Factsheet for AT5G41170.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025516.1-P	Field mustard	cytosol, mitochondrion	67.55	74.63
CDX67634	Canola	cytosol	59.77	74.47
CDY46394	Canola	mitochondrion	67.74	74.22
CDY48949	Canola	mitochondrion	66.98	73.39
AT3G16710.1	Thale cress	mitochondrion	60.91	63.31
AT5G16640.1	Thale cress	mitochondrion	53.7	56.15
AT1G62720.1	Thale cress	mitochondrion	49.53	53.81
AT1G64580.1	Thale cress	mitochondrion	51.42	51.82
AT1G06580.1	Thale cress	mitochondrion	48.96	51.6
AT1G62680.2	Thale cress	plastid	52.94	50.91
AT1G63400.1	Thale cress	cytosol, plastid	55.03	50.26
AT1G64583.1	Thale cress	mitochondrion	47.06	48.44
AT1G62914.1	Thale cress	mitochondrion	47.06	46.97
AT1G63330.2	Thale cress	cytosol	49.15	46.33
AT4G26800.2	Thale cress	mitochondrion, plastid	44.78	45.91
AT1G63080.3	Thale cress	mitochondrion	53.32	45.77
AT1G63130.1	Thale cress	mitochondrion	54.46	45.56
AT1G62590.1	Thale cress	mitochondrion	53.89	44.8
AT1G62670.1	Thale cress	mitochondrion	52.75	44.13
AT1G62930.1	Thale cress	plastid	52.56	44.04
AT1G62910.1	Thale cress	mitochondrion	52.56	43.83
AT1G63070.1	Thale cress	mitochondrion	48.2	43.05
AT1G63150.1	Thale cress	mitochondrion	51.23	42.93
AT3G22470.1	Thale cress	cytosol, mitochondrion	48.39	41.2
AT1G12300.1	Thale cress	mitochondrion	46.68	38.62
AT1G12620.1	Thale cress	cytosol, mitochondrion	45.16	38.33
AT1G12700.2	Thale cress	cytosol	44.78	38.19
VIT_12s0028g02320.t01	Wine grape	mitochondrion	34.35	37.95
AT1G12775.1	Thale cress	cytosol, mitochondrion	44.02	36.02
Solyc06g007280.2.1	Tomato	cytosol	16.32	33.73
KRH70370	Soybean	cytosol	33.78	32.72
PGSC0003DMT400008759	Potato	cytosol	19.73	32.6
VIT_14s0030g02280.t01	Wine grape	plastid	33.97	31.91
KRH42744	Soybean	mitochondrion	36.81	31.75
KRH09256	Soybean	mitochondrion	33.4	31.48
KRH58843	Soybean	nucleus	36.43	31.42
VIT_14s0081g00270.t01	Wine grape	plastid	34.54	31.38
PGSC0003DMT400052977	Potato	cytosol	23.15	31.36
KRH49698	Soybean	cytosol	33.78	31.23
Solyc06g005220.2.1	Tomato	cytosol	23.72	30.79
PGSC0003DMT400008757	Potato	cytosol	29.03	30.72
VIT_14s0081g00120.t01	Wine grape	plastid	33.4	30.19
KRH75045	Soybean	mitochondrion	33.97	29.98
KRH38755	Soybean	mitochondrion	33.78	29.97
VIT_14s0081g00110.t01	Wine grape	cytosol	27.89	29.94
KRH75063	Soybean	mitochondrion, plastid	34.16	29.8
Solyc06g007810.1.1	Tomato	cytosol	14.99	29.48
PGSC0003DMT400008760	Potato	mitochondrion	32.64	29.35
KRH75048	Soybean	mitochondrion	33.59	29.11
PGSC0003DMT400025087	Potato	endoplasmic reticulum	27.13	28.89
PGSC0003DMT400025074	Potato	cytosol	30.17	28.8
VIT_14s0081g00280.t01	Wine grape	mitochondrion	33.97	28.01
