CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39004	Soybean	cytosol	50.15	97.79
KRH39054	Soybean	cytosol	49.85	97.18
KRH39072	Soybean	cytosol	48.19	94.15
KRH39074	Soybean	cytosol	48.19	93.96
KRH39057	Soybean	cytosol	47.47	92.56
KRH39112	Soybean	cytosol	44.99	87.73
KRH39066	Soybean	cytosol	49.43	86.31
KRH48615	Soybean	mitochondrion	42.41	75.41
KRH17148	Soybean	mitochondrion	38.7	68.81
KRH08636	Soybean	cytosol	35.6	66.09
KRH08628	Soybean	plastid	37.36	65.58
KRH08277	Soybean	plastid	38.29	65.43
KRH09154	Soybean	mitochondrion	37.05	64.57
KRH08671	Soybean	cytosol, mitochondrion	36.64	64.2
KRH08639	Soybean	mitochondrion, plastid	37.36	64.07
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	33.23	63.76
KRH40400	Soybean	plastid	37.87	63.6
KRH08607	Soybean	cytosol	36.22	62.57
KRH08625	Soybean	plastid	37.05	62.33
KRH09084	Soybean	plastid	32.51	61.64
KRH25652	Soybean	cytosol, golgi	33.02	59.26
KRH09121	Soybean	mitochondrion	31.17	56.55
KRH09095	Soybean	plastid	32.92	54.53
KRH09097	Soybean	plastid	32.61	54.2
KRH09082	Soybean	cytosol	22.39	53.19
KRH40513	Soybean	plastid	18.47	51.0
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	26.63	49.14
KRH08599	Soybean	cytosol, plastid	33.33	48.28
KRH41817	Soybean	mitochondrion	27.24	47.57
KRH09085	Soybean	mitochondrion	33.85	46.59
KRH39050	Soybean	mitochondrion	24.25	44.17
KRH31646	Soybean	cytosol	20.95	39.19
KRH70370	Soybean	cytosol	21.47	38.24
KRH49698	Soybean	cytosol	22.08	37.54
KRH38755	Soybean	mitochondrion	22.39	36.53
KRH58843	Soybean	nucleus	22.91	36.33
KRH42744	Soybean	mitochondrion	22.6	35.84
KRH09256	Soybean	mitochondrion	20.23	35.06
KRH75045	Soybean	mitochondrion	20.43	33.17
KRH75063	Soybean	mitochondrion, plastid	20.23	32.45
HORVU1Hr1G011250.1	Barley	cytosol	9.8	32.2
KRH75048	Soybean	mitochondrion	20.12	32.07
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	9.6	31.31
TraesCS1D01G058000.1	Wheat	cytosol	12.69	30.3
TraesCS6B01G127200.1	Wheat	cytosol	10.73	30.23
TraesCS2B01G126900.1	Wheat	cytosol	11.76	29.84
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	11.46	29.37
Os08t0248400-01	Rice	mitochondrion	13.11	28.86
TraesCS6D01G083300.1	Wheat	mitochondrion	13.21	28.7
Os10t0495100-01	Rice	cytosol, mitochondrion	13.52	28.42
TraesCS1A01G067700.1	Wheat	extracellular	9.8	28.19
HORVU6Hr1G017870.2	Barley	mitochondrion	8.67	28.0
Os10t0501700-00	Rice	cytosol	13.0	27.75
HORVU1Hr1G018190.2	Barley	cytosol	8.15	27.72
Os10t0497366-00	Rice	mitochondrion	11.46	27.68
Os10t0499500-01	Rice	mitochondrion	14.14	27.08
TraesCS6D01G083100.1	Wheat	cytosol	13.62	26.94
OQU82832	Sorghum	cytosol	7.95	26.92
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	12.07	26.65
TraesCSU01G089700.1	Wheat	mitochondrion	13.21	26.56
Zm00001d018982_P001	Maize	mitochondrion	9.49	26.29
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	13.11	26.24
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	13.73	26.03
