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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, extracellular

Predictor Summary:
  • mitochondrion 3
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G058400.1 Wheat cytosol 63.27 85.63
TraesCS1D01G057700.1 Wheat cytosol 38.02 81.54
TraesCS1D01G058000.1 Wheat cytosol 46.77 80.3
TraesCS1B01G075000.1 Wheat cytosol, mitochondrion 75.47 79.22
TraesCS1D01G055300.1 Wheat cytosol 66.28 74.76
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 70.3 72.81
TraesCS1D01G056700.1 Wheat cytosol 63.13 72.49
TraesCS1D01G068700.1 Wheat cytosol 45.19 71.75
TraesCS1D01G076500.1 Wheat mitochondrion 68.29 71.69
TraesCS1D01G076700.1 Wheat cytosol 34.15 71.26
TraesCS1D01G058500.1 Wheat plastid 55.95 68.42
TraesCS1D01G067600.1 Wheat cytosol 35.01 66.85
TraesCS1D01G076400.1 Wheat cytosol 34.72 66.67
TraesCS1D01G056200.1 Wheat mitochondrion 76.04 64.24
TraesCS1D01G068800.1 Wheat plastid 71.45 61.03
TraesCS1D01G068900.1 Wheat mitochondrion 71.02 60.89
TraesCS1D01G068400.1 Wheat mitochondrion 71.59 60.63
TraesCS1D01G068500.1 Wheat mitochondrion 70.16 60.22
TraesCS1D01G033000.1 Wheat cytosol 34.0 58.66
TraesCS6D01G290900.1 Wheat mitochondrion 59.83 56.89
TraesCS2D01G533000.1 Wheat cytosol, extracellular 53.23 56.3
TraesCS2D01G532400.1 Wheat cytosol 49.07 55.97
TraesCS2D01G532200.1 Wheat cytosol 23.39 55.63
TraesCS1D01G069100.1 Wheat mitochondrion 50.22 54.43
TraesCS1D01G057800.1 Wheat mitochondrion 28.12 53.99
TraesCS2D01G532500.1 Wheat plastid 52.65 53.97
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 59.97 53.11
TraesCS2D01G532100.1 Wheat mitochondrion 52.65 53.03
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 58.68 51.64
KXG35774 Sorghum cytosol, mitochondrion 35.01 51.59
Zm00001d007548_P001 Maize plastid 58.54 50.12
Zm00001d007559_P001 Maize plastid 58.54 49.94
Zm00001d007531_P001 Maize plastid 58.25 49.88
Zm00001d007534_P001 Maize plastid 54.95 49.29
KXG28799 Sorghum plastid 53.66 49.21
Zm00001d007555_P001 Maize plastid 57.39 49.14
TraesCS1D01G076900.1 Wheat plastid 45.77 48.55
TraesCS6D01G083300.1 Wheat mitochondrion 30.85 48.21
TraesCS2D01G532600.1 Wheat plastid 52.94 47.55
TraesCS2D01G532300.1 Wheat plastid 52.8 47.3
TraesCS6D01G017800.1 Wheat cytosol 35.87 46.55
TraesCS6D01G017700.1 Wheat plastid 35.01 45.69
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 48.64 44.26
TraesCS6D01G083400.1 Wheat mitochondrion 30.99 43.81
TraesCS6D01G083100.1 Wheat cytosol 30.27 43.06
TraesCS1D01G068600.1 Wheat plastid 20.8 42.65
TraesCS7D01G231400.1 Wheat cytosol, plastid 24.1 41.69
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 28.69 41.58
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 42.04 40.98
Os04t0351333-00 Rice cytosol 51.08 40.5
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 19.66 40.06
TraesCS6D01G047700.1 Wheat mitochondrion 34.29 34.59
TraesCS6D01G076500.1 Wheat plastid 22.38 34.44