PGSC0003DMT400053556	Potato	mitochondrion	24.29	27.89
PGSC0003DMT400056665	Potato	mitochondrion	31.12	27.84
PGSC0003DMT400052971	Potato	mitochondrion	31.31	27.82
Solyc06g007300.1.1	Tomato	extracellular	31.12	27.7
PGSC0003DMT400025067	Potato	cytosol	24.67	27.31
HORVU1Hr1G011250.1	Barley	cytosol	15.18	27.12
Solyc06g007740.1.1	Tomato	cytosol	30.36	27.12
PGSC0003DMT400056663	Potato	plastid	29.98	26.87
PGSC0003DMT400053185	Potato	mitochondrion	29.79	26.61
Solyc04g080120.1.1	Tomato	extracellular	30.74	26.47
PGSC0003DMT400015293	Potato	mitochondrion	30.17	26.07
PGSC0003DMT400015298	Potato	mitochondrion	30.17	26.07
VIT_14s0030g02260.t01	Wine grape	cytosol	21.44	25.51
AT1G64100.2	Thale cress	cytosol	38.52	25.19
TraesCS2B01G126900.1	Wheat	cytosol	18.22	25.13
PGSC0003DMT400053182	Potato	cytosol	28.27	24.87
HORVU1Hr1G010990.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.85	24.58
TraesCS1A01G067700.1	Wheat	extracellular	15.56	24.33
KXG34536	Sorghum	mitochondrion	25.05	23.08
TraesCS6A01G101100.1	Wheat	mitochondrion, plastid	22.01	23.06
TraesCS6A01G099100.1	Wheat	cytosol, mitochondrion	16.51	23.02
Os10t0495100-01	Rice	cytosol, mitochondrion	20.11	22.99
TraesCS2A01G530300.1	Wheat	mitochondrion, plastid	22.2	22.9
Zm00001d018982_P001	Maize	mitochondrion	14.99	22.57
Os10t0501700-00	Rice	cytosol	19.35	22.47
TraesCS6D01G083300.1	Wheat	mitochondrion	18.98	22.42
OQU82832	Sorghum	cytosol	11.95	22.03
HORVU6Hr1G017870.2	Barley	mitochondrion	12.52	22.0
TraesCS1D01G058000.1	Wheat	cytosol	16.89	21.92
TraesCS6D01G089500.1	Wheat	cytosol, mitochondrion, plastid	19.92	21.83
TraesCS6D01G083400.1	Wheat	mitochondrion	20.3	21.7
Os08t0248400-01	Rice	mitochondrion	18.03	21.59
TraesCS6B01G127200.1	Wheat	cytosol	14.04	21.51
OQU88594	Sorghum	cytosol	21.25	21.46
TraesCS6A01G015000.1	Wheat	mitochondrion	16.7	21.2
Os10t0497366-00	Rice	mitochondrion	16.13	21.2
TraesCS6B01G129200.1	Wheat	cytosol, nucleus, plastid	20.3	21.19
TraesCS2B01G560000.1	Wheat	mitochondrion, plastid	17.65	21.18
TraesCS6A01G099300.1	Wheat	cytosol, mitochondrion	19.35	21.07
TraesCS6D01G083100.1	Wheat	cytosol	19.54	21.02
TraesCS6B01G127500.1	Wheat	cytosol	19.35	20.82
EER95949	Sorghum	mitochondrion	26.19	20.81
HORVU1Hr1G018190.2	Barley	cytosol	11.2	20.7
TraesCSU01G089700.1	Wheat	mitochondrion	18.79	20.54
Os08t0107800-01	Rice	mitochondrion	24.1	20.35
Os10t0499500-01	Rice	mitochondrion	19.17	19.96
TraesCS6B01G127400.1	Wheat	cytosol, mitochondrion	16.32	19.86
TraesCS1B01G038200.1	Wheat	mitochondrion	23.72	19.75
TraesCS1D01G058400.1	Wheat	cytosol	19.17	19.61
TraesCS1B01G072700.1	Wheat	cytosol	18.98	19.61
