CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91265
OQU91413

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G62670.1	EER91265	AT4G26630.1	25387881
AT1G62670.1	OQU91413	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG19780	Sorghum	cytosol	54.26	73.27
OQU82833	Sorghum	cytosol	38.85	69.2
OQU82836	Sorghum	cytosol	52.76	68.79
KXG27690	Sorghum	cytosol, plastid	61.4	67.03
OQU82827	Sorghum	cytosol	66.92	67.0
OQU82823	Sorghum	cytosol	66.79	66.88
EES07882	Sorghum	cytosol	64.91	66.67
OQU80148	Sorghum	mitochondrion	59.4	65.2
OQU82831	Sorghum	cytosol	48.62	63.3
OQU82832	Sorghum	cytosol	22.68	63.29
OQU82856	Sorghum	cytosol	50.0	53.06
OQU82834	Sorghum	cytosol	62.41	51.71
Os10t0495200-01	Rice	mitochondrion	49.75	50.77
Os10t0501700-00	Rice	cytosol	28.57	50.22
Os10t0497300-01	Rice	mitochondrion	49.87	50.13
Os10t0495100-01	Rice	cytosol, mitochondrion	28.7	49.67
Os10t0497366-00	Rice	mitochondrion	24.44	48.63
Os10t0497432-01	Rice	mitochondrion	16.17	48.5
Os08t0248400-01	Rice	mitochondrion	26.44	47.95
Os08t0110200-01	Rice	mitochondrion	46.62	46.62
Os10t0499500-01	Rice	mitochondrion	29.07	45.85
OQU88594	Sorghum	cytosol	29.95	45.79
Os08t0107800-01	Rice	mitochondrion	33.96	43.43
KXG28799	Sorghum	plastid	40.98	43.03
EER95949	Sorghum	mitochondrion	35.59	42.84
KXG35774	Sorghum	cytosol, mitochondrion	24.94	42.07
KXG34536	Sorghum	mitochondrion	28.7	40.03
Os08t0107700-01	Rice	cytosol, mitochondrion	18.3	39.04
KRH39074	Soybean	cytosol	22.18	35.61
Solyc06g007280.2.1	Tomato	cytosol	11.28	35.29
KRH39072	Soybean	cytosol	21.93	35.28
KRH39054	Soybean	cytosol	21.93	35.21
KRH39057	Soybean	cytosol	21.93	35.21
KRH39004	Soybean	cytosol	21.8	35.01
Bra027636.1-P	Field mustard	cytosol	13.91	34.26
KRH39112	Soybean	cytosol	21.18	34.0
KRH40513	Soybean	plastid	14.66	33.33
KRH08635	Soybean	cytosol, golgi, mitochondrion, plastid	20.93	33.07
VIT_12s0028g02320.t01	Wine grape	mitochondrion	19.67	32.91
VIT_14s0081g00110.t01	Wine grape	cytosol	20.18	32.79
Bra036649.1-P	Field mustard	cytosol	16.04	32.74
KRH09084	Soybean	plastid	20.8	32.49
KRH08636	Soybean	cytosol	21.18	32.38
KRH48615	Soybean	mitochondrion	22.06	32.29
KRH08607	Soybean	cytosol	22.56	32.09
KRH39066	Soybean	cytosol	22.31	32.07
VIT_14s0081g00120.t01	Wine grape	plastid	23.31	31.9
KRH08628	Soybean	plastid	22.06	31.88
Solyc06g005220.2.1	Tomato	cytosol	16.17	31.77
AT1G63330.2	Thale cress	cytosol	22.18	31.66
KRH39050	Soybean	mitochondrion	21.05	31.58
Bra026882.1-P	Field mustard	cytosol	21.05	31.46
KRH08277	Soybean	plastid	22.18	31.22
Bra026884.1-P	Field mustard	cytosol	17.79	30.94
KRH08671	Soybean	cytosol, mitochondrion	21.43	30.92
AT1G63400.1	Thale cress	cytosol, plastid	22.31	30.85
KRH08639	Soybean	mitochondrion, plastid	21.8	30.8
KRH09121	Soybean	mitochondrion	20.55	30.71
AT5G16640.1	Thale cress	mitochondrion	19.3	30.56
KRH08625	Soybean	plastid	22.06	30.56
VIT_14s0081g00270.t01	Wine grape	plastid	22.18	30.52
AT1G12620.1	Thale cress	cytosol, mitochondrion	23.68	30.43
AT1G62930.1	Thale cress	plastid	23.93	30.37
PGSC0003DMT400052977	Potato	cytosol	14.79	30.33
Bra016762.1-P	Field mustard	mitochondrion	22.81	29.98
KRH40400	Soybean	plastid	21.68	29.98
KRH31646	Soybean	cytosol	19.42	29.92
KRH00678	Soybean	endoplasmic reticulum, extracellular, plastid	19.67	29.9
KRH17148	Soybean	mitochondrion	20.3	29.72
AT1G12300.1	Thale cress	mitochondrion	23.68	29.67
KRH09082	Soybean	cytosol	15.16	29.66
Bra027029.1-P	Field mustard	mitochondrion	9.02	29.63
