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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G62670.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT1G62670.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G057700.1 Wheat cytosol 41.4 72.62
TraesCS1D01G056600.1 Wheat mitochondrion 25.44 71.78
TraesCS1D01G076800.1 Wheat cytosol, mitochondrion 26.32 65.79
TraesCS1D01G067600.1 Wheat cytosol 36.84 57.53
TraesCS2D01G532200.1 Wheat cytosol 29.3 57.0
TraesCS1D01G068700.1 Wheat cytosol 43.33 56.26
TraesCS1D01G058200.1 Wheat extracellular, mitochondrion 68.42 55.95
TraesCS1D01G056200.1 Wheat mitochondrion 76.14 52.61
TraesCS1D01G068900.1 Wheat mitochondrion 74.39 52.15
TraesCS1D01G076700.1 Wheat cytosol 30.53 52.1
TraesCS1D01G076500.1 Wheat mitochondrion 59.47 51.05
TraesCS1D01G068800.1 Wheat plastid 72.46 50.61
TraesCS1D01G068500.1 Wheat mitochondrion 71.93 50.49
TraesCS1D01G068400.1 Wheat mitochondrion 72.63 50.3
TraesCS1D01G058400.1 Wheat cytosol 45.44 50.29
TraesCS1D01G055500.1 Wheat cytosol, mitochondrion 59.3 50.22
TraesCS1D01G057800.1 Wheat mitochondrion 31.58 49.59
TraesCS1D01G076400.1 Wheat cytosol 31.58 49.59
TraesCS1D01G033000.1 Wheat cytosol 34.39 48.51
TraesCS1D01G069100.1 Wheat mitochondrion 51.75 45.88
TraesCS1D01G055300.1 Wheat cytosol 49.65 45.79
TraesCS6D01G290900.1 Wheat mitochondrion 58.25 45.29
TraesCS1D01G076900.1 Wheat plastid 51.75 44.9
TraesCS1D01G056700.1 Wheat cytosol 46.84 43.99
KXG28799 Sorghum plastid 58.42 43.82
TraesCS1D01G075800.1 Wheat mitochondrion, plastid 25.79 42.98
TraesCS1D01G033100.1 Wheat mitochondrion, plastid 58.25 42.19
Zm00001d007548_P001 Maize plastid 60.0 42.01
Zm00001d007555_P001 Maize plastid 59.82 41.89
Zm00001d007559_P001 Maize plastid 60.0 41.86
Zm00001d007531_P001 Maize plastid 59.3 41.52
TraesCS2D01G532600.1 Wheat plastid 56.49 41.49
TraesCS1D01G068600.1 Wheat plastid 24.74 41.47
Zm00001d007534_P001 Maize plastid 55.44 40.67
TraesCS1D01G032300.1 Wheat mitochondrion, plastid 56.32 40.53
TraesCS2D01G532300.1 Wheat plastid 54.39 39.85
TraesCS1D01G058000.1 Wheat cytosol 26.84 37.68
TraesCS2D01G533000.1 Wheat cytosol, extracellular 43.33 37.48
TraesCS2D01G532500.1 Wheat plastid 44.21 37.06
TraesCS2D01G532100.1 Wheat mitochondrion 44.56 36.71
TraesCS2D01G532400.1 Wheat cytosol 39.3 36.66
Os04t0350000-02 Rice cytosol, mitochondrion, plastid 45.44 33.81
TraesCS7D01G231400.1 Wheat cytosol, plastid 22.81 32.26
Os04t0351333-00 Rice cytosol 48.07 31.17
KXG35774 Sorghum cytosol, mitochondrion 25.61 30.87
TraesCS7D01G487500.1 Wheat cytosol, mitochondrion 37.37 29.79
TraesCS6D01G089500.1 Wheat cytosol, mitochondrion, plastid 25.09 29.73
TraesCS6D01G083100.1 Wheat cytosol 25.09 29.18
TraesCS6D01G083400.1 Wheat mitochondrion 25.09 29.01
TraesCS6D01G083300.1 Wheat mitochondrion 22.11 28.25
TraesCS6D01G017700.1 Wheat plastid 25.79 27.53
TraesCS6D01G017800.1 Wheat cytosol 25.79 27.37
CDX68679 Canola cytosol 4.74 23.48