TraesCS7B01G469500.1	Wheat	cytosol	20.87	19.57
TraesCS7D01G231400.1	Wheat	cytosol, plastid	14.8	19.35
TraesCS1D01G068600.1	Wheat	plastid	12.33	19.12
TraesCS6A01G083000.1	Wheat	cytosol	16.51	19.08
TraesCSU01G090200.1	Wheat	cytosol	15.94	19.0
TraesCS6D01G076500.1	Wheat	plastid	16.32	18.98
TraesCS1B01G315500.1	Wheat	mitochondrion	11.39	18.69
TraesCS1B01G072300.1	Wheat	plastid	20.11	18.66
TraesCS1B01G086000.1	Wheat	plastid	24.1	18.51
TraesCSU01G089800.1	Wheat	mitochondrion	12.14	18.23
TraesCS1A01G031700.1	Wheat	plastid	25.62	18.22
TraesCS1D01G069100.1	Wheat	mitochondrion	22.2	18.2
TraesCS6B01G021200.1	Wheat	cytosol, mitochondrion	11.2	18.15
TraesCS1D01G075800.1	Wheat	mitochondrion, plastid	11.76	18.13
OQU82856	Sorghum	cytosol	25.62	17.95
EES09203	Sorghum	cytosol	26.95	17.79
TraesCS6D01G017700.1	Wheat	plastid	18.03	17.79
KXG27690	Sorghum	cytosol, plastid	24.67	17.78
Os10t0495200-01	Rice	mitochondrion	26.38	17.77
TraesCS5B01G250800.1	Wheat	cytosol, mitochondrion	24.1	17.76
TraesCS6D01G017800.1	Wheat	cytosol	18.03	17.69
TraesCS1A01G031600.1	Wheat	cytosol	22.2	17.67
TraesCS6D01G047700.1	Wheat	mitochondrion	23.15	17.66
HORVU6Hr1G014310.1	Barley	mitochondrion	22.96	17.61
TraesCS6B01G021600.1	Wheat	mitochondrion	23.91	17.6
KXG35774	Sorghum	cytosol, mitochondrion	15.75	17.55
HORVU0Hr1G035310.1	Barley	cytosol	19.35	17.53
TraesCS6B01G114300.1	Wheat	cytosol	12.9	17.48
Os08t0107700-01	Rice	cytosol, mitochondrion	12.33	17.38
HORVU2Hr1G105460.11	Barley	mitochondrion, plastid	15.75	17.29
KXG28799	Sorghum	plastid	24.86	17.24
TraesCS1B01G092600.1	Wheat	plastid	16.89	17.21
TraesCS6B01G045200.1	Wheat	cytosol, mitochondrion	23.34	17.2
OQU82823	Sorghum	cytosol	26.0	17.19
OQU82827	Sorghum	cytosol	26.0	17.19
TraesCS1D01G032300.1	Wheat	mitochondrion, plastid	25.81	17.17
HORVU7Hr1G029840.1	Barley	cytosol, mitochondrion	22.77	17.17
TraesCS2D01G533000.1	Wheat	cytosol, extracellular	21.44	17.15
Os10t0497300-01	Rice	mitochondrion	25.81	17.13
TraesCS1B01G072400.1	Wheat	cytosol	22.58	17.12
TraesCS1A01G073800.1	Wheat	mitochondrion	10.82	17.12
Zm00001d007534_P001	Maize	plastid	25.24	17.12
TraesCS6D01G290900.1	Wheat	mitochondrion	23.72	17.05
TraesCS1B01G075000.1	Wheat	cytosol, mitochondrion	21.44	17.02
OQU82831	Sorghum	cytosol	19.73	16.97
TraesCS2A01G531000.1	Wheat	golgi	21.82	16.94
OQU80148	Sorghum	mitochondrion	23.34	16.92
EES07882	Sorghum	cytosol	24.86	16.86
TraesCS1B01G073200.1	Wheat	cytosol	9.68	16.83
TraesCS6A01G014800.1	Wheat	cytosol, mitochondrion	22.77	16.81
Zm00001d007555_P001	Maize	plastid	25.81	16.71
TraesCS7D01G487500.1	Wheat	cytosol, mitochondrion	22.58	16.64