TraesCS1B01G038200.1	Wheat	mitochondrion	16.92	25.91
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	13.42	25.84
TraesCS6D01G083400.1	Wheat	mitochondrion	13.11	25.76
TraesCS1B01G072700.1	Wheat	cytosol	13.42	25.49
TraesCS7D01G231400.1	Wheat	cytosol, plastid	10.53	25.31
TraesCS6B01G127500.1	Wheat	cytosol	12.8	25.31
TraesCS1D01G058400.1	Wheat	cytosol	13.42	25.24
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	11.25	25.17
TraesCS6A01G015000.1	Wheat	mitochondrion	10.73	25.06
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	12.9	24.75
TraesCSU01G090200.1	Wheat	cytosol	11.25	24.66
KXG34536	Sorghum	mitochondrion	14.55	24.65
TraesCS7B01G469500.1	Wheat	cytosol	14.14	24.38
Os08t0107700-01	Rice	cytosol, mitochondrion	9.39	24.33
TraesCSU01G089800.1	Wheat	mitochondrion	8.77	24.22
Os08t0107800-01	Rice	mitochondrion	15.48	24.04
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	11.87	23.91
TraesCS1B01G092600.1	Wheat	plastid	12.69	23.79
OQU88594	Sorghum	cytosol	12.8	23.75
KXG35774	Sorghum	cytosol, mitochondrion	11.56	23.68
TraesCS1B01G315500.1	Wheat	mitochondrion	7.84	23.68
EES09203	Sorghum	cytosol	19.4	23.56
KXG27690	Sorghum	cytosol, plastid	17.75	23.53
TraesCS1D01G068600.1	Wheat	plastid	8.26	23.53
CDX68679	Canola	cytosol	2.79	23.48
TraesCS6D01G017800.1	Wheat	cytosol	13.0	23.46
HORVU0Hr1G035310.1	Barley	cytosol	14.04	23.37
OQU82827	Sorghum	cytosol	19.2	23.34
TraesCS1A01G031600.1	Wheat	cytosol	15.89	23.26
OQU80148	Sorghum	mitochondrion	17.44	23.25
TraesCS6D01G076500.1	Wheat	plastid	10.84	23.18
Os10t0495200-01	Rice	mitochondrion	18.68	23.15
TraesCS1D01G055300.1	Wheat	cytosol	14.76	23.14
TraesCS1A01G073800.1	Wheat	mitochondrion	7.95	23.12
OQU82823	Sorghum	cytosol	18.99	23.09
EER95949	Sorghum	mitochondrion	15.79	23.08
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	15.79	23.04
TraesCS1B01G086000.1	Wheat	plastid	16.31	23.03
TraesCS1B01G038400.1	Wheat	cytosol	14.45	23.03
TraesCS1A01G031700.1	Wheat	plastid	17.54	22.94
TraesCS1B01G072300.1	Wheat	plastid	13.42	22.89
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	18.58	22.87
OQU82831	Sorghum	cytosol	14.45	22.84
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	8.05	22.81
EES07882	Sorghum	cytosol	18.27	22.78
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	11.25	22.71
Os10t0497300-01	Rice	mitochondrion	18.58	22.67
TraesCS1B01G085400.1	Wheat	cytosol	14.96	22.62
TraesCS1D01G056700.1	Wheat	cytosol	14.14	22.57
Os10t0497432-01	Rice	mitochondrion	6.19	22.56
OQU82836	Sorghum	cytosol	14.24	22.55
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	16.2	22.46
TraesCS1B01G075300.1	Wheat	cytosol	13.83	22.45
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	18.06	22.44
KRH12873	Soybean	cytosol	16.1	22.41
TraesCS1B01G038500.1	Wheat	mitochondrion	18.27	22.41
TraesCS6D01G290900.1	Wheat	mitochondrion	16.92	22.37
TraesCS1B01G039700.1	Wheat	cytosol	14.04	22.37
