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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 2
  • nucleus 1
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400037344
PGSC0003DMT400057390

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 PGSC0003DMT400037344 AT4G26630.1 25387881
AT1G62670.1 PGSC0003DMT400057390 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400025087 Potato endoplasmic reticulum 93.49 89.9
PGSC0003DMT400008759 Potato cytosol 46.85 69.91
PGSC0003DMT400052977 Potato cytosol 56.72 69.41
PGSC0003DMT400008757 Potato cytosol 66.39 63.45
PGSC0003DMT400025074 Potato cytosol 72.48 62.5
PGSC0003DMT400056665 Potato mitochondrion 72.06 58.23
PGSC0003DMT400053185 Potato mitochondrion 72.06 58.14
PGSC0003DMT400056663 Potato plastid 70.8 57.31
PGSC0003DMT400052971 Potato mitochondrion 70.8 56.83
PGSC0003DMT400008760 Potato mitochondrion 69.96 56.83
PGSC0003DMT400053556 Potato mitochondrion 52.1 54.03
PGSC0003DMT400053182 Potato cytosol 66.18 52.59
PGSC0003DMT400015293 Potato mitochondrion 51.68 40.33
PGSC0003DMT400015298 Potato mitochondrion 51.68 40.33
CDY26589 Canola cytosol 5.25 36.23
CDY51169 Canola cytosol 32.14 36.17
VIT_14s0081g00110.t01 Wine grape cytosol 37.18 36.05
CDY16110 Canola extracellular 30.88 35.85
Bra027029.1-P Field mustard mitochondrion 18.28 35.8
VIT_12s0028g02320.t01 Wine grape mitochondrion 34.87 34.8
Bra027636.1-P Field mustard cytosol 23.53 34.57
CDY09968 Canola cytosol 21.22 34.35
CDY06217 Canola cytosol 21.01 34.13
CDY16002 Canola cytosol 21.85 33.44
CDY16031 Canola cytosol 21.85 33.44
CDY39810 Canola cytosol 27.1 32.99
CDY03257 Canola cytosol 26.89 32.74
CDY46909 Canola mitochondrion 19.96 32.53
Bra026884.1-P Field mustard cytosol 31.09 32.24
VIT_14s0081g00270.t01 Wine grape plastid 39.29 32.24
Bra036649.1-P Field mustard cytosol 26.47 32.23
CDY26588 Canola extracellular 21.64 31.79
CDY34688 Canola cytosol 23.74 31.22
CDX71969 Canola cytosol 25.84 31.06
VIT_14s0081g00120.t01 Wine grape plastid 38.03 31.05
KRH70370 Soybean cytosol 35.08 30.7
CDX67634 Canola cytosol 26.89 30.26
Bra006187.1-P Field mustard plastid 18.49 30.24
CDY26607 Canola cytosol 28.78 29.98
KRH38755 Soybean mitochondrion 37.18 29.8
Bra026882.1-P Field mustard cytosol 33.19 29.59
KRH09256 Soybean mitochondrion 34.66 29.52
KRH49698 Soybean cytosol 35.29 29.47
AT1G63330.2 Thale cress cytosol 34.45 29.34
Bra031731.1-P Field mustard mitochondrion 31.09 29.13
VIT_14s0030g02260.t01 Wine grape cytosol 26.89 28.89
KRH75045 Soybean mitochondrion 36.13 28.81
VIT_14s0081g00280.t01 Wine grape mitochondrion 38.66 28.8
AT3G22470.1 Thale cress cytosol, mitochondrion 37.4 28.76