TraesCS1B01G038400.1	Wheat	cytosol	19.17	16.61
TraesCS1B01G039700.1	Wheat	cytosol	19.17	16.61
Zm00001d009733_P001	Maize	cytosol	25.05	16.6
TraesCS2D01G532600.1	Wheat	plastid	24.29	16.49
TraesCS2A01G530600.1	Wheat	cytosol	23.91	16.47
TraesCS1B01G038500.1	Wheat	mitochondrion	24.67	16.46
TraesCS1D01G033100.1	Wheat	mitochondrion, plastid	24.48	16.39
TraesCS1D01G068500.1	Wheat	mitochondrion	25.24	16.38
TraesCS2D01G532400.1	Wheat	cytosol	18.98	16.37
TraesCS1B01G039100.1	Wheat	mitochondrion	24.29	16.35
TraesCS2B01G560700.1	Wheat	plastid	23.91	16.34
TraesCS2D01G532300.1	Wheat	plastid	24.1	16.32
TraesCS1A01G054500.1	Wheat	mitochondrion	24.1	16.28
TraesCS2B01G560300.1	Wheat	cytosol	17.46	16.17
HORVU1Hr1G004750.6	Barley	plastid	24.48	16.17
Zm00001d007559_P001	Maize	plastid	25.05	16.16
TraesCS1A01G067600.1	Wheat	mitochondrion	24.86	16.11
TraesCS6B01G021500.1	Wheat	cytosol, mitochondrion	11.57	16.09
Zm00001d007548_P001	Maize	plastid	24.86	16.09
TraesCS1B01G075300.1	Wheat	cytosol	18.22	16.08
TraesCS2B01G559900.1	Wheat	cytosol	16.51	16.05
TraesCS2D01G532500.1	Wheat	plastid	20.68	16.03
TraesCS1B01G074600.1	Wheat	mitochondrion, plastid	23.72	16.03
TraesCS1A01G057300.1	Wheat	cytosol	21.82	16.02
TraesCS1B01G073100.1	Wheat	cytosol	18.41	16.01
TraesCS2A01G531100.1	Wheat	cytosol	17.27	15.99
TraesCS1D01G057800.1	Wheat	mitochondrion	11.01	15.98
Zm00001d007531_P001	Maize	plastid	24.67	15.97
HORVU1Hr1G011020.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	19.35	15.96
TraesCS1B01G085400.1	Wheat	cytosol	19.35	15.91
TraesCS2A01G526200.1	Wheat	golgi	20.49	15.86
TraesCS1D01G068800.1	Wheat	plastid	24.48	15.81
TraesCS1A01G054700.2	Wheat	mitochondrion	24.29	15.76
KXG19780	Sorghum	cytosol	17.65	15.74
TraesCS1D01G055300.1	Wheat	cytosol	18.41	15.7
TraesCS1B01G039200.1	Wheat	mitochondrion	23.15	15.56
TraesCS1D01G068900.1	Wheat	mitochondrion	23.91	15.5
HORVU1Hr1G010970.1	Barley	mitochondrion	24.29	15.5
TraesCS1D01G058200.1	Wheat	extracellular, mitochondrion	20.49	15.49
TraesCS1D01G056700.1	Wheat	cytosol	17.84	15.49
TraesCS1B01G085900.1	Wheat	mitochondrion	23.91	15.48
TraesCS2D01G532100.1	Wheat	mitochondrion	20.3	15.46
TraesCS1D01G055500.1	Wheat	cytosol, mitochondrion	19.73	15.45
TraesCS1D01G068400.1	Wheat	mitochondrion	24.1	15.43
TraesCS6A01G014500.1	Wheat	cytosol, mitochondrion	7.4	15.41
TraesCS1A01G067400.1	Wheat	mitochondrion	24.1	15.39
TraesCS1D01G056200.1	Wheat	mitochondrion	24.1	15.39
HORVU0Hr1G031920.1	Barley	plastid	25.05	15.35
Os08t0110200-01	Rice	mitochondrion	23.15	15.29
TraesCS1B01G071600.1	Wheat	mitochondrion	24.48	15.21
TraesCS1D01G076500.1	Wheat	mitochondrion	19.17	15.21