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	18.16	22.22
TraesCS6B01G021600.1	Wheat	mitochondrion	16.41	22.21
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	8.67	22.16
TraesCS1D01G068500.1	Wheat	mitochondrion	18.47	22.04
TraesCS1A01G054800.1	Wheat	cytosol	13.21	21.99
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	16.2	21.96
TraesCS2D01G532500.1	Wheat	plastid	15.38	21.91
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.45	21.91
TraesCS1B01G073100.1	Wheat	cytosol	13.62	21.78
TraesCS1D01G068900.1	Wheat	mitochondrion	18.27	21.77
TraesCS6D01G017700.1	Wheat	plastid	11.97	21.72
HORVU6Hr1G014310.1	Barley	mitochondrion	15.38	21.69
TraesCS1A01G054700.2	Wheat	mitochondrion	18.16	21.67
TraesCS2A01G531000.1	Wheat	golgi	15.17	21.65
TraesCS1D01G069100.1	Wheat	mitochondrion	14.34	21.62
TraesCS1B01G039100.1	Wheat	mitochondrion	17.44	21.58
TraesCS1D01G068800.1	Wheat	plastid	18.16	21.57
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	15.89	21.57
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	7.22	21.54
TraesCS2A01G526200.1	Wheat	golgi	15.07	21.44
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	16.92	21.41
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	15.79	21.4
KXG28799	Sorghum	plastid	16.72	21.32
HORVU1Hr1G004750.6	Barley	plastid	17.54	21.3
TraesCS1B01G039200.1	Wheat	mitochondrion	17.23	21.3
Zm00001d009733_P001	Maize	cytosol	17.44	21.26
TraesCS1D01G057800.1	Wheat	mitochondrion	7.95	21.21
Os04t0349600-01	Rice	plastid	8.46	21.19
TraesCS1A01G054500.1	Wheat	mitochondrion	17.03	21.15
TraesCS1B01G085900.1	Wheat	mitochondrion	17.75	21.13
TraesCS2D01G532400.1	Wheat	cytosol	13.31	21.11
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	14.34	21.09
TraesCS1A01G067400.1	Wheat	mitochondrion	17.96	21.09
TraesCS1D01G056200.1	Wheat	mitochondrion	17.96	21.09
TraesCS1D01G076500.1	Wheat	mitochondrion	14.45	21.08
HORVU1Hr1G010970.1	Barley	mitochondrion	17.96	21.07
TraesCS1A01G057300.1	Wheat	cytosol	15.58	21.03
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	15.07	20.95
TraesCS2A01G530600.1	Wheat	cytosol	16.51	20.91
TraesCS1A01G067600.1	Wheat	mitochondrion	17.54	20.91
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	14.45	20.8
TraesCS2D01G532600.1	Wheat	plastid	16.62	20.75
OQU82856	Sorghum	cytosol	16.1	20.74
TraesCS1B01G072400.1	Wheat	cytosol	14.86	20.72
TraesCS2B01G559900.1	Wheat	cytosol	11.56	20.66
TraesCS2B01G560700.1	Wheat	plastid	16.41	20.62
HORVU0Hr1G031920.1	Barley	plastid	18.27	20.58
TraesCS1B01G092500.1	Wheat	mitochondrion	16.62	20.56
Os08t0110200-01	Rice	mitochondrion	16.92	20.55
TraesCS1D01G068400.1	Wheat	mitochondrion	17.44	20.53
TraesCS1A01G067000.1	Wheat	mitochondrion	15.17	20.53
HORVU6Hr1G076780.7	Barley	mitochondrion	17.44	20.51
TraesCS1B01G072900.2	Wheat	mitochondrion	18.47	20.5
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	15.07	20.42
TraesCS6A01G083000.1	Wheat	cytosol	9.6	20.39