TraesCS6D01G047700.1 Wheat mitochondrion 28.42 23.44
TraesCS6D01G076500.1 Wheat plastid 17.89 22.52
Os04t0349600-01 Rice plastid 15.09 22.22
Solyc06g007810.1.1 Tomato cytosol 8.95 19.03
KRH39054 Soybean cytosol 15.79 18.11
KRH09084 Soybean plastid 15.96 17.81
KRH39057 Soybean cytosol 15.44 17.71
KRH39074 Soybean cytosol 15.44 17.71
KRH39004 Soybean cytosol 15.09 17.3
KRH39112 Soybean cytosol 15.09 17.3
KRH39072 Soybean cytosol 14.91 17.14
AT1G63330.2 Thale cress cytosol 16.67 16.99
AT1G63130.1 Thale cress mitochondrion 18.77 16.98
KRH17148 Soybean mitochondrion 16.14 16.88
AT1G62930.1 Thale cress plastid 18.6 16.85
Bra026882.1-P Field mustard cytosol 15.61 16.67
AT1G63070.1 Thale cress mitochondrion 17.19 16.61
AT1G62670.1 Thale cress mitochondrion 18.25 16.51
AT1G12300.1 Thale cress mitochondrion 18.07 16.17
KRH09154 Soybean mitochondrion 15.61 16.01
KRH08625 Soybean plastid 16.14 15.97
AT1G63150.1 Thale cress mitochondrion 17.54 15.9
KRH39066 Soybean cytosol 15.44 15.86
Bra026958.1-P Field mustard mitochondrion 17.72 15.86
Bra006187.1-P Field mustard plastid 8.07 15.81
AT1G62590.1 Thale cress mitochondrion 17.54 15.77
KRH08277 Soybean plastid 15.61 15.7
AT1G12775.1 Thale cress cytosol, mitochondrion 17.72 15.68
Bra026836.1-P Field mustard cytosol, mitochondrion 13.51 15.68
PGSC0003DMT400008759 Potato cytosol 8.77 15.67
AT1G62910.1 Thale cress mitochondrion 17.37 15.66
AT1G12620.1 Thale cress cytosol, mitochondrion 17.02 15.62
Bra026971.1-P Field mustard mitochondrion 17.19 15.58
KRH08628 Soybean plastid 15.09 15.58
KRH08639 Soybean mitochondrion, plastid 15.44 15.58
AT3G22470.1 Thale cress cytosol, mitochondrion 16.84 15.51
Bra028267.1-P Field mustard mitochondrion 17.02 15.5
KRH48615 Soybean mitochondrion 14.74 15.41
KRH08671 Soybean cytosol, mitochondrion 14.91 15.37
KRH08636 Soybean cytosol 14.04 15.33
Bra027658.1-P Field mustard cytosol, mitochondrion 14.56 15.29
KRH09121 Soybean mitochondrion 14.21 15.17
AT1G63400.1 Thale cress cytosol, plastid 15.26 15.08
KRH31646 Soybean cytosol 13.68 15.06
AT1G63080.3 Thale cress mitochondrion 16.14 14.98
Bra031731.1-P Field mustard mitochondrion 13.33 14.96
VIT_14s0081g00120.t01 Wine grape plastid 15.26 14.92
Bra021192.1-P Field mustard plastid 13.16 14.88
KRH09095 Soybean plastid 15.26 14.87
PGSC0003DMT400025074 Potato cytosol 14.39 14.86
KRH08635 Soybean cytosol, golgi, mitochondrion, plastid 13.16 14.85
VIT_14s0081g00270.t01 Wine grape plastid 15.09 14.83
Bra016762.1-P Field mustard mitochondrion 15.79 14.83
KRH09097 Soybean plastid 15.09 14.75
Solyc06g007740.1.1 Tomato cytosol 15.26 14.75
KRH40400 Soybean plastid 14.91 14.73
AT1G12700.2 Thale cress cytosol 15.96 14.72
VIT_12s0028g02320.t01 Wine grape mitochondrion 12.28 14.68
PGSC0003DMT400008757 Potato cytosol 12.81 14.66
PGSC0003DMT400053185 Potato mitochondrion 15.09 14.58
Bra026954.1-P Field mustard mitochondrion 16.49 14.46
VIT_14s0081g00110.t01 Wine grape cytosol 12.46 14.46
VIT_14s0081g00280.t01 Wine grape mitochondrion 16.14 14.4