TraesCS6A01G014600.1	Wheat	cytosol	11.39	15.19
HORVU1Hr1G014040.1	Barley	mitochondrion	23.91	15.13
TraesCS1B01G092500.1	Wheat	mitochondrion	22.39	15.07
HORVU1Hr1G014030.2	Barley	mitochondrion, plastid	23.72	15.06
TraesCS1B01G085300.1	Wheat	mitochondrion	22.58	15.03
TraesCS1B01G072900.2	Wheat	mitochondrion	24.86	15.01
HORVU6Hr1G002890.6	Barley	cytosol, plastid	22.58	14.97
TraesCS1D01G076900.1	Wheat	plastid	18.6	14.92
TraesCS1D01G056600.1	Wheat	mitochondrion	5.69	14.85
HORVU1Hr1G011150.1	Barley	cytosol, plastid	24.86	14.84
HORVU1Hr1G010890.5	Barley	cytosol	25.24	14.81
HORVU1Hr1G013810.1	Barley	plastid	23.53	14.78
TraesCS1A01G054800.1	Wheat	cytosol	16.32	14.78
TraesCS6A01G311600.1	Wheat	mitochondrion	23.34	14.71
HORVU6Hr1G076780.7	Barley	mitochondrion	22.96	14.68
Os10t0497432-01	Rice	mitochondrion	7.4	14.66
Os04t0350000-02	Rice	cytosol, mitochondrion, plastid	21.25	14.62
TraesCS1D01G068700.1	Wheat	cytosol	12.14	14.58
OQU82836	Sorghum	cytosol	16.89	14.54
HORVU1Hr1G011160.2	Barley	cytosol, plastid	24.67	14.53
HORVU1Hr1G014060.1	Barley	plastid	24.48	14.49
TraesCS1A01G067000.1	Wheat	mitochondrion	19.54	14.39
HORVU1Hr1G011300.3	Barley	plastid	25.05	14.35
TraesCS1A01G055800.1	Wheat	mitochondrion	20.49	14.01
Os04t0349600-01	Rice	plastid	10.25	13.95
TraesCS1A01G055500.1	Wheat	mitochondrion	5.69	13.82
TraesCS1A01G074000.1	Wheat	mitochondrion	7.4	13.78
OQU82833	Sorghum	cytosol	11.57	13.62
TraesCS1D01G076800.1	Wheat	cytosol, mitochondrion	5.88	13.6
Zm00001d009735_P001	Maize	cytosol	25.05	13.57
TraesCS1B01G084800.1	Wheat	cytosol	11.76	13.36
TraesCS1A01G057400.1	Wheat	mitochondrion, plastid	17.84	13.11
TraesCS1A01G073700.1	Wheat	cytosol	9.49	12.99
Os04t0351333-00	Rice	cytosol	21.06	12.63
TraesCS1D01G076700.1	Wheat	cytosol	7.97	12.57
TraesCS1D01G058500.1	Wheat	plastid	13.28	12.28
TraesCS1A01G073600.1	Wheat	mitochondrion	8.92	11.99
OQU82834	Sorghum	cytosol	21.63	11.84
TraesCS1B01G038300.1	Wheat	plastid	11.95	11.54
TraesCS6B01G129100.1	Wheat	cytosol, plastid	6.26	11.46
TraesCS1A01G056000.1	Wheat	cytosol	8.73	11.44
TraesCS1D01G033000.1	Wheat	cytosol	8.73	11.39
TraesCS1A01G066600.1	Wheat	mitochondrion	5.5	11.03
TraesCS6B01G341800.2	Wheat	cytosol	8.16	10.78
HORVU1Hr1G011400.44	Barley	plastid	12.33	10.55
TraesCS1A01G067800.1	Wheat	cytosol	7.4	10.43
TraesCS1D01G067600.1	Wheat	cytosol	7.02	10.14
TraesCS1B01G038600.1	Wheat	cytosol	6.83	9.92
OQU88581	Sorghum	cytosol	19.35	9.38
TraesCS1D01G076400.1	Wheat	cytosol	6.26	9.09
TraesCS1A01G055600.1	Wheat	cytosol	4.55	7.38
TraesCS1D01G057700.1	Wheat	cytosol	4.36	7.08
TraesCS2D01G532200.1	Wheat	cytosol	3.42	6.14