CDY16033 Canola cytosol 9.03 28.67
CDY35831 Canola mitochondrion 30.88 28.54
CDY00489 Canola mitochondrion 34.87 28.33
KRH75063 Soybean mitochondrion, plastid 35.92 28.31
KRH75048 Soybean mitochondrion 36.13 28.29
VIT_14s0030g02280.t01 Wine grape plastid 33.19 28.16
AT1G12700.2 Thale cress cytosol 36.55 28.16
CDY33797 Canola mitochondrion 30.25 28.12
CDY34375 Canola mitochondrion 30.46 28.05
AT1G62910.1 Thale cress mitochondrion 37.18 28.01
KRH58843 Soybean nucleus 35.92 27.99
Bra026958.1-P Field mustard mitochondrion 37.4 27.94
AT1G62930.1 Thale cress plastid 36.76 27.82
AT1G62670.1 Thale cress mitochondrion 36.76 27.78
Bra026957.1-P Field mustard mitochondrion 35.08 27.69
KRH42744 Soybean mitochondrion 35.5 27.66
CDY08386 Canola cytosol 25.84 27.64
Bra027658.1-P Field mustard cytosol, mitochondrion 31.51 27.62
AT1G12620.1 Thale cress cytosol, mitochondrion 35.71 27.38
AT1G63130.1 Thale cress mitochondrion 36.13 27.3
HORVU1Hr1G010990.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 17.02 27.27
Bra028267.1-P Field mustard mitochondrion 35.71 27.16
CDY34969 Canola mitochondrion 28.78 27.08
CDY26565 Canola mitochondrion 32.35 27.07
Bra025516.1-P Field mustard cytosol, mitochondrion 27.1 27.04
AT5G16640.1 Thale cress mitochondrion 28.57 26.98
CDY48949 Canola mitochondrion 27.1 26.82
Bra021192.1-P Field mustard plastid 28.36 26.79
AT1G63150.1 Thale cress mitochondrion 35.29 26.71
Bra026971.1-P Field mustard mitochondrion 35.29 26.71
CDY26593 Canola cytosol 34.03 26.6
CDY31272 Canola mitochondrion 31.72 26.58
AT1G12300.1 Thale cress mitochondrion 35.5 26.53
CDY46394 Canola mitochondrion 26.68 26.4
AT1G63080.3 Thale cress mitochondrion 34.03 26.38
Bra016762.1-P Field mustard mitochondrion 33.61 26.36
CDY68929 Canola mitochondrion 33.61 26.36
AT1G63070.1 Thale cress mitochondrion 32.56 26.27
Bra036651.1-P Field mustard mitochondrion 29.41 26.17
TraesCS6B01G127200.1 Wheat cytosol 18.91 26.16
CDX69436 Canola plastid 27.31 26.1
CDY25492 Canola mitochondrion 26.89 26.07
AT3G16710.1 Thale cress mitochondrion 27.73 26.04
Bra027026.1-P Field mustard mitochondrion 28.57 26.0
AT1G63400.1 Thale cress cytosol, plastid 31.51 26.0
AT1G62720.1 Thale cress mitochondrion 26.47 25.98
TraesCS2B01G126900.1 Wheat cytosol 20.8 25.92
AT1G62590.1 Thale cress mitochondrion 34.45 25.87
CDY16026 Canola cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 29.83 25.87
Bra026954.1-P Field mustard mitochondrion 35.29 25.85
TraesCS1A01G067700.1 Wheat extracellular 18.28 25.82
Bra026836.1-P Field mustard cytosol, mitochondrion 26.47 25.66
HORVU1Hr1G018190.2 Barley cytosol 15.34 25.61