AT1G64100.2 Thale cress cytosol 20.18 14.27
AT5G16640.1 Thale cress mitochondrion 12.46 14.09
Solyc06g007300.1.1 Tomato extracellular 14.56 14.02
Bra027726.1-P Field mustard mitochondrion 11.58 14.01
KRH00678 Soybean endoplasmic reticulum, extracellular, plastid 12.81 13.9
KRH08607 Soybean cytosol 13.68 13.9
Solyc04g080120.1.1 Tomato extracellular 14.91 13.89
KRH41817 Soybean mitochondrion 13.51 13.87
Bra036651.1-P Field mustard mitochondrion 12.98 13.83
KRH25652 Soybean cytosol, golgi 12.98 13.7
PGSC0003DMT400053182 Potato cytosol 14.39 13.69
PGSC0003DMT400056663 Potato plastid 14.04 13.61
AT1G62914.1 Thale cress mitochondrion 12.46 13.45
PGSC0003DMT400025067 Potato cytosol 11.23 13.45
Bra026957.1-P Field mustard mitochondrion 14.21 13.43
PGSC0003DMT400056665 Potato mitochondrion 13.86 13.41
KRH39050 Soybean mitochondrion 12.46 13.35
Bra036649.1-P Field mustard cytosol 9.12 13.3
AT5G41170.1 Thale cress mitochondrion 12.28 13.28
AT3G16710.1 Thale cress mitochondrion 11.75 13.21
Bra025516.1-P Field mustard cytosol, mitochondrion 11.05 13.21
VIT_14s0030g02280.t01 Wine grape plastid 12.98 13.19
PGSC0003DMT400008760 Potato mitochondrion 13.51 13.14
PGSC0003DMT400015293 Potato mitochondrion 14.04 13.11
PGSC0003DMT400015298 Potato mitochondrion 14.04 13.11
AT1G64583.1 Thale cress mitochondrion 11.75 13.09
KRH09085 Soybean mitochondrion 16.14 13.07
Solyc06g005220.2.1 Tomato cytosol 9.3 13.05
Bra027026.1-P Field mustard mitochondrion 11.93 13.0
PGSC0003DMT400025087 Potato endoplasmic reticulum 11.23 12.93
PGSC0003DMT400052971 Potato mitochondrion 13.33 12.82
AT1G64580.1 Thale cress mitochondrion 11.75 12.81
AT1G62720.1 Thale cress mitochondrion 10.88 12.78
AT1G62680.2 Thale cress plastid 12.28 12.77
VIT_14s0030g02260.t01 Wine grape cytosol 9.65 12.42
Bra026401.1-P Field mustard plastid 11.58 12.34
Bra026884.1-P Field mustard cytosol 9.82 12.2
PGSC0003DMT400052977 Potato cytosol 8.25 12.08
AT1G06580.1 Thale cress mitochondrion 10.53 12.0
Bra027656.1-P Field mustard cytosol 18.95 11.48
KRH08599 Soybean cytosol, plastid 13.16 11.21
KRH40513 Soybean plastid 6.84 11.11
AT4G26800.2 Thale cress mitochondrion, plastid 10.0 11.09
Bra027636.1-P Field mustard cytosol 6.14 10.8
KRH09082 Soybean cytosol 7.72 10.78
Solyc06g007280.2.1 Tomato cytosol 4.74 10.59
PGSC0003DMT400053556 Potato mitochondrion 8.42 10.46
KRH39064 Soybean cytosol 17.19 10.11
KRH12873 Soybean cytosol 11.93 9.77
Bra016758.1-P Field mustard plastid 14.91 7.33
Bra027029.1-P Field mustard mitochondrion 2.98 7.0
Protein Annotations
EnsemblPlants:TraesCS1D01G058500.1EnsemblPlantsGene:TraesCS1D01G058500Gene3D:1.25.40.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR002885InterPro:IPR011990InterPro:Pentatricopeptide_repeatInterPro:TPR-like_helical_dom_sfPANTHER:PTHR24015PANTHER:PTHR24015:SF874
PFAM:PF01535PFAM:PF12854PFAM:PF13041PFscan:PS51375SEG:segTIGRFAMs:TIGR00756
MapMan:35.1:::::
Description
No Description!