Protein Annotations

Gene3D:1.25.40.10	MapMan:35.1	EntrezGene:834119	ProteinID:AED94650.1	ProteinID:ANM68456.1	ArrayExpress:AT5G41170
EnsemblPlantsGene:AT5G41170	RefSeq:AT5G41170	TAIR:AT5G41170	RefSeq:AT5G41170-TAIR-G	EnsemblPlants:AT5G41170.1	TAIR:AT5G41170.1
Unigene:At.49775	ProteinID:BAB09719.1	EMBL:BT023465	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003824	GO:GO:0004518	GO:GO:0004519	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139	GO:GO:0006397
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0080156	GO:GO:0090305
InterPro:IPR002885	InterPro:IPR011990	RefSeq:NP_001330211.1	RefSeq:NP_198933.1	PFAM:PF12854	PFAM:PF13041
PO:PO:0000084	PO:PO:0000293	PO:PO:0007057	PO:PO:0007611	PO:PO:0009046	PO:PO:0009047
PFscan:PS51375	PANTHER:PTHR44149	PANTHER:PTHR44149:SF3	InterPro:Pentatricopeptide_repeat	UniProt:Q9FLL3	TIGRFAMs:TIGR00756
InterPro:TPR-like_helical_dom_sf	UniParc:UPI00000AB20B	SEG:seg	:	:	:

Description

Pentatricopeptide repeat-containing protein At5g41170, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9FLL3]

Coordinates

chr5:-:16478486..16480584

Molecular Weight (calculated)

59965.1 Da

IEP (calculated)

8.501

GRAVY (calculated)

0.041

Length

527 amino acids

Sequence
(BLAST)

001: MAMRFFQLHR NRLVKGNSGK ALSFSRLLDL SFWVRAFCNY REILRNGLHS LQFNEALDLF THMVESRPLP SIIDFTKLLN VIAKMKKFDV VINLCDHLQI
101: MGVSHDLYTC NLLMNCFCQS SQPYLASSFL GKMMKLGFEP DIVTFTSLIN GFCLGNRMEE AMSMVNQMVE MGIKPDVVMY TTIIDSLCKN GHVNYALSLF
201: DQMENYGIRP DVVMYTSLVN GLCNSGRWRD ADSLLRGMTK RKIKPDVITF NALIDAFVKE GKFLDAEELY NEMIRMSIAP NIFTYTSLIN GFCMEGCVDE
301: ARQMFYLMET KGCFPDVVAY TSLINGFCKC KKVDDAMKIF YEMSQKGLTG NTITYTTLIQ GFGQVGKPNV AQEVFSHMVS RGVPPNIRTY NVLLHCLCYN
401: GKVKKALMIF EDMQKREMDG VAPNIWTYNV LLHGLCYNGK LEKALMVFED MRKREMDIGI ITYTIIIQGM CKAGKVKNAV NLFCSLPSKG VKPNVVTYTT
501: MISGLFREGL KHEAHVLFRK MKEDGVS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.