AT1G62680.2 Thale cress plastid 29.41 25.55
AT1G64583.1 Thale cress mitochondrion 27.31 25.39
AT1G62914.1 Thale cress mitochondrion 28.15 25.38
CDY49646 Canola mitochondrion 26.68 25.35
CDY46912 Canola mitochondrion 26.26 25.3
CDY34870 Canola mitochondrion 15.13 25.09
AT1G12775.1 Thale cress cytosol, mitochondrion 33.82 25.0
CDY33753 Canola mitochondrion 23.11 24.77
AT5G41170.1 Thale cress mitochondrion 27.31 24.67
CDY65983 Canola mitochondrion 21.85 24.64
CDY25522 Canola mitochondrion, plastid 23.11 24.61
AT1G64580.1 Thale cress mitochondrion 26.68 24.28
CDY66357 Canola cytosol 19.33 24.27
AT1G06580.1 Thale cress mitochondrion 25.21 24.0
HORVU1Hr1G011250.1 Barley cytosol 14.71 23.73
Zm00001d018982_P001 Maize mitochondrion 17.44 23.71
CDY29251 Canola mitochondrion 25.0 23.47
CDY28348 Canola mitochondrion, plastid 29.41 23.41
TraesCS6A01G099100.1 Wheat cytosol, mitochondrion 18.49 23.28
AT4G26800.2 Thale cress mitochondrion, plastid 25.0 23.15
TraesCS6D01G083300.1 Wheat mitochondrion 21.64 23.09
CDY66358 Canola mitochondrion 18.91 23.08
CDY47835 Canola mitochondrion 21.01 22.88
Bra026401.1-P Field mustard plastid 25.63 22.8
CDX89301 Canola plastid 25.63 22.8
Bra027726.1-P Field mustard mitochondrion 22.48 22.72
Os10t0501700-00 Rice cytosol 21.64 22.69
TraesCS2A01G530300.1 Wheat mitochondrion, plastid 23.95 22.31
CDY31271 Canola mitochondrion 22.69 22.22
TraesCS1D01G058000.1 Wheat cytosol 18.91 22.17
HORVU6Hr1G017870.2 Barley mitochondrion 13.66 21.67
CDY25519 Canola mitochondrion, plastid 28.99 21.6
CDY16032 Canola mitochondrion 18.49 21.57
TraesCS6A01G099300.1 Wheat cytosol, mitochondrion 21.85 21.49
TraesCS1D01G058400.1 Wheat cytosol 23.11 21.36
TraesCS6D01G017800.1 Wheat cytosol 23.95 21.23
CDX68680 Canola mitochondrion 20.59 21.21
TraesCS6A01G083000.1 Wheat cytosol 19.96 20.83
TraesCS7B01G469500.1 Wheat cytosol 24.58 20.82
Os10t0497366-00 Rice mitochondrion 17.44 20.7
TraesCS6B01G127500.1 Wheat cytosol 21.01 20.41
TraesCSU01G090200.1 Wheat cytosol 18.7 20.14
TraesCS6D01G083400.1 Wheat mitochondrion 20.8 20.08
TraesCS2B01G560300.1 Wheat cytosol 23.95 20.04
Os08t0248400-01 Rice mitochondrion 18.49 20.0
TraesCS1B01G072700.1 Wheat cytosol 21.43 20.0
AT1G64100.2 Thale cress cytosol 33.82 19.98
TraesCS2B01G559900.1 Wheat cytosol 22.69 19.93
TraesCS1D01G055300.1 Wheat cytosol 25.84 19.9
TraesCS6A01G101100.1 Wheat mitochondrion, plastid 21.01 19.88
KXG35774 Sorghum cytosol, mitochondrion 19.75 19.87
TraesCS6D01G083100.1 Wheat cytosol 20.38 19.8
Os10t0495100-01 Rice cytosol, mitochondrion 19.12 19.74
CDY16003 Canola cytosol, plastid 16.18 19.69