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 10.47 32.02
Solyc06g007280.2.1 Tomato cytosol 11.48 31.37
Os04t0349600-01 Rice plastid 16.79 30.23
Bra027636.1-P Field mustard cytosol 13.77 29.63
PGSC0003DMT400008759 Potato cytosol 13.49 29.47
PGSC0003DMT400052977 Potato cytosol 16.36 29.31
KRH39057 Soybean cytosol 20.8 29.18
Solyc06g007810.1.1 Tomato cytosol 11.19 29.1
KRH39004 Soybean cytosol 20.66 28.97
KRH39072 Soybean cytosol 20.52 28.83
KRH39054 Soybean cytosol 20.52 28.77
KRH39074 Soybean cytosol 20.52 28.77
KRH39112 Soybean cytosol 20.52 28.77
Solyc06g005220.2.1 Tomato cytosol 16.64 28.57
VIT_14s0081g00110.t01 Wine grape cytosol 20.09 28.51
TraesCS1D01G056600.1 Wheat mitochondrion 8.18 28.22
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 20.37 28.12
Bra026884.1-P Field mustard cytosol 18.36 27.89
VIT_12s0028g02320.t01 Wine grape mitochondrion 18.51 27.04
KRH08636 Soybean cytosol 20.09 26.82
Bra026882.1-P Field mustard cytosol 20.52 26.78
PGSC0003DMT400025067 Potato cytosol 17.93 26.26
KRH09082 Soybean cytosol 15.35 26.23
KRH08671 Soybean cytosol, mitochondrion 20.66 26.04
KRH25652 Soybean cytosol, golgi 20.09 25.93
KRH39066 Soybean cytosol 20.52 25.77
KRH08607 Soybean cytosol 20.66 25.67
KRH09084 Soybean plastid 18.79 25.64
KRH17148 Soybean mitochondrion 19.94 25.5
KRH48615 Soybean mitochondrion 19.94 25.5
PGSC0003DMT400008757 Potato cytosol 18.22 25.5
KRH08639 Soybean mitochondrion, plastid 20.66 25.49
Bra006187.1-P Field mustard plastid 10.62 25.43
PGSC0003DMT400025087 Potato endoplasmic reticulum 17.93 25.25
KRH09154 Soybean mitochondrion 20.09 25.18
AT1G63330.2 Thale cress cytosol 20.09 25.04
KRH40400 Soybean plastid 20.52 24.78
KRH08277 Soybean plastid 20.09 24.69
KRH08628 Soybean plastid 19.51 24.64
Bra031731.1-P Field mustard mitochondrion 17.79 24.41
VIT_14s0081g00120.t01 Wine grape plastid 20.37 24.36
CDX68679 Canola cytosol 4.02 24.35
KRH31646 Soybean cytosol 18.08 24.32
KRH08625 Soybean plastid 20.09 24.31
Bra036649.1-P Field mustard cytosol 13.63 24.3
Bra027029.1-P Field mustard mitochondrion 8.46 24.28
Solyc06g007740.1.1 Tomato cytosol 20.52 24.24
KRH09121 Soybean mitochondrion 18.51 24.16
Bra026971.1-P Field mustard mitochondrion 21.66 24.01
PGSC0003DMT400025074 Potato cytosol 18.79 23.73
PGSC0003DMT400053185 Potato mitochondrion 20.09 23.73
AT1G12300.1 Thale cress mitochondrion 21.66 23.7
KRH40513 Soybean plastid 11.91 23.65
KRH41817 Soybean mitochondrion 18.65 23.42
Bra026958.1-P Field mustard mitochondrion 21.38 23.39
VIT_14s0030g02260.t01 Wine grape cytosol 14.78 23.25
Bra016762.1-P Field mustard mitochondrion 20.23 23.23
AT1G62930.1 Thale cress plastid 20.95 23.21
AT1G12620.1 Thale cress cytosol, mitochondrion 20.66 23.19
AT1G62670.1 Thale cress mitochondrion 20.95 23.17
PGSC0003DMT400056665 Potato mitochondrion 19.51 23.09
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 17.36 23.05
AT5G16640.1 Thale cress mitochondrion 16.64 23.02