KRH25652	Soybean	cytosol, golgi	20.05	29.63
AT1G63130.1	Thale cress	mitochondrion	23.18	29.37
AT1G62914.1	Thale cress	mitochondrion	19.42	29.36
PGSC0003DMT400008757	Potato	cytosol	18.3	29.32
KRH09154	Soybean	mitochondrion	20.43	29.32
AT1G63080.3	Thale cress	mitochondrion	22.56	29.32
Bra006187.1-P	Field mustard	plastid	10.65	29.21
AT1G62670.1	Thale cress	mitochondrion	23.06	29.21
AT1G12775.1	Thale cress	cytosol, mitochondrion	23.56	29.19
PGSC0003DMT400008759	Potato	cytosol	11.65	29.15
AT1G63070.1	Thale cress	mitochondrion	21.55	29.15
AT1G62910.1	Thale cress	mitochondrion	23.06	29.11
Bra026971.1-P	Field mustard	mitochondrion	22.93	29.09
Bra028267.1-P	Field mustard	mitochondrion	22.81	29.07
Bra026958.1-P	Field mustard	mitochondrion	23.18	29.04
AT1G63150.1	Thale cress	mitochondrion	22.81	28.93
AT3G22470.1	Thale cress	cytosol, mitochondrion	22.43	28.92
AT1G62720.1	Thale cress	mitochondrion	17.54	28.87
AT1G62590.1	Thale cress	mitochondrion	22.93	28.86
KRH41817	Soybean	mitochondrion	20.05	28.83
AT1G64583.1	Thale cress	mitochondrion	18.42	28.71
AT3G16710.1	Thale cress	mitochondrion	18.17	28.6
Bra036651.1-P	Field mustard	mitochondrion	19.17	28.6
Bra021192.1-P	Field mustard	plastid	18.05	28.57
Solyc06g007740.1.1	Tomato	cytosol	21.05	28.47
Bra026957.1-P	Field mustard	mitochondrion	21.43	28.36
Solyc06g007300.1.1	Tomato	extracellular	20.93	28.21
KRH09095	Soybean	plastid	20.68	28.21
VIT_14s0081g00280.t01	Wine grape	mitochondrion	22.56	28.17
AT1G64580.1	Thale cress	mitochondrion	18.42	28.11
Solyc06g007810.1.1	Tomato	cytosol	9.4	27.99
PGSC0003DMT400025074	Potato	cytosol	19.3	27.9
PGSC0003DMT400015293	Potato	mitochondrion	21.3	27.87
PGSC0003DMT400015298	Potato	mitochondrion	21.3	27.87
Bra026954.1-P	Field mustard	mitochondrion	22.68	27.85
KRH09097	Soybean	plastid	20.3	27.79
Bra027026.1-P	Field mustard	mitochondrion	18.17	27.72
Bra025516.1-P	Field mustard	cytosol, mitochondrion	16.54	27.67
Bra027658.1-P	Field mustard	cytosol, mitochondrion	18.8	27.62
AT1G06580.1	Thale cress	mitochondrion	17.29	27.6
PGSC0003DMT400008760	Potato	mitochondrion	20.18	27.47
PGSC0003DMT400053185	Potato	mitochondrion	20.3	27.46
Bra031731.1-P	Field mustard	mitochondrion	17.42	27.36
Bra026836.1-P	Field mustard	cytosol, mitochondrion	16.79	27.29
Solyc04g080120.1.1	Tomato	extracellular	20.93	27.29
AT1G62680.2	Thale cress	plastid	18.67	27.19
PGSC0003DMT400056665	Potato	mitochondrion	20.05	27.16
VIT_14s0030g02280.t01	Wine grape	plastid	19.05	27.09
AT5G41170.1	Thale cress	mitochondrion	17.79	26.95
KRH08599	Soybean	cytosol, plastid	22.43	26.76
AT1G12700.2	Thale cress	cytosol	20.68	26.7
PGSC0003DMT400052971	Potato	mitochondrion	19.55	26.31
PGSC0003DMT400056663	Potato	plastid	19.17	26.02
PGSC0003DMT400025087	Potato	endoplasmic reticulum	16.04	25.86
PGSC0003DMT400025067	Potato	cytosol	15.29	25.63
PGSC0003DMT400053182	Potato	cytosol	19.17	25.54
AT4G26800.2	Thale cress	mitochondrion, plastid	16.29	25.29
PGSC0003DMT400053556	Potato	mitochondrion	14.54	25.27
Bra026401.1-P	Field mustard	plastid	16.54	24.67
CDX68679	Canola	cytosol	3.51	24.35
KRH09085	Soybean	mitochondrion	21.43	24.29
Bra027726.1-P	Field mustard	mitochondrion	14.04	23.78
VIT_14s0030g02260.t01	Wine grape	cytosol	12.91	23.25
AT1G64100.2	Thale cress	cytosol	22.68	22.46
OQU88581	Sorghum	cytosol	30.08	22.08
Bra027656.1-P	Field mustard	cytosol	25.06	21.25
KRH12873	Soybean	cytosol	17.29	19.83
KRH39064	Soybean	cytosol	23.56	19.4
Bra016758.1-P	Field mustard	plastid	23.43	16.13