TraesCS7D01G231400.1 Wheat cytosol, plastid 16.6 19.6
TraesCS1B01G073100.1 Wheat cytosol 24.58 19.31
CDY15970 Canola cytosol 3.78 19.15
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 19.33 19.13
TraesCS1D01G056700.1 Wheat cytosol 24.37 19.11
TraesCS6D01G017700.1 Wheat plastid 21.43 19.1
HORVU0Hr1G035310.1 Barley cytosol 23.32 19.07
TraesCS1A01G054800.1 Wheat cytosol 23.32 19.07
TraesCS6B01G129200.1 Wheat cytosol, nucleus, plastid 20.17 19.01
TraesCS1B01G075300.1 Wheat cytosol 23.74 18.93
TraesCS1B01G038400.1 Wheat cytosol 24.16 18.91
KXG34536 Sorghum mitochondrion 22.69 18.88
TraesCS1B01G085400.1 Wheat cytosol 25.42 18.88
TraesCS1B01G073200.1 Wheat cytosol 11.97 18.81
TraesCS6B01G127400.1 Wheat cytosol, mitochondrion 17.02 18.71
TraesCS2B01G560000.1 Wheat mitochondrion, plastid 17.23 18.68
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 26.05 18.67
TraesCSU01G089700.1 Wheat mitochondrion 18.91 18.67
HORVU1Hr1G011020.4 Barley cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 25.0 18.62
Os10t0499500-01 Rice mitochondrion 19.75 18.58
TraesCS1B01G039700.1 Wheat cytosol 23.53 18.42
TraesCS6A01G015000.1 Wheat mitochondrion 15.97 18.31
TraesCS2D01G533000.1 Wheat cytosol, extracellular 25.21 18.21
TraesCS1B01G038200.1 Wheat mitochondrion 23.95 18.01
TraesCS6B01G114300.1 Wheat cytosol 14.71 17.99
TraesCS2A01G531000.1 Wheat golgi 25.63 17.97
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 26.26 17.93
TraesCS6B01G021600.1 Wheat mitochondrion 26.89 17.88
TraesCS6B01G021200.1 Wheat cytosol, mitochondrion 12.18 17.85
OQU88594 Sorghum cytosol 19.54 17.82
TraesCS6D01G047700.1 Wheat mitochondrion 25.84 17.8
HORVU6Hr1G014310.1 Barley mitochondrion 25.63 17.76
TraesCS1A01G031600.1 Wheat cytosol 24.58 17.67
TraesCSU01G089800.1 Wheat mitochondrion 13.03 17.66
TraesCS6D01G076500.1 Wheat plastid 16.81 17.66
Os08t0107700-01 Rice cytosol, mitochondrion 13.87 17.65
OQU82831 Sorghum cytosol 22.69 17.62
TraesCS2A01G531100.1 Wheat cytosol 21.01 17.57
TraesCS5B01G250800.1 Wheat cytosol, mitochondrion 26.26 17.48
TraesCS2A01G526200.1 Wheat golgi 25.0 17.47
TraesCS1B01G072400.1 Wheat cytosol 25.42 17.41
CDX81633 Canola extracellular, golgi, plasma membrane 33.19 17.38
TraesCS6A01G014800.1 Wheat cytosol, mitochondrion 26.05 17.37
TraesCS1D01G068600.1 Wheat plastid 12.39 17.35
TraesCS1B01G086000.1 Wheat plastid 25.0 17.35
Os08t0107800-01 Rice mitochondrion 22.69 17.31
Zm00001d007534_P001 Maize plastid 28.15 17.25
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 24.37 17.24
TraesCS6A01G014600.1 Wheat cytosol 14.29 17.22
EER95949 Sorghum mitochondrion 23.95 17.19