PGSC0003DMT400056663 Potato plastid 19.37 22.96
AT3G22470.1 Thale cress cytosol, mitochondrion 20.37 22.94
PGSC0003DMT400052971 Potato mitochondrion 19.51 22.93
AT1G63070.1 Thale cress mitochondrion 19.37 22.88
AT1G63130.1 Thale cress mitochondrion 20.66 22.86
VIT_14s0081g00280.t01 Wine grape mitochondrion 20.95 22.85
Bra027658.1-P Field mustard cytosol, mitochondrion 17.79 22.84
AT1G12775.1 Thale cress cytosol, mitochondrion 21.09 22.83
Solyc06g007300.1.1 Tomato extracellular 19.37 22.8
VIT_14s0081g00270.t01 Wine grape plastid 18.94 22.76
KRH39050 Soybean mitochondrion 17.36 22.74
Bra028267.1-P Field mustard mitochondrion 20.37 22.68
Bra026836.1-P Field mustard cytosol, mitochondrion 15.78 22.4
AT1G62590.1 Thale cress mitochondrion 20.37 22.4
PGSC0003DMT400053182 Potato cytosol 19.23 22.37
AT1G62910.1 Thale cress mitochondrion 20.23 22.31
AT1G63150.1 Thale cress mitochondrion 19.94 22.1
PGSC0003DMT400008760 Potato mitochondrion 18.51 22.01
Bra026954.1-P Field mustard mitochondrion 20.52 22.0
VIT_14s0030g02280.t01 Wine grape plastid 17.65 21.93
AT1G12700.2 Thale cress cytosol 19.23 21.68
Bra036651.1-P Field mustard mitochondrion 16.64 21.68
AT1G63400.1 Thale cress cytosol, plastid 17.93 21.66
AT1G63080.3 Thale cress mitochondrion 19.08 21.66
AT1G64580.1 Thale cress mitochondrion 16.21 21.61
KRH09095 Soybean plastid 18.08 21.54
KRH09097 Soybean plastid 17.93 21.44
Bra021192.1-P Field mustard plastid 15.49 21.43
Bra026957.1-P Field mustard mitochondrion 18.51 21.39
Bra025516.1-P Field mustard cytosol, mitochondrion 14.63 21.38
Solyc04g080120.1.1 Tomato extracellular 18.65 21.24
AT1G62914.1 Thale cress mitochondrion 16.07 21.21
AT3G16710.1 Thale cress mitochondrion 15.35 21.1
KRH08599 Soybean cytosol, plastid 20.23 21.08
AT1G64583.1 Thale cress mitochondrion 15.35 20.9
Bra027026.1-P Field mustard mitochondrion 15.64 20.84
AT1G06580.1 Thale cress mitochondrion 14.78 20.6
AT5G41170.1 Thale cress mitochondrion 15.49 20.49
PGSC0003DMT400015293 Potato mitochondrion 17.79 20.33
PGSC0003DMT400015298 Potato mitochondrion 17.79 20.33
PGSC0003DMT400053556 Potato mitochondrion 13.34 20.26
AT1G62680.2 Thale cress plastid 15.93 20.26
AT1G62720.1 Thale cress mitochondrion 13.49 19.38
AT1G64100.2 Thale cress cytosol 22.24 19.23
KRH12873 Soybean cytosol 18.65 18.68
KRH09085 Soybean mitochondrion 18.79 18.61
AT4G26800.2 Thale cress mitochondrion, plastid 13.63 18.48
Bra026401.1-P Field mustard plastid 14.06 18.32
Bra027726.1-P Field mustard mitochondrion 11.76 17.41
Bra027656.1-P Field mustard cytosol 23.39 17.32
KRH39064 Soybean cytosol 20.95 15.07
Bra016758.1-P Field mustard plastid 20.66 12.42
Protein Annotations
EnsemblPlants:TraesCS1D01G058200.1EnsemblPlantsGene:TraesCS1D01G058200Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF874
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segTIGRFAMs:TIGR00756
MapMan:35.1:::::
Description
No Description!