TraesCS2A01G531100.1	Wheat	cytosol	11.97	20.39
TraesCS2B01G560300.1	Wheat	cytosol	11.97	20.39
TraesCS2D01G532100.1	Wheat	mitochondrion	14.55	20.38
TraesCS1B01G085300.1	Wheat	mitochondrion	16.62	20.33
KXG19780	Sorghum	cytosol	12.38	20.3
TraesCS1B01G071600.1	Wheat	mitochondrion	17.75	20.28
HORVU1Hr1G014040.1	Barley	mitochondrion	17.34	20.17
TraesCS6A01G311600.1	Wheat	mitochondrion	17.34	20.1
HORVU1Hr1G013810.1	Barley	plastid	17.34	20.02
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	17.13	20.0
TraesCS1A01G055800.1	Wheat	mitochondrion	15.89	19.97
Zm00001d007534_P001	Maize	plastid	16.0	19.95
TraesCS6D01G047700.1	Wheat	mitochondrion	14.14	19.83
HORVU1Hr1G010890.5	Barley	cytosol	18.37	19.82
TraesCS2D01G532300.1	Wheat	plastid	15.89	19.79
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	5.16	19.76
TraesCS1D01G076700.1	Wheat	cytosol	6.81	19.76
HORVU1Hr1G011160.2	Barley	cytosol, plastid	18.06	19.55
TraesCS1B01G073200.1	Wheat	cytosol	6.09	19.47
TraesCS1B01G084800.1	Wheat	cytosol	9.29	19.4
HORVU6Hr1G002890.6	Barley	cytosol, plastid	15.89	19.37
Zm00001d007555_P001	Maize	plastid	16.2	19.29
TraesCS6B01G114300.1	Wheat	cytosol	7.74	19.28
HORVU1Hr1G011150.1	Barley	cytosol, plastid	17.54	19.25
HORVU1Hr1G014060.1	Barley	plastid	17.54	19.1
Zm00001d007548_P001	Maize	plastid	16.0	19.04
TraesCS1D01G076900.1	Wheat	plastid	12.9	19.03
Zm00001d007559_P001	Maize	plastid	16.0	18.97
Zm00001d007531_P001	Maize	plastid	15.89	18.92
TraesCS1D01G056600.1	Wheat	mitochondrion	3.92	18.81
HORVU1Hr1G011300.3	Barley	plastid	17.85	18.8
TraesCS1A01G073700.1	Wheat	cytosol	7.43	18.7
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	13.83	18.69
OQU82833	Sorghum	cytosol	8.57	18.53
TraesCS1D01G068700.1	Wheat	cytosol	8.26	18.22
TraesCS1A01G073600.1	Wheat	mitochondrion	7.33	18.11
TraesCS6A01G014600.1	Wheat	cytosol	7.33	17.97
Zm00001d009735_P001	Maize	cytosol	17.65	17.57
Os04t0351333-00	Rice	cytosol	15.79	17.41
TraesCS1D01G033000.1	Wheat	cytosol	7.22	17.33
TraesCS1D01G058500.1	Wheat	plastid	10.11	17.19
OQU82834	Sorghum	cytosol	17.03	17.13
TraesCS1A01G056000.1	Wheat	cytosol	7.02	16.92
TraesCS6B01G341800.2	Wheat	cytosol	6.81	16.54
TraesCS1B01G038600.1	Wheat	cytosol	6.19	16.53
TraesCS1D01G076400.1	Wheat	cytosol	6.19	16.53
TraesCS1B01G038300.1	Wheat	plastid	8.88	15.75
TraesCS1A01G074000.1	Wheat	mitochondrion	4.54	15.55
TraesCS1A01G067800.1	Wheat	cytosol	5.99	15.51
TraesCS1A01G066600.1	Wheat	mitochondrion	4.13	15.21
TraesCS1D01G067600.1	Wheat	cytosol	5.68	15.07
HORVU1Hr1G011400.44	Barley	plastid	9.39	14.77
TraesCS1A01G055500.1	Wheat	mitochondrion	3.3	14.75
TraesCS6B01G129100.1	Wheat	cytosol, plastid	4.23	14.24
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	3.3	14.04
TraesCS1A01G055600.1	Wheat	cytosol	4.64	13.85
TraesCS1D01G057700.1	Wheat	cytosol	4.23	12.62
OQU88581	Sorghum	cytosol	13.42	11.96
TraesCS2D01G532200.1	Wheat	cytosol	3.61	11.95

