EIRTYNIMVS ALLKVGRKEE ATGLLGGIWA KGFVPDAVTY RLMIQSF

Best Arabidopsis Sequence Match ( AT1G62670.1 )
(BLAST)

001: MRISFAIAST AKRFVHRSLV VRGNAATVSP SFSFFWRRAF SGKTSYDYRE KLSRNGLSEL KLDDAVALFG EMVKSRPFPS IIEFSKLLSA IAKMNKFDVV
101: ISLGEQMQNL GIPHNHYTYS ILINCFCRRS QLPLALAVLG KMMKLGYEPN IVTLSSLLNG YCHSKRISEA VALVDQMFVT GYQPNTVTFN TLIHGLFLHN
201: KASEAMALID RMVAKGCQPD LVTYGVVVNG LCKRGDTDLA FNLLNKMEQG KLEPGVLIYN TIIDGLCKYK HMDDALNLFK EMETKGIRPN VVTYSSLISC
301: LCNYGRWSDA SRLLSDMIER KINPDVFTFS ALIDAFVKEG KLVEAEKLYD EMVKRSIDPS IVTYSSLING FCMHDRLDEA KQMFEFMVSK HCFPDVVTYN
401: TLIKGFCKYK RVEEGMEVFR EMSQRGLVGN TVTYNILIQG LFQAGDCDMA QEIFKEMVSD GVPPNIMTYN TLLDGLCKNG KLEKAMVVFE YLQRSKMEPT
501: IYTYNIMIEG MCKAGKVEDG WDLFCNLSLK GVKPDVVAYN TMISGFCRKG SKEEADALFK EMKEDGTLPN SGCYNTLIRA RLRDGDREAS AELIKEMRSC
601: GFAGDASTIG LVTNMLHDGR LDKSFLDMLS

Arabidopsis Description

RPF2Pentatricopeptide repeat-containing protein At1g62670, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SXD1]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.