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	UniProt:C5Y420	EnsemblPlants:EES09203	ProteinID:EES09203	ProteinID:EES09203.2
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003824	GO:GO:0004518	GO:GO:0004519
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009451	GO:GO:0009987	GO:GO:0016787	GO:GO:0043231
GO:GO:0090305	InterPro:IPR002885	InterPro:IPR011990	PFAM:PF01535	PFAM:PF12854	PFAM:PF13041
PFAM:PF13812	PFscan:PS51375	PANTHER:PTHR24015	PANTHER:PTHR24015:SF302	InterPro:Pentatricopeptide_repeat	EnsemblPlantsGene:SORBI_3005G024600
TIGRFAMs:TIGR00756	InterPro:TPR-like_helical_dom_sf	UniParc:UPI00081AB780	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:2217216..2219804

Molecular Weight (calculated)

89088.7 Da

IEP (calculated)

6.550

GRAVY (calculated)

0.037

Length

798 amino acids

Sequence
(BLAST)

001: MSRRASAARD RCLELERVIA DRARSGSLGI DDALKLFDEL LPHARPASVR AFNHLLNVVA RARCSSTSEL AVSLFNRMAR ACSNKVRPDL CTYSILTGCF
101: CRLGRIEHGF AAFGLILKTG WRVNEVVINQ LLNGLCDAKR VDEAMDILLR RMPEFGCMPN VVSCNTLLKG LCNEKRVEEA LELLHTMAED GGGNCTPNVV
201: TYNTIIDGLC KAQAVDRAEG VLQHMIDKGV KLDVVTYSTI IDGLCKAQAV DRAEGVLQHM IDKGVKPDVV TYNTIIDGLC KAQAVDRAEG VLQHMIDKGV
301: KPDVVTYNTI IDGLCKAQAV DRADGVLQHM IDKDVKPDIQ TYNCLIHGYL STGEWKEVVR RLEEMYARDL MVANGISPNN YIFNIVLCAY AKKAMIDEAM
401: HIFSRMSQHG LSPDVVTYGI LIDALCKLGR VDDAVLKFNQ MINDGVTPNS VVFNSLVYGL CTVDRWEKAE ELFFEMWDQG VRPNVVFFNT IMCNLCNEGQ
501: VMVAQRLIDS MERVGVRPNV ISYNTLIGGH CLAGRTDEAA QLLDVMVSVG LKPDLISYDT LLRGYCKTGR IDNAYCLFRE MLRKGVTPGA VTYSTILQGL
601: FHTRRFSEAK ELYLNMIKSG QQWDIYTYNI ILNGLCKTNC VDEAFKIFQS LCSKDLRPNI ITFTIMIDVL FKGGRKKDAM DLFASIPSHG LVPNVVTYCI
701: MMKNIIQEGL LDEFDNLFLA MEKSGCTPDS VMLNAIIRSL LGRGEIMRAG AYLSKIDEMN FSLEASTTSL LISLFSREEY KNHAKSLPEK YLFLEEVN

Best Arabidopsis Sequence Match ( AT1G63130.1 )
(BLAST)

001: MRRLFAISST GNRFVHRSLL GKGKCGTAPP SFSHCSFWVR DFSGVRYDYR KISINRLNDL KLDDAVNLFG DMVKSRPFPS IVEFSKLLSA IAKMNKFDLV
101: ISLGEQMQNL GISHNLYTYS ILINCFCRRS QLSLALAVLA KMMKLGYEPD IVTLNSLLNG FCHGNRISDA VSLVGQMVEM GYQPDSFTFN TLIHGLFRHN
201: RASEAVALVD RMVVKGCQPD LVTYGIVVNG LCKRGDIDLA LSLLKKMEQG KIEPGVVIYN TIIDALCNYK NVNDALNLFT EMDNKGIRPN VVTYNSLIRC
301: LCNYGRWSDA SRLLSDMIER KINPNVVTFS ALIDAFVKEG KLVEAEKLYD EMIKRSIDPD IFTYSSLING FCMHDRLDEA KHMFELMISK DCFPNVVTYN
401: TLIKGFCKAK RVDEGMELFR EMSQRGLVGN TVTYTTLIHG FFQARECDNA QIVFKQMVSD GVLPDIMTYS ILLDGLCNNG KVETALVVFE YLQRSKMEPD
501: IYTYNIMIEG MCKAGKVEDG WDLFCSLSLK GVKPNVVTYT TMMSGFCRKG LKEEADALFR EMKEEGPLPD SGTYNTLIRA HLRDGDKAAS AELIREMRSC
601: RFVGDASTIG LVTNMLHDGR LDKSFLKMLS

Arabidopsis Description

Pentatricopeptide repeat-containing protein At1g63130, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9CAN0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.