TraesCS1A01G057300.1 Wheat cytosol 25.84 17.13
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 25.63 17.06
TraesCS2D01G532100.1 Wheat mitochondrion 24.79 17.05
TraesCS1A01G067000.1 Wheat mitochondrion 25.63 17.04
KXG28799 Sorghum plastid 27.1 16.97
Zm00001d007531_P001 Maize plastid 28.99 16.95
Zm00001d007555_P001 Maize plastid 28.99 16.95
TraesCS6B01G045200.1 Wheat cytosol, mitochondrion 25.42 16.92
TraesCS2D01G532500.1 Wheat plastid 24.16 16.91
TraesCS6B01G021500.1 Wheat cytosol, mitochondrion 13.45 16.89
TraesCS1A01G031700.1 Wheat plastid 26.05 16.73
TraesCS1D01G068900.1 Wheat mitochondrion 28.57 16.73
TraesCS1A01G054500.1 Wheat mitochondrion 27.31 16.67
CDY34370 Canola cytosol 28.57 16.57
TraesCS1B01G085300.1 Wheat mitochondrion 27.52 16.54
TraesCS1B01G092600.1 Wheat plastid 17.86 16.44
TraesCS1B01G072300.1 Wheat plastid 19.54 16.37
Zm00001d007548_P001 Maize plastid 27.94 16.34
HORVU7Hr1G029840.1 Barley cytosol, mitochondrion 23.95 16.31
Zm00001d007559_P001 Maize plastid 27.94 16.28
TraesCS1D01G076500.1 Wheat mitochondrion 22.69 16.27
TraesCS6D01G290900.1 Wheat mitochondrion 25.0 16.23
TraesCS1B01G085900.1 Wheat mitochondrion 27.73 16.22
TraesCS2D01G532400.1 Wheat cytosol 20.8 16.2
TraesCS1B01G315500.1 Wheat mitochondrion 10.92 16.2
TraesCS1D01G068400.1 Wheat mitochondrion 27.94 16.16
HORVU1Hr1G014030.2 Barley mitochondrion, plastid 28.15 16.14
TraesCS1A01G067400.1 Wheat mitochondrion 27.94 16.12
TraesCS1D01G056200.1 Wheat mitochondrion 27.94 16.12
TraesCS1A01G067600.1 Wheat mitochondrion 27.52 16.11
OQU82856 Sorghum cytosol 25.42 16.09
OQU82836 Sorghum cytosol 20.59 16.01
Os10t0497300-01 Rice mitochondrion 26.68 15.99
Os10t0495200-01 Rice mitochondrion 26.26 15.98
HORVU6Hr1G002890.6 Barley cytosol, plastid 26.68 15.97
TraesCS2B01G560700.1 Wheat plastid 25.84 15.95
TraesCS1A01G054700.2 Wheat mitochondrion 27.1 15.89
HORVU2Hr1G105460.11 Barley mitochondrion, plastid 15.97 15.83
TraesCS1A01G073600.1 Wheat mitochondrion 13.03 15.82
TraesCS1D01G069100.1 Wheat mitochondrion 21.22 15.71
TraesCS1B01G038500.1 Wheat mitochondrion 26.05 15.7
TraesCS1D01G068500.1 Wheat mitochondrion 26.68 15.64
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 25.84 15.63
EES07882 Sorghum cytosol 25.42 15.57
TraesCS2D01G532300.1 Wheat plastid 25.42 15.55
TraesCS1B01G074600.1 Wheat mitochondrion, plastid 25.42 15.51
Os04t0349600-01 Rice plastid 12.61 15.5
TraesCS1B01G071600.1 Wheat mitochondrion 27.52 15.45
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 25.63 15.4
TraesCS1A01G073800.1 Wheat mitochondrion 10.71 15.32
OQU82823 Sorghum cytosol 25.63 15.31
OQU82827 Sorghum cytosol 25.63 15.31