Coordinates
chr1D:-:38365595..38367688
Molecular Weight (calculated)
76632.3 Da
IEP (calculated)
7.838
GRAVY (calculated)
0.167
Length
697 amino acids
Sequence
(BLAST)
001: MGCFCGARRP DLGLALFGHF LRTGLKTNKI VATTFLKCLC CAKRTDEAVN VLLHRMPELG CVPDAFSYSI VLKSLCENSM SQRALDLLQM VAKGGDACSV
101: NVVAYNTVIH GFFKEGETGK ACNLFHEMIH QGVVPDVVTF NSIIHALCKA RAMDKAEIVL RQMVDNGAQP NEVTYNCMIH GYSKSGQLRE GTKMLRKMTT
201: RGLIPDIVTC SSLMTSLCKH GRSKEALDIF CSMTAKGLKP NIIAYSILLH GYATEGCFVD MINLFNSMED NGIAANCYVF NILIDAYAKH GMMGEAMLIF
301: TEMREKGVSP DVVTYSTVIA AFCRLRRLAD AMDKFNEMTD MGVQPDTTVY HSLIQGFCMH GDLVKAKGLV SEMTNKGIPR PDIAFFSSII NTLCKEGRVM
401: DAQDIFEMVI SIDGRPDVIT FSSLIDGYGL VGQMGKALGV LDAMVSAGIE PDVVTYSSLL DGYCRNGRIN DALILFREMP RKRIKPNTVT YGIILDGLFR
501: AGRTVDARKM FHEMIERGIT VSISICNIIL GGLCRNNCAD EAIALFQKLG AMNVKFNIIT LNAMINAMFK VRRREEANDL FAAISASGLV PNASTYGIMI
601: KNILKEGSVE EVDSMFSSME KSGIIPNSCL INIIIRMLLE KGEIAKAGNY LSKVDGKVIS LEASTTSLLL SLFSRKGKYR ESIELLPANY QFFDGFG
Best Arabidopsis Sequence Match ( AT1G12620.1 )
(BLAST)
001: MRGLIQTRLL ETGTLRTALF LSCYGRVFSS VSDGKGKVSY RERLRSGIVD IKEDDAVDLF QEMTRSRPRP RLIDFSRLFS VVARTKQYDL VLDLCKQMEL
101: KGIAHNLYTL SIMINCCCRC RKLSLAFSAM GKIIKLGYEP DTVTFSTLIN GLCLEGRVSE ALELVDRMVE MGHKPTLITL NALVNGLCLN GKVSDAVLLI
201: DRMVETGFQP NEVTYGPVLK VMCKSGQTAL AMELLRKMEE RKIKLDAVKY SIIIDGLCKD GSLDNAFNLF NEMEIKGFKA DIIIYTTLIR GFCYAGRWDD
301: GAKLLRDMIK RKITPDVVAF SALIDCFVKE GKLREAEELH KEMIQRGISP DTVTYTSLID GFCKENQLDK ANHMLDLMVS KGCGPNIRTF NILINGYCKA
401: NLIDDGLELF RKMSLRGVVA DTVTYNTLIQ GFCELGKLEV AKELFQEMVS RRVRPDIVSY KILLDGLCDN GEPEKALEIF EKIEKSKMEL DIGIYNIIIH
501: GMCNASKVDD AWDLFCSLPL KGVKPDVKTY NIMIGGLCKK GSLSEADLLF RKMEEDGHSP NGCTYNILIR AHLGEGDATK SAKLIEEIKR CGFSVDASTV
601: KMVVDMLSDG RLKKSFLDML S
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12620 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASZ8]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.