Protein Annotations

Gene3D:1.10.150.460	Gene3D:1.10.246.90	Gene3D:1.10.287.660	Gene3D:1.25.40.10	MapMan:17.1.1.2.1.5.2	UniProt:A0A0R0IGR1
EMBL:ACUP02005908	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G175800	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009451
GO:GO:0009987	GO:GO:0016787	GO:GO:0043231	GO:GO:0090305	InterPro:Helix_hairpin_bin_sf	InterPro:IPR002687
InterPro:IPR002885	InterPro:IPR011990	InterPro:IPR029012	EnsemblPlants:KRH39064	ProteinID:KRH39064	ProteinID:KRH39064.1
InterPro:NOSIC	InterPro:Nop_dom	InterPro:Nop_dom_sf	PFAM:PF01798	PFAM:PF12854	PFAM:PF13041
PFAM:PF13812	PFscan:PS51358	PFscan:PS51375	PANTHER:PTHR44149	PANTHER:PTHR44149:SF3	InterPro:Pentatricopeptide_repeat
SMART:SM00931	SUPFAM:SSF81901	SUPFAM:SSF89124	TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI0006ED5B57
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:39994952..39999450

Molecular Weight (calculated)

108814.0 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.216

Length

969 amino acids

Sequence
(BLAST)

001: MSFSRRLRFS VSLSIPNFSS FLQNSSHSHF HSQPPSIQNV DDAVSQFNRM LCMRHTPPII QFNKILDSFA KMKHYSTAVS LSHRLELKGI QPDLITLNIL
101: INCFCHMGQI TFGFSVLAKI LKRGYPPDTV TLNTLIKGLC LKGQVKKALH FHDKLLAQGF QLNQVSYATL INGVCKIGDT RGAIKLLRKI DGRLTKPNVE
201: MYSTIIDALC KYQLVSEAYG LFSEMTVKGI SADVVTYSTL IYGFCIEGKL KEAIGLLNEM VLKTINPNVY TYNILVDALC KEGKVKEAKS VLAVMLKACV
301: KPDVITYSTL MDGYFLVYEV KKAQHVFNAM SLMGVTPDVH TYTILINGFC KNKMVDEALN LFKEMHQKNM VPGIVTYSSL IDGLCKSGRI PYVWDLIDEM
401: RDRGQPADVI TYSSLIDGLC KNGHLDRAIA LFNKMKDQEI RPNIFTFTIL LDGLCKGGRL KDAQEVFQDL LTKGYHLNVY TYNVMINGHC KQGLLEEALT
501: MLSKMEDNGC IPNAFTFETI IIALFKKDEN DKAEKLLRQM IARGLFNEFD SELLRGVRLH FDRDLEKAQL GLGHSYSRAK VKFNVNRADN IVIQAIFLLD
601: TLDKDINSFS MRVRWFVLDK LLKIINDNYL YAKVAKFIED KSKLSEDKIA AVTDIVRDED KAKEIVEAAK ASMGQYLSPV DLINVQQFAQ RVMDLSKYRR
701: KLYDYLVAKM NDIALNLASL IGEVVGARLI SHAGSLTNLA KCPSSTLQIL GTEKALFRAL KTRGHTPKYG LIFHSSFIGR ASAKNKGPIA RYLANKCSIA
801: SLIDCFSGLG TTTFGEKLRE QVEERLDFYD KGVAPRKNID VMKLAIESVE NKDTAMEIEA PVEVSGKKAK KKHTAVVTDD MAVDKPTETT NGDALEDHKS
901: EKKKRKKEKR KLDTENDQAM DDGANGVESE QDGAVKKKKK KDKKGDNGEV LVAAIETKKK KNKSKNRDT

Best Arabidopsis Sequence Match ( AT3G12860.1 )
(BLAST)

001: MKIYLLSESP SGYGLFEGHG SDEIGQNTEA VRSSVSDLSR FGRVVQLTAF HPFQSALDAL NQINAVSEGY MSDELRSFLE LNLPKVKEGK KPKFSLGVSE
101: PKIGSCIFEA TKIPCQSNEF VHELLRGVRQ HFDRFIKDLK PGDLEKAQLG LAHSYSRAKV KFNVNRVDNM VIQAIFMLDT LDKDINSFAM RVREWYSWHF
201: PELVKIVNDN YLYAKVSKII VDKSKLSEEH IPMLTEALGD EDKAREVIEA GKASMGQDLS PVDLINVQTF AQRVMDLADY RKKLYDYLVT KMSDIAPNLA
301: ALIGEMVGAR LISHAGSLTN LAKCPSSTLQ ILGAEKALFR ALKTRGNTPK YGLIFHSSFI GRASAKNKGR IARFLANKCS IASRIDCFSD NSTTAFGEKL
401: REQVEERLDF YDKGVAPRKN VDVMKEVLEN LEKKDEGEKT VDASEKKKKR KTEEKEEEKE EEKSKKKKKK SKAVEGEELT ATDNGHSKKK KKTKSQDDE

Arabidopsis Description

NOP56-like pre RNA processing ribonucleoprotein [Source:UniProtKB/TrEMBL;Acc:Q9LTV0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.