TraesCS2A01G530600.1 Wheat cytosol 24.58 15.29
EES09203 Sorghum cytosol 25.63 15.29
Zm00001d009733_P001 Maize cytosol 25.42 15.22
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 10.92 15.2
TraesCS1B01G039100.1 Wheat mitochondrion 25.0 15.2
TraesCS1D01G068800.1 Wheat plastid 26.05 15.2
TraesCS1B01G084800.1 Wheat cytosol 14.71 15.09
TraesCS6A01G311600.1 Wheat mitochondrion 26.47 15.07
Bra016758.1-P Field mustard plastid 36.55 15.01
HORVU1Hr1G010970.1 Barley mitochondrion 26.05 15.01
HORVU1Hr1G014040.1 Barley mitochondrion 26.05 14.89
TraesCS1D01G057800.1 Wheat mitochondrion 11.34 14.88
OQU80148 Sorghum mitochondrion 22.69 14.86
TraesCS2D01G532600.1 Wheat plastid 24.16 14.82
KXG27690 Sorghum cytosol, plastid 22.69 14.77
HORVU6Hr1G076780.7 Barley mitochondrion 25.42 14.68
HORVU0Hr1G031920.1 Barley plastid 26.47 14.65
TraesCS1D01G068700.1 Wheat cytosol 13.45 14.58
Bra027656.1-P Field mustard cytosol 28.78 14.56
TraesCS1B01G072900.2 Wheat mitochondrion 26.68 14.55
TraesCS1A01G073700.1 Wheat cytosol 11.76 14.55
HORVU1Hr1G014060.1 Barley plastid 27.1 14.49
HORVU1Hr1G010890.5 Barley cytosol 27.31 14.48
TraesCS1B01G092500.1 Wheat mitochondrion 23.74 14.43
HORVU1Hr1G013810.1 Barley plastid 25.42 14.42
TraesCS1B01G039200.1 Wheat mitochondrion 23.74 14.41
HORVU1Hr1G004750.6 Barley plastid 24.16 14.41
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 23.11 14.36
HORVU1Hr1G011160.2 Barley cytosol, plastid 26.89 14.3
TraesCS1A01G055800.1 Wheat mitochondrion 22.9 14.14
TraesCS1A01G057400.1 Wheat mitochondrion, plastid 21.22 14.09
TraesCS1D01G076400.1 Wheat cytosol 10.71 14.05
OQU82832 Sorghum cytosol 8.4 13.99
Os08t0110200-01 Rice mitochondrion 22.9 13.66
HORVU1Hr1G011150.1 Barley cytosol, plastid 25.21 13.59
HORVU1Hr1G011300.3 Barley plastid 26.26 13.59
CDY31277 Canola plastid 27.31 13.56
TraesCS1D01G076900.1 Wheat plastid 18.7 13.55
Os04t0351333-00 Rice cytosol 24.37 13.2
KXG19780 Sorghum cytosol 16.18 13.03
TraesCS6B01G341800.2 Wheat cytosol 10.71 12.78
TraesCS1D01G076700.1 Wheat cytosol 8.82 12.57
Zm00001d009735_P001 Maize cytosol 25.0 12.23
TraesCS1A01G056000.1 Wheat cytosol 10.29 12.19
TraesCS1A01G067800.1 Wheat cytosol 9.45 12.03
Os10t0497432-01 Rice mitochondrion 6.72 12.03
CDY34680 Canola cytosol 22.69 11.84
OQU82833 Sorghum cytosol 11.13 11.83
OQU82834 Sorghum cytosol 23.32 11.53
HORVU1Hr1G011400.44 Barley plastid 14.92 11.53
TraesCS1D01G067600.1 Wheat cytosol 8.82 11.51
TraesCS6A01G014500.1 Wheat cytosol, mitochondrion 6.09 11.46
TraesCS1D01G058500.1 Wheat plastid 13.45 11.23
TraesCS1D01G033000.1 Wheat cytosol 9.45 11.14
TraesCS1A01G055600.1 Wheat cytosol 7.56 11.08