Coordinates
chr1D:-:38581519..38584057
Molecular Weight (calculated)
63025.0 Da
IEP (calculated)
8.423
GRAVY (calculated)
0.046
Length
570 amino acids
Sequence
(BLAST)
001: MFHLLRRSSS STTTSPPSRS WSPHAAFAAA TERISAGTLS REDAHRLFDE LLRQATPVPS RSLNGFLAAL ARATSSAACI RDGRALAIAL FNRVCREQSG
101: PRVVPLTVHT YNILMDCCCR ASRPDLGLAF FARLLRTGLK TNEITANTFL KCLCYAKRTD EALNVLLHRM SELGCVPDAI SYNIVLKSLC EDSMSQRALD
201: LLQMMAKEGG GCSPNVVAYN TVIHGFFKEA DCHVFTILID AYAKRGMMDE AMLIFTEMRE KGGFCMLGDL VKVKEFVSEM MNKGMGERPN VIIFSSLIDG
301: YGLVGQMGKA LGVLDAMVSA GIEPNVVTYS SLLDGYCRNG RINDALILFR EMPHKRIKPD TVTYGIMLDG LFRAGRTVAA REMFHEMTER GIPVSISIYN
401: IILRGLCRNN CADEAIALFQ KLGARNVKFD IITLNTMINA MFKVRRREEA NDLFSAISAS GLVPNASTYG IMIENILKEG SVEEVDNMFS SMEKSGCAPN
501: SRLINYVIRM LLEKGEIARA GNYLSKVDGK IISLEASTTS LLLSLFSREG KYRENIELLP AKYQFFNGFG
Best Arabidopsis Sequence Match ( AT1G12300.1 )
(BLAST)
001: MVKLMIRRLS SQVSKFVQPR LLETGTLRIA LINCPNELSF CCERGFSAFS DRNLSYRERL RSGLVDIKAD DAIDLFRDMI HSRPLPTVID FSRLFSAIAK
101: TKQYDLVLAL CKQMELKGIA HNLYTLSIMI NCFCRCRKLC LAFSAMGKII KLGYEPNTIT FSTLINGLCL EGRVSEALEL VDRMVEMGHK PDLITINTLV
201: NGLCLSGKEA EAMLLIDKMV EYGCQPNAVT YGPVLNVMCK SGQTALAMEL LRKMEERNIK LDAVKYSIII DGLCKHGSLD NAFNLFNEME MKGITTNIIT
301: YNILIGGFCN AGRWDDGAKL LRDMIKRKIN PNVVTFSVLI DSFVKEGKLR EAEELHKEMI HRGIAPDTIT YTSLIDGFCK ENHLDKANQM VDLMVSKGCD
401: PNIRTFNILI NGYCKANRID DGLELFRKMS LRGVVADTVT YNTLIQGFCE LGKLNVAKEL FQEMVSRKVP PNIVTYKILL DGLCDNGESE KALEIFEKIE
501: KSKMELDIGI YNIIIHGMCN ASKVDDAWDL FCSLPLKGVK PGVKTYNIMI GGLCKKGPLS EAELLFRKME EDGHAPDGWT YNILIRAHLG DGDATKSVKL
601: IEELKRCGFS VDASTIKMVI DMLSDGRLKK SFLDMLS
Arabidopsis Description
Pentatricopeptide repeat-containing protein At1g12300, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q0WKV3]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.