OQU88581 Sorghum cytosol 24.58 10.76
TraesCS1B01G038600.1 Wheat cytosol 8.19 10.74
TraesCS1D01G057700.1 Wheat cytosol 7.14 10.46
TraesCS6B01G129100.1 Wheat cytosol, plastid 5.67 9.38
TraesCS2D01G532200.1 Wheat cytosol 5.67 9.22
TraesCS1A01G074000.1 Wheat mitochondrion 5.25 8.83
TraesCS1B01G038300.1 Wheat plastid 8.61 7.51
TraesCS1A01G066600.1 Wheat mitochondrion 3.78 6.84
TraesCS1A01G055500.1 Wheat mitochondrion 2.52 5.53
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 2.31 4.82
TraesCS1D01G056600.1 Wheat mitochondrion 1.68 3.96
CDY21063 Canola plastid 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400025067EnsemblPlantsGene:PGSC0003DMG400009682Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR44149PANTHER:PTHR44149:SF3
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375PGSC:PGSC0003DMG400009682SUPFAM:SSF81901
TIGRFAMs:TIGR00756UniParc:UPI0002965886UniProt:M1AKY6MapMan:35.1::
Description
PPR1 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009682]
Coordinates
chr6:-:6463064..6464494
Molecular Weight (calculated)
54635.3 Da
IEP (calculated)
6.862
GRAVY (calculated)
-0.067
Length
476 amino acids
Sequence
(BLAST)
001: MQKLGIPING VILNSEINSY SLMHRADCGF SVLPIYLKNG ISFDVIELFK KLVRKKICEP DEVMYATVMN GLSKKGHTEK TLSLLRLMEQ GNTKPDIFIY
101: TIVVDALCKD RNLDGAISLL NEMKQKGIPP DKVTYSSLID GLCKFGQWEK VRILFSEMVN LNIYPNVRTF TILTDGLCKE GKVEDAEEVM RQMVRKGVEP
201: NMLIYTAIIN GYCLRGELER ARRVFDFMID EKIEPNIISY SVLINGYCKE KQLAEAMQLF HEISQKGSKP DLFTYNILLQ GLFEARKIGS AKEFFAEMLT
301: TGLVPDLYTL CTLLNGYFKY GLVEEAMSFF NKLKREIEYT SIEFYIVVIN GLYKNGELDK ARVIFEKLSL IGMLPNVRTY TIMINGFILE GFLDEAKDML
401: RKMEDNGCMP NNVTYNIFVR GYLRCCKINE MATYMKEMVR KGFSCDADTT ELLVNVIREN PSVLDMIPEF RSEHKK
Best Arabidopsis Sequence Match ( AT1G12700.1 )
(BLAST)
001: MMIKRSITTN MKALRLIQPH LLKTGSLRTD LLCTISSFFS SCERDFSSIS NGNVCFRERL RSGIVDIKKD DAIALFQEMI RSRPLPSLVD FSRFFSAIAR
101: TKQFNLVLDF CKQLELNGIA HNIYTLNIMI NCFCRCCKTC FAYSVLGKVM KLGYEPDTTT FNTLIKGLFL EGKVSEAVVL VDRMVENGCQ PDVVTYNSIV
201: NGICRSGDTS LALDLLRKME ERNVKADVFT YSTIIDSLCR DGCIDAAISL FKEMETKGIK SSVVTYNSLV RGLCKAGKWN DGALLLKDMV SREIVPNVIT
301: FNVLLDVFVK EGKLQEANEL YKEMITRGIS PNIITYNTLM DGYCMQNRLS EANNMLDLMV RNKCSPDIVT FTSLIKGYCM VKRVDDGMKV FRNISKRGLV
401: ANAVTYSILV QGFCQSGKIK LAEELFQEMV SHGVLPDVMT YGILLDGLCD NGKLEKALEI FEDLQKSKMD LGIVMYTTII EGMCKGGKVE DAWNLFCSLP
501: CKGVKPNVMT YTVMISGLCK KGSLSEANIL LRKMEEDGNA PNDCTYNTLI RAHLRDGDLT ASAKLIEEMK SCGFSADASS IKMVIDMLLS GELDKSFLDM
601: LS
Arabidopsis Description
ATP binding;nucleic acid binding;helicases [Source:TAIR;Acc:AT1G12700]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.